BLASTX nr result

ID: Coptis24_contig00017390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017390
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76485.1| hypothetical protein VITISV_000801 [Vitis vinifera]   219   5e-55
ref|XP_002270560.1| PREDICTED: uncharacterized protein LOC100264...   218   7e-55
ref|XP_004147754.1| PREDICTED: uncharacterized protein LOC101216...   214   9e-54
ref|XP_002332207.1| predicted protein [Populus trichocarpa] gi|2...   214   1e-53
ref|XP_004161558.1| PREDICTED: uncharacterized protein LOC101224...   213   4e-53

>emb|CAN76485.1| hypothetical protein VITISV_000801 [Vitis vinifera]
          Length = 369

 Score =  219 bits (557), Expect = 5e-55
 Identities = 105/167 (62%), Positives = 131/167 (78%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3   LAVKLQEVPALSCFTLMMAFSEPLSLIPVKAFSFKNSDVLSWAFHDSSKPGHSTTSECWV 182
           LA KLQEVP  SCF LM+AF++PLS I VK FSFKNS++LSWAF DSSKPGH  TSE WV
Sbjct: 200 LAAKLQEVPVCSCFVLMLAFTKPLSSISVKGFSFKNSEILSWAFCDSSKPGHPATSERWV 259

Query: 183 LHSTTEYAKRVINQTGPQMLASSAFSNIAEELLQEFQ-SKFTIPRPFFMRAHRWDTAFPA 359
           LHST EYA+ V+ Q G Q  +SS  + +AEEL +EFQ +  TI +PFF +AHRW +AFPA
Sbjct: 260 LHSTMEYARGVVAQIGLQKPSSSTLAKVAEELFEEFQRTGLTISQPFFKKAHRWGSAFPA 319

Query: 360 IAVARDEKCLYDDSKRFAMCGDFCVSPNVEGAVLSGIGAAAKILDVL 500
            ++AR+EKCL+D  KR A+CGDFCVSP VEGA+LSG+ A++K+ + L
Sbjct: 320 ASIAREEKCLWDKKKRVAICGDFCVSPTVEGAILSGMAASSKLTEFL 366


>ref|XP_002270560.1| PREDICTED: uncharacterized protein LOC100264528 [Vitis vinifera]
           gi|296082792|emb|CBI21797.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  218 bits (556), Expect = 7e-55
 Identities = 105/167 (62%), Positives = 131/167 (78%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3   LAVKLQEVPALSCFTLMMAFSEPLSLIPVKAFSFKNSDVLSWAFHDSSKPGHSTTSECWV 182
           LA KLQEVP  SCF LM+AF++PLS I VK FSFKNS++LSWAF DSSKPGH  TSE WV
Sbjct: 200 LAAKLQEVPVCSCFVLMLAFTKPLSSISVKGFSFKNSEILSWAFCDSSKPGHPATSERWV 259

Query: 183 LHSTTEYAKRVINQTGPQMLASSAFSNIAEELLQEFQ-SKFTIPRPFFMRAHRWDTAFPA 359
           LHST EYA+ V+ Q G Q  +SS  + +AEEL +EFQ +  TI +PFF +AHRW +AFPA
Sbjct: 260 LHSTMEYARGVVAQIGLQKPSSSTLAKVAEELFEEFQRTGLTISQPFFKKAHRWGSAFPA 319

Query: 360 IAVARDEKCLYDDSKRFAMCGDFCVSPNVEGAVLSGIGAAAKILDVL 500
            ++AR+EKCL+D  KR A+CGDFCVSP VEGA+LSG+ A++K+ + L
Sbjct: 320 ASIAREEKCLWDRKKRVAICGDFCVSPTVEGAILSGMAASSKLTEFL 366


>ref|XP_004147754.1| PREDICTED: uncharacterized protein LOC101216187 [Cucumis sativus]
          Length = 369

 Score =  214 bits (546), Expect = 9e-54
 Identities = 101/167 (60%), Positives = 128/167 (76%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3   LAVKLQEVPALSCFTLMMAFSEPLSLIPVKAFSFKNSDVLSWAFHDSSKPGHSTTSECWV 182
           LA+KLQ +P + CF LM+AF +PLS+IPVK F  KNS+VLSWA+ DSSKPG ST  E WV
Sbjct: 200 LAIKLQNIPVIPCFALMLAFEQPLSMIPVKGFFIKNSEVLSWAYCDSSKPGRSTACERWV 259

Query: 183 LHSTTEYAKRVINQTGPQMLASSAFSNIAEELLQEFQS-KFTIPRPFFMRAHRWDTAFPA 359
           LHST EYA+RVI + G Q  + +    +AEEL QE QS     PRPFFM+AHRW +AFPA
Sbjct: 260 LHSTKEYAERVIAEYGLQKPSDAMLKKVAEELYQELQSVGLCTPRPFFMKAHRWGSAFPA 319

Query: 360 IAVARDEKCLYDDSKRFAMCGDFCVSPNVEGAVLSGIGAAAKILDVL 500
            ++A +EKCL+D+SKR A+CGDFCVSPN+EGA+LSG+ AA+K   ++
Sbjct: 320 ASIAGEEKCLWDESKRVAICGDFCVSPNIEGAILSGLAAASKFQKIV 366


>ref|XP_002332207.1| predicted protein [Populus trichocarpa] gi|222875314|gb|EEF12445.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  214 bits (545), Expect = 1e-53
 Identities = 104/171 (60%), Positives = 131/171 (76%), Gaps = 5/171 (2%)
 Frame = +3

Query: 3   LAVKLQEVPALSCFTLMMAFSEPLSLIPVKAFSFKNSDVLSWAFHDSSKPGHSTTS---- 170
           LA+KLQ++P   CF LM+AFSEPLS I VK FSFKNS++LSW+  DSSKPG ST      
Sbjct: 199 LALKLQDIPVSPCFALMLAFSEPLSSISVKGFSFKNSEILSWSHCDSSKPGRSTARHASV 258

Query: 171 ECWVLHSTTEYAKRVINQTGPQMLASSAFSNIAEELLQEFQS-KFTIPRPFFMRAHRWDT 347
           E WVLHST  YA+ +I QTG Q  +S+  + +AEEL QEFQS    IPRPFFM+AHRW +
Sbjct: 259 ERWVLHSTANYARGIIAQTGLQKPSSATLTKVAEELFQEFQSIGLNIPRPFFMKAHRWGS 318

Query: 348 AFPAIAVARDEKCLYDDSKRFAMCGDFCVSPNVEGAVLSGIGAAAKILDVL 500
           AFP  ++AR++KCL+D  KR A+CGDFCVSPNVEGA+LSG+ AA+K+ ++L
Sbjct: 319 AFPTASIAREQKCLWDRKKRLAICGDFCVSPNVEGAILSGLAAASKLTEML 369


>ref|XP_004161558.1| PREDICTED: uncharacterized protein LOC101224633 [Cucumis sativus]
          Length = 369

 Score =  213 bits (541), Expect = 4e-53
 Identities = 100/167 (59%), Positives = 127/167 (76%), Gaps = 1/167 (0%)
 Frame = +3

Query: 3   LAVKLQEVPALSCFTLMMAFSEPLSLIPVKAFSFKNSDVLSWAFHDSSKPGHSTTSECWV 182
           LA+KLQ +P + CF LM+AF +PLS+IPVK F  KNS+VLSWA+ DSSKPG ST  E WV
Sbjct: 200 LAIKLQNIPVIPCFALMLAFEQPLSMIPVKGFFIKNSEVLSWAYCDSSKPGRSTACERWV 259

Query: 183 LHSTTEYAKRVINQTGPQMLASSAFSNIAEELLQEFQS-KFTIPRPFFMRAHRWDTAFPA 359
           LHST EYA+RVI + G Q  + +    +AEEL QE QS     PRPFFM+AHRW +AFPA
Sbjct: 260 LHSTKEYAERVIAEYGLQKPSDAMLKKVAEELYQELQSVGLCTPRPFFMKAHRWGSAFPA 319

Query: 360 IAVARDEKCLYDDSKRFAMCGDFCVSPNVEGAVLSGIGAAAKILDVL 500
            ++  +EKCL+D+SKR A+CGDFCVSPN+EGA+LSG+ AA+K   ++
Sbjct: 320 ASIPGEEKCLWDESKRVAICGDFCVSPNIEGAILSGLAAASKFQKIV 366


Top