BLASTX nr result
ID: Coptis24_contig00017380
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00017380
(963 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002516221.1| adrenodoxin, putative [Ricinus communis] gi|... 221 2e-62
ref|XP_002275665.1| PREDICTED: 2Fe-2S ferredoxin [Vitis vinifera... 220 7e-62
ref|XP_002303851.1| predicted protein [Populus trichocarpa] gi|2... 216 3e-61
ref|XP_002332077.1| predicted protein [Populus trichocarpa] gi|2... 213 8e-60
dbj|BAK06414.1| predicted protein [Hordeum vulgare subsp. vulgare] 209 9e-59
>ref|XP_002516221.1| adrenodoxin, putative [Ricinus communis]
gi|223544707|gb|EEF46223.1| adrenodoxin, putative
[Ricinus communis]
Length = 199
Score = 221 bits (564), Expect(2) = 2e-62
Identities = 112/182 (61%), Positives = 142/182 (78%), Gaps = 16/182 (8%)
Frame = +3
Query: 60 MAKSKLAQVGSSIVKELTRGQYTTIRRRGYMQGPYTQHLQ----------------SLKS 191
+ S+L+++GS IVK+L+RG T++ R +++ PY+Q+ + S +
Sbjct: 2 LVSSRLSRIGSGIVKQLSRGICTSLSRTEFVRTPYSQYWRPQGELHPETKGFRGTLSPRY 61
Query: 192 HAFSTSACDIAHGEGNQQKVMISVTFMDKDGEEKNIEVPVGMSMLEAAHENEIELEGACE 371
H FST+A +G++QK ISVTF+DKDGEEK+I+VP+GMSMLEAAHEN+IELEGACE
Sbjct: 62 HLFSTTASGNDIADGDEQKHKISVTFVDKDGEEKHIKVPLGMSMLEAAHENDIELEGACE 121
Query: 372 GSLACSTCHVIVRDGDYYNRLEEPNDEENDMLDLAFGLTETSRLGCQVIAKPELDGIRLA 551
GSLACSTCHVIV D ++YN+LE+P DEENDMLDLAFGLTETSRLGCQVIAKPELDGIRLA
Sbjct: 122 GSLACSTCHVIVMDMEHYNKLEDPTDEENDMLDLAFGLTETSRLGCQVIAKPELDGIRLA 181
Query: 552 LP 557
+P
Sbjct: 182 IP 183
Score = 45.1 bits (105), Expect(2) = 2e-62
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 659 RLALPAATRNFAVDGHVPKPH 721
RLA+PAATRNFAVDG+VPKPH
Sbjct: 179 RLAIPAATRNFAVDGYVPKPH 199
>ref|XP_002275665.1| PREDICTED: 2Fe-2S ferredoxin [Vitis vinifera]
gi|297738516|emb|CBI27761.3| unnamed protein product
[Vitis vinifera]
Length = 198
Score = 220 bits (561), Expect(2) = 7e-62
Identities = 112/182 (61%), Positives = 137/182 (75%), Gaps = 16/182 (8%)
Frame = +3
Query: 60 MAKSKLAQVGSSIVKELTRGQYTTIRRRGYMQGPYTQHLQSL----------------KS 191
M S+L++VG+ VKEL +G+Y + R G++ PY +LQ L +
Sbjct: 1 MFASRLSRVGAWTVKELCKGKYKSAARMGHLYRPYGHYLQPLFKPQSGTKIFQDTIFQRH 60
Query: 192 HAFSTSACDIAHGEGNQQKVMISVTFMDKDGEEKNIEVPVGMSMLEAAHENEIELEGACE 371
+ FST+A D GE N+++ ISV+F+DKDGEE +I VP+GMSMLEAAHEN+IELEGACE
Sbjct: 61 NTFSTTAADNHSGEENEEEETISVSFVDKDGEEHHIRVPIGMSMLEAAHENDIELEGACE 120
Query: 372 GSLACSTCHVIVRDGDYYNRLEEPNDEENDMLDLAFGLTETSRLGCQVIAKPELDGIRLA 551
GSLACSTCHVIV D +YYN+LE+P DEENDMLDLAFGLTETSRLGCQVIA PELDG+RLA
Sbjct: 121 GSLACSTCHVIVMDMEYYNKLEDPTDEENDMLDLAFGLTETSRLGCQVIASPELDGMRLA 180
Query: 552 LP 557
LP
Sbjct: 181 LP 182
Score = 44.3 bits (103), Expect(2) = 7e-62
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +2
Query: 659 RLALPAATRNFAVDGHVPKPH 721
RLALPAATRNFAVDG +PKPH
Sbjct: 178 RLALPAATRNFAVDGFIPKPH 198
>ref|XP_002303851.1| predicted protein [Populus trichocarpa] gi|222841283|gb|EEE78830.1|
predicted protein [Populus trichocarpa]
Length = 198
Score = 216 bits (551), Expect(2) = 3e-61
Identities = 112/182 (61%), Positives = 139/182 (76%), Gaps = 16/182 (8%)
Frame = +3
Query: 60 MAKSKLAQVGSSIVKELTRGQYTTIRRRGYMQGPYTQ--------------HLQSL--KS 191
M++S+L+++G IVKEL+R Q T + R+ +++ PY+ H S+ K
Sbjct: 1 MSRSRLSRIGVGIVKELSREQCTALCRKSFIRRPYSACWRSQVELHPESKGHQGSIFQKH 60
Query: 192 HAFSTSACDIAHGEGNQQKVMISVTFMDKDGEEKNIEVPVGMSMLEAAHENEIELEGACE 371
H FS++A +G+ MISVTF+DKDGEEK+I+VPVGMSMLEAA EN+IELEGACE
Sbjct: 61 HQFSSTATSRDSADGSDPNEMISVTFVDKDGEEKDIKVPVGMSMLEAAQENDIELEGACE 120
Query: 372 GSLACSTCHVIVRDGDYYNRLEEPNDEENDMLDLAFGLTETSRLGCQVIAKPELDGIRLA 551
GSLACSTCHVIV D +YYN+LE+P DEENDMLDLAFGLTETSRLGCQVIAKPEL+G+RLA
Sbjct: 121 GSLACSTCHVIVTDMEYYNKLEDPTDEENDMLDLAFGLTETSRLGCQVIAKPELNGMRLA 180
Query: 552 LP 557
LP
Sbjct: 181 LP 182
Score = 45.8 bits (107), Expect(2) = 3e-61
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +2
Query: 659 RLALPAATRNFAVDGHVPKPH 721
RLALPAATRNFAVDG+VPKPH
Sbjct: 178 RLALPAATRNFAVDGYVPKPH 198
>ref|XP_002332077.1| predicted protein [Populus trichocarpa] gi|222831963|gb|EEE70440.1|
predicted protein [Populus trichocarpa]
Length = 198
Score = 213 bits (541), Expect(2) = 8e-60
Identities = 110/182 (60%), Positives = 137/182 (75%), Gaps = 16/182 (8%)
Frame = +3
Query: 60 MAKSKLAQVGSSIVKELTRGQYTTIRRRGYMQGPY-------------TQHLQSL---KS 191
M +S+L+++G+ IVKEL+RGQ T + R ++ PY T+ Q K
Sbjct: 1 MLRSRLSRIGAGIVKELSRGQCTAMCRSSFILRPYSACWRPQVELHPETKGFQGTIFRKH 60
Query: 192 HAFSTSACDIAHGEGNQQKVMISVTFMDKDGEEKNIEVPVGMSMLEAAHENEIELEGACE 371
+ FS++A G+ + MIS+TF+ KDGEEK+I+VPVGMSMLEAAHEN+IELEGACE
Sbjct: 61 YQFSSTATSSDSANGSDPEEMISITFVGKDGEEKDIKVPVGMSMLEAAHENDIELEGACE 120
Query: 372 GSLACSTCHVIVRDGDYYNRLEEPNDEENDMLDLAFGLTETSRLGCQVIAKPELDGIRLA 551
GSLACSTCHVIV D +YYN+LE+P DEENDMLDLAFGLTETSRLGCQVIAKPEL+G+RLA
Sbjct: 121 GSLACSTCHVIVMDMEYYNKLEDPADEENDMLDLAFGLTETSRLGCQVIAKPELNGMRLA 180
Query: 552 LP 557
+P
Sbjct: 181 IP 182
Score = 45.1 bits (105), Expect(2) = 8e-60
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 659 RLALPAATRNFAVDGHVPKPH 721
RLA+PAATRNFAVDG+VPKPH
Sbjct: 178 RLAIPAATRNFAVDGYVPKPH 198
>dbj|BAK06414.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 181
Score = 209 bits (533), Expect(2) = 9e-59
Identities = 103/163 (63%), Positives = 125/163 (76%)
Frame = +3
Query: 69 SKLAQVGSSIVKELTRGQYTTIRRRGYMQGPYTQHLQSLKSHAFSTSACDIAHGEGNQQK 248
S+++Q+G+ +++E + Y +G ++HL KS FST+ H EG++ K
Sbjct: 3 SRISQLGARLLRETRAAGTLSTNSNNYYRGQVSRHLTPAKSILFSTATTSSHHDEGSEDK 62
Query: 249 VMISVTFMDKDGEEKNIEVPVGMSMLEAAHENEIELEGACEGSLACSTCHVIVRDGDYYN 428
ISVTF++KDG EK I VPVGMSMLEAAHEN+IELEGACEGSLACSTCHVIV D YN
Sbjct: 63 EKISVTFVNKDGTEKTISVPVGMSMLEAAHENDIELEGACEGSLACSTCHVIVMDVKDYN 122
Query: 429 RLEEPNDEENDMLDLAFGLTETSRLGCQVIAKPELDGIRLALP 557
+LE+P DEENDMLDLAFGLTETSRLGCQVIAKP+LDG+RLALP
Sbjct: 123 KLEDPTDEENDMLDLAFGLTETSRLGCQVIAKPDLDGVRLALP 165
Score = 44.7 bits (104), Expect(2) = 9e-59
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +2
Query: 659 RLALPAATRNFAVDGHVPKPH 721
RLALPAATRNFAVDG VPKPH
Sbjct: 161 RLALPAATRNFAVDGFVPKPH 181