BLASTX nr result
ID: Coptis24_contig00017368
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00017368
(1271 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI16638.3| unnamed protein product [Vitis vinifera] 265 8e-92
ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g... 265 8e-92
ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g... 246 4e-84
ref|XP_002511610.1| conserved hypothetical protein [Ricinus comm... 239 2e-83
ref|XP_002327061.1| predicted protein [Populus trichocarpa] gi|2... 218 6e-78
>emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 265 bits (678), Expect(2) = 8e-92
Identities = 148/250 (59%), Positives = 177/250 (70%), Gaps = 1/250 (0%)
Frame = -1
Query: 1193 SEEQQNQNPDSIP-PLQQQGQVTAKRTWSGAFNAEEQTDSQSLKRRTIPHDVLFRLVVPS 1017
SE P S+ P G V A T E D +S KRR DVLFR+VVPS
Sbjct: 15 SEAPAPSEPTSMKRPRDDDGGVIASAT------GEVADDHRSPKRRAKNQDVLFRIVVPS 68
Query: 1016 RHIGRVIGKEGTRIQKIREDTRATIKIADAITREEERVIIINSGGNDCEISDAERALLQI 837
R IG+VIGKEG+RIQKIRE+T+ATIKIADAI R EERVIII+S ++ ISDAE ALLQ+
Sbjct: 69 RQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDSENVISDAENALLQV 128
Query: 836 ASLVLKEEDVGVFISNMGIQHVTTNMVQLLIAGSQAGCLIGKSGQNIEKLRNCSGATISI 657
ASL+LKE+D +G+ HV N ++LLIAGSQAGCLIG SGQNIEKLRN SGATI+I
Sbjct: 129 ASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITI 188
Query: 656 MPKTQLPQCASAHESDRLVQILGGIPQILKALEIISCQIRENSPSKVISIRPTQNLSSNC 477
+P+ QLP CASAH+SDR+VQI G +P +LKALE I CQ+REN P +VISI P N ++N
Sbjct: 189 LPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRENPPRQVISISPIYNPNTNR 248
Query: 476 SSQTLLAQTS 447
+SQ L S
Sbjct: 249 TSQQYLDPAS 258
Score = 99.8 bits (247), Expect(2) = 8e-92
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = -2
Query: 388 ADILTSEMFIPEILVGGLIGKSGSNISRIRTESGATIKVSGSRGEQNLRHIFLGGTSQQV 209
AD +T M IPE LVGGLIG+ GSNISRIR ESGA IKV G +GEQN R I GG++QQV
Sbjct: 259 ADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQNHRQIQFGGSAQQV 318
Query: 208 AVARKLIDDYIYSQTSQ 158
A+A++ +D+YIYSQ Q
Sbjct: 319 ALAKQRVDEYIYSQLMQ 335
>ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 265 bits (678), Expect(2) = 8e-92
Identities = 148/250 (59%), Positives = 177/250 (70%), Gaps = 1/250 (0%)
Frame = -1
Query: 1193 SEEQQNQNPDSIP-PLQQQGQVTAKRTWSGAFNAEEQTDSQSLKRRTIPHDVLFRLVVPS 1017
SE P S+ P G V A T E D +S KRR DVLFR+VVPS
Sbjct: 15 SEAPAPSEPTSMKRPRDDDGGVIASAT------GEVADDHRSPKRRAKNQDVLFRIVVPS 68
Query: 1016 RHIGRVIGKEGTRIQKIREDTRATIKIADAITREEERVIIINSGGNDCEISDAERALLQI 837
R IG+VIGKEG+RIQKIRE+T+ATIKIADAI R EERVIII+S ++ ISDAE ALLQ+
Sbjct: 69 RQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDSENVISDAENALLQV 128
Query: 836 ASLVLKEEDVGVFISNMGIQHVTTNMVQLLIAGSQAGCLIGKSGQNIEKLRNCSGATISI 657
ASL+LKE+D +G+ HV N ++LLIAGSQAGCLIG SGQNIEKLRN SGATI+I
Sbjct: 129 ASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITI 188
Query: 656 MPKTQLPQCASAHESDRLVQILGGIPQILKALEIISCQIRENSPSKVISIRPTQNLSSNC 477
+P+ QLP CASAH+SDR+VQI G +P +LKALE I CQ+REN P +VISI P N ++N
Sbjct: 189 LPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLRENPPRQVISISPIYNPNTNR 248
Query: 476 SSQTLLAQTS 447
+SQ L S
Sbjct: 249 TSQQYLDPAS 258
Score = 99.8 bits (247), Expect(2) = 8e-92
Identities = 50/77 (64%), Positives = 60/77 (77%)
Frame = -2
Query: 388 ADILTSEMFIPEILVGGLIGKSGSNISRIRTESGATIKVSGSRGEQNLRHIFLGGTSQQV 209
AD +T M IPE LVGGLIG+ GSNISRIR ESGA IKV G +GEQN R I GG++QQV
Sbjct: 259 ADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQNHRQIQFGGSAQQV 318
Query: 208 AVARKLIDDYIYSQTSQ 158
A+A++ +D+YIYSQ Q
Sbjct: 319 ALAKQRVDEYIYSQLMQ 335
>ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine max]
Length = 385
Score = 246 bits (627), Expect(2) = 4e-84
Identities = 136/242 (56%), Positives = 169/242 (69%), Gaps = 1/242 (0%)
Frame = -1
Query: 1169 PDSIP-PLQQQGQVTAKRTWSGAFNAEEQTDSQSLKRRTIPHDVLFRLVVPSRHIGRVIG 993
P IP +Q + KR + QS +R DV+FR+VVPSR IG+VIG
Sbjct: 59 PLQIPFSVQDTAPSSGKRRRDDENSGTASAPEQSAAKRAKGQDVIFRIVVPSRQIGKVIG 118
Query: 992 KEGTRIQKIREDTRATIKIADAITREEERVIIINSGGNDCEISDAERALLQIASLVLKEE 813
KEG RIQKIREDT+ATIKIADAI R EERVIII+S ND +++DAE+AL QIA L+LKE+
Sbjct: 119 KEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDNDEKVTDAEKALEQIAHLILKED 178
Query: 812 DVGVFISNMGIQHVTTNMVQLLIAGSQAGCLIGKSGQNIEKLRNCSGATISIMPKTQLPQ 633
D + S + HV N ++LLIAGSQAG LIG SGQNIEKLR+ SGA+I+++ QLP
Sbjct: 179 DSSLDASKVTAGHVAANTIRLLIAGSQAGGLIGMSGQNIEKLRDSSGASITVLAPNQLPL 238
Query: 632 CASAHESDRLVQILGGIPQILKALEIISCQIRENSPSKVISIRPTQNLSSNCSSQTLLAQ 453
CASAHESDR+VQ+ G +P ++KALE I CQ+REN P +VISI PT N ++ SQ L
Sbjct: 239 CASAHESDRVVQLSGDVPAVMKALEEIGCQLRENPPRQVISISPTYNYAAIRPSQPYLDP 298
Query: 452 TS 447
TS
Sbjct: 299 TS 300
Score = 93.6 bits (231), Expect(2) = 4e-84
Identities = 47/76 (61%), Positives = 58/76 (76%)
Frame = -2
Query: 385 DILTSEMFIPEILVGGLIGKSGSNISRIRTESGATIKVSGSRGEQNLRHIFLGGTSQQVA 206
D +T EM I E +VGGLIG+ GSNISRIR ESGA IKV G +GEQ R I GG++QQVA
Sbjct: 302 DYVTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKVYGGKGEQKHRQIQFGGSAQQVA 361
Query: 205 VARKLIDDYIYSQTSQ 158
+A++ +D+YIYSQ Q
Sbjct: 362 LAKQRVDEYIYSQLIQ 377
>ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical
protein [Ricinus communis]
Length = 363
Score = 239 bits (609), Expect(2) = 2e-83
Identities = 136/242 (56%), Positives = 171/242 (70%), Gaps = 1/242 (0%)
Frame = -1
Query: 1169 PDSIPPLQQQGQVTAKRTWSGAFNAEEQTDSQSLKRRTIPHDVLFRLVVPSRHIGRVIGK 990
P S PP TAKR F+ ++ + + KR DV+FR+VVPSR IG+VIGK
Sbjct: 32 PVSFPPPDIYA-ATAKRR-RDEFDVADEPEGSAAKRAKA-QDVIFRIVVPSRQIGKVIGK 88
Query: 989 EGTRIQKIREDTRATIKIADAITREEERVIIINSGGNDCEISDAERALLQIASLVLKEED 810
G RIQKIRE+T+ATIKIADAI R EERVIII+S +DC +SDAE AL +IA+L+LKE++
Sbjct: 89 VGCRIQKIREETKATIKIADAIARHEERVIIISSKESDCVVSDAENALKKIATLILKEDE 148
Query: 809 VGVFISNM-GIQHVTTNMVQLLIAGSQAGCLIGKSGQNIEKLRNCSGATISIMPKTQLPQ 633
S + G H+ N ++LLIAGSQAG LIG SGQNIEKLRN SGATI+++ QLP
Sbjct: 149 SPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGVSGQNIEKLRNSSGATITVLAPNQLPL 208
Query: 632 CASAHESDRLVQILGGIPQILKALEIISCQIRENSPSKVISIRPTQNLSSNCSSQTLLAQ 453
CASAHESDR+VQI G +P +LKA+E I CQ+REN P +VISI PT N ++ +Q +
Sbjct: 209 CASAHESDRVVQISGDVPVVLKAVEEIGCQLRENPPKQVISISPTYNYATVRPTQPYVDP 268
Query: 452 TS 447
TS
Sbjct: 269 TS 270
Score = 98.6 bits (244), Expect(2) = 2e-83
Identities = 49/77 (63%), Positives = 60/77 (77%)
Frame = -2
Query: 388 ADILTSEMFIPEILVGGLIGKSGSNISRIRTESGATIKVSGSRGEQNLRHIFLGGTSQQV 209
AD +T EM + E LVGGLIG+ GSNISRIR ESGA IKV G +GE+ RHI GGT+QQV
Sbjct: 271 ADYVTLEMMVSETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGEKKHRHIQFGGTAQQV 330
Query: 208 AVARKLIDDYIYSQTSQ 158
A+A++ +D+YIYSQ Q
Sbjct: 331 ALAKQRVDEYIYSQLVQ 347
>ref|XP_002327061.1| predicted protein [Populus trichocarpa] gi|222835376|gb|EEE73811.1|
predicted protein [Populus trichocarpa]
Length = 357
Score = 218 bits (555), Expect(2) = 6e-78
Identities = 126/225 (56%), Positives = 154/225 (68%), Gaps = 8/225 (3%)
Frame = -1
Query: 1133 VTAKRTWSGAFNAEEQTDSQSLKRRTIPHDVLFRLVVPSRHIGRVIGKEGTRIQKIREDT 954
VTAKR E S +R DV+FR+VVPS IG+VIGK+G RIQKIREDT
Sbjct: 26 VTAKRRRDDFDGGET-----SAAKRQARADVIFRIVVPSGKIGKVIGKQGHRIQKIREDT 80
Query: 953 RATIKIADAITREEERVIIINSGGNDCEISDAERALLQIASLVLKEEDVGVFISNMGIQ- 777
+ATIKIADA+ R EERVIII+S N+ +DAE AL +IA L+L E+D G G++
Sbjct: 81 KATIKIADAVARHEERVIIISSKENENGATDAENALQRIAELILNEDDGGSSAGG-GVEI 139
Query: 776 -------HVTTNMVQLLIAGSQAGCLIGKSGQNIEKLRNCSGATISIMPKTQLPQCASAH 618
HV N ++LLIAGSQAG LIG SGQNI KLRN SGA I+++ QLP CASA+
Sbjct: 140 GKLVNAGHVAANTIRLLIAGSQAGSLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAY 199
Query: 617 ESDRLVQILGGIPQILKALEIISCQIRENSPSKVISIRPTQNLSS 483
ESDR+VQI G +P +LKALE I CQ+REN P +VISI P+ N S+
Sbjct: 200 ESDRVVQISGDVPVVLKALEEIGCQLRENPPKQVISISPSYNYSA 244
Score = 100 bits (250), Expect(2) = 6e-78
Identities = 49/77 (63%), Positives = 61/77 (79%)
Frame = -2
Query: 388 ADILTSEMFIPEILVGGLIGKSGSNISRIRTESGATIKVSGSRGEQNLRHIFLGGTSQQV 209
AD +T EM +PE ++GGLIG+SGSNISRIR ESGA IKV G +G Q RHI L G+SQQV
Sbjct: 256 ADYVTMEMMVPETMMGGLIGRSGSNISRIRVESGAVIKVHGGKGAQKHRHIQLAGSSQQV 315
Query: 208 AVARKLIDDYIYSQTSQ 158
A+A++ +D+YIYSQ Q
Sbjct: 316 ALAKQRVDEYIYSQLVQ 332