BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017398
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003613721.1| F-box/LRR-repeat protein [Medicago truncatul...    59   2e-06
ref|XP_003607672.1| F-box family-10 [Medicago truncatula] gi|355...    57   5e-06
ref|XP_003551380.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g...    57   6e-06
ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatul...    56   8e-06
gb|ACZ74681.1| cyclin-like F-box [Phaseolus vulgaris]                  56   8e-06

>ref|XP_003613721.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355515056|gb|AES96679.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 703

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = -3

Query: 121 KDRFSNLPNTLMQYILSLIPTKDAVATSILSTRWKYLWT 5
           +D  S LP  ++ +ILSL+PTKDAV TSIL+T+WKYLWT
Sbjct: 28  EDMISELPEAVLLHILSLLPTKDAVRTSILATKWKYLWT 66


>ref|XP_003607672.1| F-box family-10 [Medicago truncatula] gi|355508727|gb|AES89869.1|
           F-box family-10 [Medicago truncatula]
          Length = 388

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -3

Query: 124 GKDRFSNLPNTLMQYILSLIPTKDAVATSILSTRWKYLW 8
           GKD  SNLP+ ++ +ILSL+P KDAV TSIL+ RWK LW
Sbjct: 15  GKDFISNLPDEILHHILSLLPAKDAVGTSILARRWKSLW 53


>ref|XP_003551380.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g00160-like [Glycine
           max]
          Length = 364

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 25/39 (64%), Positives = 31/39 (79%)
 Frame = -3

Query: 118 DRFSNLPNTLMQYILSLIPTKDAVATSILSTRWKYLWTS 2
           DR SNLP+ ++ +ILSL+PT  AVATS+LS RWK LW S
Sbjct: 3   DRISNLPDVVLSHILSLVPTNVAVATSVLSKRWKLLWRS 41


>ref|XP_003596625.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355485673|gb|AES66876.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 411

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 24/40 (60%), Positives = 32/40 (80%)
 Frame = -3

Query: 124 GKDRFSNLPNTLMQYILSLIPTKDAVATSILSTRWKYLWT 5
           G+D  SNLP+ ++  +LS +PTKDAV+TS+LS RW YLWT
Sbjct: 25  GQDLISNLPDHIIGCVLSFLPTKDAVSTSVLSKRWIYLWT 64


>gb|ACZ74681.1| cyclin-like F-box [Phaseolus vulgaris]
          Length = 367

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = -3

Query: 118 DRFSNLPNTLMQYILSLIPTKDAVATSILSTRWKYLWTS 2
           DR SNLP++++ Y+LS +PTK+ VATS+LS RW  LW S
Sbjct: 3   DRISNLPDSILCYVLSFLPTKEVVATSVLSKRWNLLWRS 41