BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017386
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20795.3| unnamed protein product [Vitis vinifera]              130   1e-28
ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-li...   130   1e-28
gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Popul...   128   5e-28
ref|XP_002297730.1| hypothetical protein POPTRDRAFT_547794 [Popu...   127   9e-28
sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related prote...   127   1e-27

>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score =  130 bits (326), Expect = 1e-28
 Identities = 67/84 (79%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   RELRRHLNSLEERLLESMVWEKGSSMYNPFIVARSALFAEINHLGLLAEPMPSLDAIAMH 181
           RELRRHLNSLEERLLESMVWEKGSSMYN  IVAR+AL AE+N LGLLAEPMPSLDAI+MH
Sbjct: 574 RELRRHLNSLEERLLESMVWEKGSSMYNSLIVARAALSAEVNRLGLLAEPMPSLDAISMH 633

Query: 182 YNISFGSLLPLPSLHKHE-TPGQN 250
            N S G L P+PSL K E +PGQN
Sbjct: 634 INASCGGLPPVPSLQKRESSPGQN 657


>ref|XP_002280874.2| PREDICTED: retinoblastoma-related protein-like [Vitis vinifera]
           gi|254789791|sp|A7P514.1|RBR_VITVI RecName:
           Full=Retinoblastoma-related protein
           gi|359392418|gb|AEV45768.1| RBR protein [Vitis
           pseudoreticulata]
          Length = 1007

 Score =  130 bits (326), Expect = 1e-28
 Identities = 67/84 (79%), Positives = 72/84 (85%), Gaps = 1/84 (1%)
 Frame = +2

Query: 2   RELRRHLNSLEERLLESMVWEKGSSMYNPFIVARSALFAEINHLGLLAEPMPSLDAIAMH 181
           RELRRHLNSLEERLLESMVWEKGSSMYN  IVAR+AL AE+N LGLLAEPMPSLDAI+MH
Sbjct: 575 RELRRHLNSLEERLLESMVWEKGSSMYNSLIVARAALSAEVNRLGLLAEPMPSLDAISMH 634

Query: 182 YNISFGSLLPLPSLHKHE-TPGQN 250
            N S G L P+PSL K E +PGQN
Sbjct: 635 INASCGGLPPVPSLQKRESSPGQN 658


>gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Populus tremula x Populus
           tremuloides]
          Length = 1035

 Score =  128 bits (321), Expect = 5e-28
 Identities = 67/86 (77%), Positives = 71/86 (82%), Gaps = 3/86 (3%)
 Frame = +2

Query: 2   RELRRHLNSLEERLLESMVWEKGSSMYNPFIVARSALFAEINHLGLLAEPMPSLDAIAMH 181
           RELRRHLNSLEERLL+SMVWEKGSS+YN   VAR+AL AEIN LGLLAEPMPSLDAIAMH
Sbjct: 603 RELRRHLNSLEERLLDSMVWEKGSSLYNSLTVARTALSAEINRLGLLAEPMPSLDAIAMH 662

Query: 182 YNISFGSLLPLPSLHKHET---PGQN 250
            N S G L P+PSL KHET    GQN
Sbjct: 663 INFSSGCLPPVPSLQKHETSPGSGQN 688


>ref|XP_002297730.1| hypothetical protein POPTRDRAFT_547794 [Populus trichocarpa]
           gi|254789789|sp|B9GLX8.1|RBR_POPTR RecName:
           Full=Retinoblastoma-related protein
           gi|222844988|gb|EEE82535.1| hypothetical protein
           POPTRDRAFT_547794 [Populus trichocarpa]
          Length = 1035

 Score =  127 bits (319), Expect = 9e-28
 Identities = 67/86 (77%), Positives = 70/86 (81%), Gaps = 3/86 (3%)
 Frame = +2

Query: 2   RELRRHLNSLEERLLESMVWEKGSSMYNPFIVARSALFAEINHLGLLAEPMPSLDAIAMH 181
           RELRRHLNSLEERLL+SMVWEKGSS+YN   VAR AL AEIN LGLLAEPMPSLDAIAMH
Sbjct: 603 RELRRHLNSLEERLLDSMVWEKGSSLYNSLTVARPALSAEINRLGLLAEPMPSLDAIAMH 662

Query: 182 YNISFGSLLPLPSLHKHET---PGQN 250
            N S G L P+PSL KHET    GQN
Sbjct: 663 INFSSGCLPPVPSLQKHETSPGSGQN 688


>sp|Q4JF75.1|RBR_SCUBA RecName: Full=Retinoblastoma-related protein
           gi|70568829|dbj|BAE06273.1| retinoblastoma [Scutellaria
           baicalensis]
          Length = 1006

 Score =  127 bits (318), Expect = 1e-27
 Identities = 66/83 (79%), Positives = 70/83 (84%)
 Frame = +2

Query: 2   RELRRHLNSLEERLLESMVWEKGSSMYNPFIVARSALFAEINHLGLLAEPMPSLDAIAMH 181
           RELRRHLNSLEERLLESMVWEKGSSMYN  IVAR AL AEI+ LGLLAEPMPSLDAIAMH
Sbjct: 575 RELRRHLNSLEERLLESMVWEKGSSMYNSLIVARPALSAEISRLGLLAEPMPSLDAIAMH 634

Query: 182 YNISFGSLLPLPSLHKHETPGQN 250
            N+S G L P+ +L KHE  GQN
Sbjct: 635 NNMSCGVLPPMQALLKHEKHGQN 657