BLASTX nr result

ID: Coptis24_contig00017378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017378
         (1150 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB07954.1| NAM-like protein -like [Oryza sativa Japonica Gr...   132   2e-28
gb|EEC75988.1| hypothetical protein OsI_13110 [Oryza sativa Indi...   129   1e-27
ref|XP_002337109.1| predicted protein [Populus trichocarpa] gi|2...   127   5e-27
gb|EEC75881.1| hypothetical protein OsI_12916 [Oryza sativa Indi...   125   3e-26
tpg|DAA55391.1| TPA: hypothetical protein ZEAMMB73_386438 [Zea m...   124   4e-26

>dbj|BAB07954.1| NAM-like protein -like [Oryza sativa Japonica Group]
           gi|13161445|dbj|BAB33015.1| NAM-like protein -like
           [Oryza sativa Japonica Group]
          Length = 351

 Score =  132 bits (331), Expect = 2e-28
 Identities = 92/315 (29%), Positives = 148/315 (46%), Gaps = 17/315 (5%)
 Frame = +3

Query: 51  QVFPVESEVSKQTAMTHRGVSFSVVEDETICKAWLATGKDPVIVSNQVNQTYWERVLEVF 230
           Q FP     +       R  +FS  ED+ +  AWL    DPV+ +NQ    YW R+ E F
Sbjct: 48  QQFPTAERTTVARPNQKRSKNFSEQEDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHF 107

Query: 231 NQLMGGVTKRTSTSVQTRWCRIHQSVSKFCGFLTQLETNDKKGLTELEQINEAKRVYHSV 410
            +       R+  S+  RW  I ++V+KFCG L+Q+E   + G++  ++I +A  V+  +
Sbjct: 108 YKTSKSTPDRSQNSLMHRWKTIQENVNKFCGHLSQIEGRRQSGVSIHDKIAQAIAVFKEL 167

Query: 411 EGQPFKFESCWNILKGTPKW----EELWSTK-LNTKKAKPTLDVDVSATGLVXXXXXXXX 575
           EG+PF+F  CW++L+   KW    +++ S K   T + KP+ D    AT           
Sbjct: 168 EGKPFQFLHCWSLLRSQSKWHDKMKQITSQKPCATNRQKPSTDGSAKAT----------- 216

Query: 576 XXXXXXXXXXXFDSDVDPISLDDPSKERPIRRKVENERRIDEC----GHHMAKVDEANLV 743
                         D +P   ++P +    +R  E  RR + C     H   K  EA+  
Sbjct: 217 --PTNDETTNHVGEDNEPTETEEPKRPMGKKRAKEQLRRGETCTDAFDHLWEKKKEADAE 274

Query: 744 LKDFLTAFDARLKKSEEIALRELHLKEQKM--------LERKIEREQRVMDTDLNGMPPM 899
            K      D R +KS E+  + L L ++K+        L+R +E E+R+M  D++  P  
Sbjct: 275 KK---KERDERHQKSYELDKQRLELDKKKVANETDEIQLKRMLE-EERIMKMDISSKPLS 330

Query: 900 QRDYYIARQREILAR 944
           Q+ +Y + Q EI+AR
Sbjct: 331 QQQFYKSVQDEIIAR 345


>gb|EEC75988.1| hypothetical protein OsI_13110 [Oryza sativa Indica Group]
          Length = 351

 Score =  129 bits (325), Expect = 1e-27
 Identities = 91/315 (28%), Positives = 147/315 (46%), Gaps = 17/315 (5%)
 Frame = +3

Query: 51  QVFPVESEVSKQTAMTHRGVSFSVVEDETICKAWLATGKDPVIVSNQVNQTYWERVLEVF 230
           Q FP     +       R  +FS  ED+ +  AWL    DPV+ +NQ    YW R+ E F
Sbjct: 48  QQFPTAERTTVARPNQKRSKNFSEQEDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHF 107

Query: 231 NQLMGGVTKRTSTSVQTRWCRIHQSVSKFCGFLTQLETNDKKGLTELEQINEAKRVYHSV 410
            +        +  S+  RW  I ++V+KFCG L+Q+E   + G++  ++I +A  V+  +
Sbjct: 108 YKTSKSTPDSSQNSLMHRWKTIQENVNKFCGHLSQIEGRRQSGVSIHDKIAQAIAVFKEL 167

Query: 411 EGQPFKFESCWNILKGTPKW----EELWSTK-LNTKKAKPTLDVDVSATGLVXXXXXXXX 575
           EG+PF+F  CW++L+   KW    +++ S K   T + KP+ D    AT           
Sbjct: 168 EGKPFQFLHCWSLLRSQSKWHDKMKQITSQKPCATNRQKPSTDGSAKAT----------- 216

Query: 576 XXXXXXXXXXXFDSDVDPISLDDPSKERPIRRKVENERRIDEC----GHHMAKVDEANLV 743
                         D +P   ++P +    +R  E  RR + C     H   K  EA+  
Sbjct: 217 --PTNDETTNHVGEDNEPTETEEPKRPMGKKRAKEQLRRGETCTDAFDHLWEKKKEADAE 274

Query: 744 LKDFLTAFDARLKKSEEIALRELHLKEQKM--------LERKIEREQRVMDTDLNGMPPM 899
            K      D R +KS E+  + L L ++K+        L+R +E E+R+M  D++  P  
Sbjct: 275 KK---KERDERHQKSYELDKQRLELDKKKVANETDEIQLKRMLE-EERIMTMDISSKPLS 330

Query: 900 QRDYYIARQREILAR 944
           Q+ +Y + Q EI+AR
Sbjct: 331 QQQFYKSVQDEIIAR 345


>ref|XP_002337109.1| predicted protein [Populus trichocarpa] gi|222838295|gb|EEE76660.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  127 bits (319), Expect = 5e-27
 Identities = 86/300 (28%), Positives = 141/300 (47%), Gaps = 14/300 (4%)
 Frame = +3

Query: 87  TAMTHRGVSFSVVEDETICKAWLATGKDPVIVSNQVNQTYWERVLEVFNQLMGGVTKRTS 266
           T  + R  +FS  ED  +  AWL T KDP+    Q  +  W RV   F +  G +  R+ 
Sbjct: 44  TKKSQRSKNFSPEEDCLLVSAWLNTSKDPITGVEQQTKQLWARVHAYFVENGGNLNNRSQ 103

Query: 267 TSVQTRWCRIHQSVSKFCGFLTQLETNDKKGLTELEQINEAKRVYHSVEGQPFKFESCWN 446
            S+  RW  I++ V KF GF+TQ+E   + G+TE  +IN+A ++Y S  G+ F+ E CW 
Sbjct: 104 ISISNRWQEINREVGKFVGFVTQIENRQQSGMTEESRINDALQMYASCVGKRFQLEHCWV 163

Query: 447 ILKGTPKWEELWSTKLNTKKAKPTLDVDVSATGLVXXXXXXXXXXXXXXXXXXXFDSDVD 626
           IL+  PKW+   +++      K    V+ S                          S  D
Sbjct: 164 ILRKEPKWQFERASQHQRSNKKQKSHVNASPASST--------------------PSTPD 203

Query: 627 PISLDDPS-----KERPIRRKVENERRIDECGHHMAKVDEANLV-----LKDFLTAFDAR 776
            +SL + S     K+RPI +K   ER   + G    KV E  +       +D L   + +
Sbjct: 204 SVSLGEDSEPLIYKDRPIGQKAAKERLKRKQGKD--KVGETTVTNILQQFRDTLVEIEDQ 261

Query: 777 LKKSEEIALRELHLKEQKMLER----KIEREQRVMDTDLNGMPPMQRDYYIARQREILAR 944
            K+  +I L +  +  Q+  E+    +IE+E+++M  D++ + P+   Y+  R+ EI+ +
Sbjct: 262 KKQDRKIMLEQQAMMIQQSQEKQELDRIEKEEQIMKMDISNLDPISAAYFQNRKLEIMQK 321


>gb|EEC75881.1| hypothetical protein OsI_12916 [Oryza sativa Indica Group]
          Length = 363

 Score =  125 bits (313), Expect = 3e-26
 Identities = 90/315 (28%), Positives = 147/315 (46%), Gaps = 17/315 (5%)
 Frame = +3

Query: 51  QVFPVESEVSKQTAMTHRGVSFSVVEDETICKAWLATGKDPVIVSNQVNQTYWERVLEVF 230
           Q FP     +       R  +FS  +D+ +  AWL    DPV+ +NQ    YW R+ E F
Sbjct: 60  QQFPTAERTTVARPNQKRSKNFSEQKDKILVSAWLHVSLDPVLGTNQTRAAYWTRIYEHF 119

Query: 231 NQLMGGVTKRTSTSVQTRWCRIHQSVSKFCGFLTQLETNDKKGLTELEQINEAKRVYHSV 410
            +       R+  S+  RW  I ++V+KFCG L+Q+E   + G++  ++I +A  V+  +
Sbjct: 120 YKTSKSTPDRSQNSLMHRWKTIQENVNKFCGHLSQIEGRRQSGVSIHDKIAQAIAVFKEL 179

Query: 411 EGQPFKFESCWNILKGTPKW----EELWSTK-LNTKKAKPTLDVDVSATGLVXXXXXXXX 575
           EG+PF+F  C ++L+   KW    +++ S K   T + KP+ D    AT           
Sbjct: 180 EGKPFQFLHCRSLLRSQSKWHDKMKQITSQKPCATNRQKPSTDGSAKAT----------- 228

Query: 576 XXXXXXXXXXXFDSDVDPISLDDPSKERPIRRKVENERRIDEC----GHHMAKVDEANLV 743
                         D +P   ++P +    +R  E  RR + C     H   K  EA+  
Sbjct: 229 --PTNDETTNHVGEDNEPTETEEPKRPMGKKRAKEQLRRGETCTDAFDHLWEKKKEADAE 286

Query: 744 LKDFLTAFDARLKKSEEIALRELHLKEQKM--------LERKIEREQRVMDTDLNGMPPM 899
            K      D R +KS E+  + L L ++K+        L+R +E E+R+M  D++  P  
Sbjct: 287 KK---KERDERHQKSYELDKQRLELDKKKVANETDEIQLKRMLE-EERIMTMDISSKPLS 342

Query: 900 QRDYYIARQREILAR 944
           Q+ +Y + Q EI+AR
Sbjct: 343 QQQFYKSVQDEIIAR 357


>tpg|DAA55391.1| TPA: hypothetical protein ZEAMMB73_386438 [Zea mays]
          Length = 333

 Score =  124 bits (311), Expect = 4e-26
 Identities = 82/280 (29%), Positives = 134/280 (47%), Gaps = 3/280 (1%)
 Frame = +3

Query: 111 SFSVVEDETICKAWLATGKDPVIVSNQVNQTYWERVLEVFNQLMGGVTKRTSTSVQTRWC 290
           +F+V EDE +  A+L   KDP+I +NQ  + YW+R+ E F++       R+ +S+Q RW 
Sbjct: 51  NFTVSEDECLVSAYLNISKDPIIGTNQPIKGYWQRITEYFHEHKSTPYDRSQSSLQQRWG 110

Query: 291 RIHQSVSKFCGFLTQLETNDKKGLTELEQINEAKRVYHSVEGQPFKFESCWNILKGTPKW 470
            I +  S+FCGF  ++E   + GL   ++I EA  ++  + G PFKF  CW IL+   KW
Sbjct: 111 DIQKETSRFCGFYVEVERRKQSGLNVDDKIKEAMAMHERIVGTPFKFMHCWLILRHEMKW 170

Query: 471 EELWSTKLNTKKAKPTLDVDVSATGLVXXXXXXXXXXXXXXXXXXXFDSDVDPISLDDPS 650
             L  + +N   AK T   +   T ++                     S++   S     
Sbjct: 171 NALLDS-MNPTDAKET---EQKGTNIMEELLPPKIARPTGRDHDKNMKSNISSSSFTACI 226

Query: 651 KERPIRRKVENERRIDECGHHMAKVDEANLVLKDFLTAFDARLKKSEEIAL---RELHLK 821
               + +K+  E    E        +EA       +   D +L   EE+ +     L ++
Sbjct: 227 N---VLQKLSMEHGAFEERQDATSREEAT----HMVVRSDRKLALQEEVIIIQKASLEIQ 279

Query: 822 EQKMLERKIEREQRVMDTDLNGMPPMQRDYYIARQREILA 941
           +Q +  ++ ERE+RVM  D+N M P  R+YYI +Q++I A
Sbjct: 280 QQMLKLQEEEREERVMTMDVNKMEPWVREYYINKQKKIAA 319


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