BLASTX nr result
ID: Coptis24_contig00017366
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00017366
(591 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004142332.1| PREDICTED: serine/threonine-protein phosphat... 42 1e-07
ref|XP_004173702.1| PREDICTED: serine/threonine-protein phosphat... 42 1e-07
ref|XP_003550855.1| PREDICTED: uncharacterized protein LOC100809... 39 2e-06
emb|CAN83818.1| hypothetical protein VITISV_002383 [Vitis vinifera] 42 5e-06
ref|XP_002464860.1| hypothetical protein SORBIDRAFT_01g027780 [S... 39 9e-06
>ref|XP_004142332.1| PREDICTED: serine/threonine-protein phosphatase 7 long form homolog
[Cucumis sativus]
Length = 501
Score = 41.6 bits (96), Expect(2) = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = -1
Query: 567 DWVVIV-LVEKWYNTTHIFHFLCAELGFTPLDFTMISRLSIGIGQPISFHTN--YENMDS 397
DW +I LVE+W TH FHF E T D ++ L + G ++ +T+ +E++
Sbjct: 203 DWPLITALVERWRQETHTFHFTVGESTVTLQDVALLLGLPVN-GLVVTGNTDLQWEDLCE 261
Query: 396 MFMSFPRLDADAYDSSGIKLSHIKTAYMEPLLHPD 292
+ R D+ S +K+S ++T + EP D
Sbjct: 262 ELLGL-RPDSSVLHGSALKVSWLRTHFQEPTSDAD 295
Score = 39.7 bits (91), Expect(2) = 1e-07
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -3
Query: 241 QYVRAFLMFFIGHVLFPN-GHSTVRLGYYAYVSDLHTMRDYDLGSSVYATLISALDKASQ 65
+Y RA+++ +G VLF + + V+L + ++ DL + + GS+V A L L +AS+
Sbjct: 301 RYARAYILSLMGSVLFADKSGADVQLMFLPFLRDLECVEQFSWGSAVLAHLYRELCRASK 360
Query: 64 TFGSRSPQIAGFTGLLEIW 8
+ +I+G LL+IW
Sbjct: 361 ---KGANEISGPLVLLQIW 376
>ref|XP_004173702.1| PREDICTED: serine/threonine-protein phosphatase 7 long form
homolog, partial [Cucumis sativus]
Length = 403
Score = 41.6 bits (96), Expect(2) = 1e-07
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Frame = -1
Query: 567 DWVVIV-LVEKWYNTTHIFHFLCAELGFTPLDFTMISRLSIGIGQPISFHTN--YENMDS 397
DW +I LVE+W TH FHF E T D ++ L + G ++ +T+ +E++
Sbjct: 105 DWPLITALVERWRQETHTFHFTVGESTVTLQDVALLLGLPVN-GLVVTGNTDLQWEDLCE 163
Query: 396 MFMSFPRLDADAYDSSGIKLSHIKTAYMEPLLHPD 292
+ R D+ S +K+S ++T + EP D
Sbjct: 164 ELLGL-RPDSSVLHGSALKVSWLRTHFQEPTSDAD 197
Score = 39.7 bits (91), Expect(2) = 1e-07
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = -3
Query: 241 QYVRAFLMFFIGHVLFPN-GHSTVRLGYYAYVSDLHTMRDYDLGSSVYATLISALDKASQ 65
+Y RA+++ +G VLF + + V+L + ++ DL + + GS+V A L L +AS+
Sbjct: 203 RYARAYILSLMGSVLFADKSGADVQLMFLPFLRDLECVEQFSWGSAVLAHLYRELCRASK 262
Query: 64 TFGSRSPQIAGFTGLLEIW 8
+ +I+G LL+IW
Sbjct: 263 ---KGANEISGPLVLLQIW 278
>ref|XP_003550855.1| PREDICTED: uncharacterized protein LOC100809253 [Glycine max]
Length = 1285
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Frame = -1
Query: 561 VVIVLVEKWYNTTHIFHFLCAELGFTPLDFTMISRLSIGIGQPISFHTN---YENMDSMF 391
+V +E+W TH FH C E T D +++ +S+ G+P++ +TN +E +
Sbjct: 908 LVNAFIERWRPETHTFHLKCGEATITLQDVSVLLGISVD-GRPLTGNTNIDWFELCHELL 966
Query: 390 MSFPRLDADAYDSSGIKLSHIKTAY 316
P D DA D + + LS + + +
Sbjct: 967 GVMP--DDDAVDRNSLLLSLLTSQF 989
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = -3
Query: 253 EGADQYVRAFLMFFIGHVLFPNGHS-TVRLGYYAYVSDLHTMRDYDLGSSVYATLISALD 77
+G +++ RA+++ FIG V+F + S V + Y ++ DL Y G+++ L +
Sbjct: 1000 QGLERFARAWILRFIGGVMFVDKSSKRVPMRYLQFLRDLRECSTYAWGAALLGNLYREMC 1059
Query: 76 KASQTFGSRSPQIAGFTGLLEIW 8
A+ + I GFT L+++W
Sbjct: 1060 IATD---YHAKSIGGFTLLIQLW 1079
>emb|CAN83818.1| hypothetical protein VITISV_002383 [Vitis vinifera]
Length = 624
Score = 42.0 bits (97), Expect(2) = 5e-06
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 1/106 (0%)
Frame = -3
Query: 322 CIYGTPLAS*YTSGVSFDCSTGSEGADQYVRAFLMFFIGHVLFPNGHST-VRLGYYAYVS 146
CI+G P+ T + + D+Y RAF++ +G LF + V+L Y +
Sbjct: 292 CIHGPPITG--TCDIDWSLLCSDLLRDRYARAFILALLGGALFABKTGKHVQLCYLPLLR 349
Query: 145 DLHTMRDYDLGSSVYATLISALDKASQTFGSRSPQIAGFTGLLEIW 8
D + Y GS+V A L L +AS + +I G LL +W
Sbjct: 350 DFTEISHYSWGSAVLAYLYRELCRASL---DNATEIYGPITLLHLW 392
Score = 33.5 bits (75), Expect(2) = 5e-06
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 567 DWVVIV-LVEKWYNTTHIFHFLCAELGFTPLDFTMISRLSIGIGQPIS 427
DW +I LVE+W TH FH E+ T D MI L I G PI+
Sbjct: 253 DWXLIXSLVERWRPETHTFHLPIGEMTVTLQDVAMILGLCIH-GPPIT 299
>ref|XP_002464860.1| hypothetical protein SORBIDRAFT_01g027780 [Sorghum bicolor]
gi|241918714|gb|EER91858.1| hypothetical protein
SORBIDRAFT_01g027780 [Sorghum bicolor]
Length = 892
Score = 38.5 bits (88), Expect(2) = 9e-06
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = -3
Query: 238 YVRAFLMFFIGHVLFPNG-HSTVRLGYYAYVSDLHTMRDYDLGSSVYATLISALDKASQT 62
Y RA+++ G VLFP+G T Y + + + GS++ A L L +A Q
Sbjct: 686 YCRAYVLHMFGTVLFPDGTGDTASCMYIPCLQNWDDAGNRSWGSAILAFLYRQLCEACQR 745
Query: 61 FGSRSPQIAGFTGLLEIWFY 2
G ++G LL+IW +
Sbjct: 746 AGGTHSTMSGCMTLLQIWMW 765
Score = 36.2 bits (82), Expect(2) = 9e-06
Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 6/92 (6%)
Frame = -1
Query: 582 DYEKADWVVIVLVEKWYNTTHIFHFLCAELGFTPLDFTMISRLSIGIGQPISFHTNYENM 403
D +K+ +I +++W TH FH C E+ T D MI + I G P++ T E
Sbjct: 578 DTQKSRLALIASIDRWRPETHTFHLPCGEMTVTLEDTAMILGVRIR-GFPVTGDTESEGW 636
Query: 402 DSMFMSF-----PRLD-ADAYDSSGIKLSHIK 325
++ +F P L+ SSG+ L ++
Sbjct: 637 ENRVHNFLGRALPELEVGKKRTSSGVPLRWLR 668