BLASTX nr result
ID: Coptis24_contig00017341
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00017341
(1509 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containi... 257 6e-66
emb|CBI34116.3| unnamed protein product [Vitis vinifera] 231 3e-58
ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containi... 229 1e-57
ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containi... 229 1e-57
ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containi... 226 9e-57
>ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial [Vitis vinifera]
Length = 817
Score = 257 bits (656), Expect = 6e-66
Identities = 137/334 (41%), Positives = 210/334 (62%), Gaps = 9/334 (2%)
Frame = +2
Query: 56 STRVLKVFQHLKKKAELVPSLYRQVKHN---HNGINLSSVCYLSCLGH-NKKLGFLFKDL 223
++RV+++F +LK + L S + Q+K + HN +++ + C +KL L ++
Sbjct: 63 TSRVVEIFYNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEI 122
Query: 224 IETKN----VQVSTLVESLAESNGNKKDGSNVEMPIPLVLGFDVLLKTYIQLGRLDHAVV 391
+ +K ++ L + L E G + E L+L D+L+K Y+++G D A+
Sbjct: 123 VGSKESVLGFDITALFDVLREGGGEVEG----EHSSVLILVLDMLVKAYVRVGMFDEAID 178
Query: 392 ALFEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGL 571
ALF+ TK+ GFVPH+ SCNF++N I++GK D V I+ LK+LGL PN TYGI +K L
Sbjct: 179 ALFQ-TKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKAL 237
Query: 572 CKRGDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQACRGGI-KIDA 748
C++G+ + A VF+EME G+ P+A T I+GL ++ + YE L+A R ID
Sbjct: 238 CRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDT 297
Query: 749 SGYNAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDE 928
Y A+IRG+C EMKL+EA+ V DM G++P+ Y YG+LIH YC +G +L+A+ALH++
Sbjct: 298 FAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHND 357
Query: 929 MLSKGVKSNSVILSYILQCLCKMGMDIEYLEHFK 1030
M+S G+K+N VI+S ILQCLC+MGM E ++ FK
Sbjct: 358 MVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFK 391
Score = 91.7 bits (226), Expect = 5e-16
Identities = 75/322 (23%), Positives = 145/322 (45%), Gaps = 20/322 (6%)
Frame = +2
Query: 95 KAELVPSLYRQVKH---NHN----GINLSSVCYLSCLGHNKKLGFLFKDLIET----KNV 241
K ++ ++YR +K N N GI + ++C G+ ++ +F+++ E V
Sbjct: 207 KIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRK---GNFEEAVDVFREMEEAGVNPNAV 263
Query: 242 QVSTLVESLAESNGNKKDGSNVEMPIPL--------VLGFDVLLKTYIQLGRLDHAVVAL 397
ST +E L +K+ E L + +++ + +L A
Sbjct: 264 TCSTYIEGLCS---HKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVF 320
Query: 398 FEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLCK 577
+M +G P + +++ + G + V + ++ G+K N +++ LC+
Sbjct: 321 IDMVNEG-IAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCE 379
Query: 578 RGDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQACRGG-IKIDASG 754
G FKE GI D ++ ++D L GK A E+L +G + +D
Sbjct: 380 MGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVH 439
Query: 755 YNAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDEML 934
Y +I GYC + KL +A + ++M++ G+ P+ +Y L+ G+ +G +AL L D +
Sbjct: 440 YTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIG 499
Query: 935 SKGVKSNSVILSYILQCLCKMG 1000
++G+K NS + I++ LC G
Sbjct: 500 TQGLKPNSATHNRIIEGLCMAG 521
Score = 89.4 bits (220), Expect = 2e-15
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 19/236 (8%)
Frame = +2
Query: 395 LFEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLC 574
LF K G + SC +L+ G++D+ + + E + L ++PN YG ++ C
Sbjct: 560 LFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFC 619
Query: 575 KRGDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQACR-GGIKIDAS 751
+ GD+ A +VF + GITPD + +I+G A ++ + GIK D
Sbjct: 620 RDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVI 679
Query: 752 GYNAIIRGYCR---------------EMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYC 886
Y ++ G+ + E + +A +M++ G+ P+ Y LI +C
Sbjct: 680 TYTVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHC 739
Query: 887 HSGQVLKALALHDEMLSKGVKSNSVILSYILQCLCKMG-MD--IEYLEHFKFSGQE 1045
+ + A+ L+DEM+++G++ + V + +L C G MD I + F G E
Sbjct: 740 KTNNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIE 795
Score = 84.3 bits (207), Expect = 7e-14
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 16/233 (6%)
Frame = +2
Query: 344 LLKTYIQLGRLDHAVVALFEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKL 523
LL + G D A++ L M P+ ++ F +G R +F+ L +
Sbjct: 579 LLSSLCMEGEYDKALILLERMLALD-VEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVER 637
Query: 524 GLKPNVSTYGIVVKGLCKRGDLDGAFVVFKEMEGLGITPDAFVHMTLIDG---LSLKGKT 694
G+ P+V TY +++ G C+ L A +F +M+ GI PD + ++DG ++LK
Sbjct: 638 GITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMAR 697
Query: 695 SVAY------EMLQAC-------RGGIKIDASGYNAIIRGYCREMKLQEADGVLQDMRKH 835
S+ + E + A GIK D Y +I +C+ LQ+A + +M
Sbjct: 698 SLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIAR 757
Query: 836 GVSPNAYSYGSLIHGYCHSGQVLKALALHDEMLSKGVKSNSVILSYILQCLCK 994
G+ P+ +Y +L+ C G + +A+ L +EM KG++ +S +S + + + K
Sbjct: 758 GLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILK 810
Score = 81.6 bits (200), Expect = 5e-13
Identities = 72/322 (22%), Positives = 136/322 (42%), Gaps = 1/322 (0%)
Frame = +2
Query: 35 IGTQTIMSTRVLKVFQHLKKKAELVPSLYRQVKHNHNGINLSSVCYLSCLGHNKKLGFLF 214
I T ++ + +L+ + +E+V + +GI L V Y + KLG
Sbjct: 363 IKTNCVIVSSILQCLCEMGMASEVVDQFK---EFRDSGIFLDEVLYNIVVDALCKLG--- 416
Query: 215 KDLIETKNVQVSTLVESLAESNGNKKDGSNVEMPIPLVLGFDVLLKTYIQLGRLDHAVVA 394
+V VE L E G + V+ + L+ Y G+L A
Sbjct: 417 ---------KVEEAVELLNEMKGRRMSLD--------VVHYTTLIAGYCLQGKLVDAK-N 458
Query: 395 LFEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLC 574
+FE K+ G P + + N ++ F NG +++ + + GLKPN +T+ +++GLC
Sbjct: 459 MFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLC 518
Query: 575 KRGDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEML-QACRGGIKIDAS 751
G + A +E + + ++DG T AYE+ + + GI +
Sbjct: 519 MAGKVKEAEAFLNTLEDKCLEN----YSAMVDGYCKANFTRKAYELFSRLSKQGILVKKK 574
Query: 752 GYNAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDEM 931
++ C E + +A +L+ M V PN YG LI +C G + +A + D +
Sbjct: 575 SCFKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDML 634
Query: 932 LSKGVKSNSVILSYILQCLCKM 997
+ +G+ + + + ++ C++
Sbjct: 635 VERGITPDVITYTMMINGYCRV 656
Score = 80.1 bits (196), Expect = 1e-12
Identities = 48/191 (25%), Positives = 93/191 (48%), Gaps = 1/191 (0%)
Frame = +2
Query: 452 ILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLCKRGDLDGAFVVFKEMEGLG 631
++ F K D+F ++ G+ P+ YG ++ CK G+L A + +M G
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362
Query: 632 ITPDAFVHMTLIDGLSLKGKTSVAYEMLQACR-GGIKIDASGYNAIIRGYCREMKLQEAD 808
I + + +++ L G S + + R GI +D YN ++ C+ K++EA
Sbjct: 363 IKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAV 422
Query: 809 GVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDEMLSKGVKSNSVILSYILQCL 988
+L +M+ +S + Y +LI GYC G+++ A + +EM +G++ + V + ++
Sbjct: 423 ELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGF 482
Query: 989 CKMGMDIEYLE 1021
+ G+ E LE
Sbjct: 483 SRNGLKKEALE 493
>emb|CBI34116.3| unnamed protein product [Vitis vinifera]
Length = 727
Score = 231 bits (590), Expect = 3e-58
Identities = 129/347 (37%), Positives = 204/347 (58%), Gaps = 25/347 (7%)
Frame = +2
Query: 56 STRVLKVFQHLKKKAELVPSLYRQVKHN---HNGINLSSVCYLSCLGH-NKKLGFLFKDL 223
++RV+++F +LK + L S + Q+K + HN +++ + C +KL L ++
Sbjct: 63 TSRVVEIFYNLKNEPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEI 122
Query: 224 IETKN----VQVSTLVESLAESNGNKKDGSNVEMPIPLVLGFDVLLKTYIQLGRLDHAVV 391
+ +K ++ L + L E G + E L+L D+L+K Y+++G D A+
Sbjct: 123 VGSKESVLGFDITALFDVLREGGGEVEG----EHSSVLILVLDMLVKAYVRVGMFDEAID 178
Query: 392 ALFEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGL 571
ALF+ TK+ GFVPH+ SCNF++N I++GK D V I+ LK+LGL PN TYGI +K L
Sbjct: 179 ALFQ-TKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKAL 237
Query: 572 CKRGDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQACR-GGIKIDA 748
C++G+ + A VF+EME G+ P+A T I+GL ++ + YE L+A R ID
Sbjct: 238 CRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDT 297
Query: 749 SGYNAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDE 928
Y A+IRG+C EMKL+EA+ V DM G++P+ Y YG+LIH YC +G +L+A+ALH++
Sbjct: 298 FAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHND 357
Query: 929 MLSKGVKSN----------------SVILSYILQCLCKMGMDIEYLE 1021
M+S G+K+N V+ + ++ LCK+G E +E
Sbjct: 358 MVSNGIKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVE 404
Score = 91.3 bits (225), Expect = 6e-16
Identities = 55/200 (27%), Positives = 96/200 (48%), Gaps = 17/200 (8%)
Frame = +2
Query: 452 ILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLCKRGDLDGAFVV-------- 607
++ F K D+F ++ G+ P+ YG ++ CK G+L A +
Sbjct: 303 VIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG 362
Query: 608 --------FKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQACRGG-IKIDASGYN 760
FKE GI D ++ ++D L GK A E+L +G + +D Y
Sbjct: 363 IKTNLVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYT 422
Query: 761 AIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDEMLSK 940
+I GYC + KL +A + ++M++ G+ P+ +Y L+ G+ +G +AL L D + ++
Sbjct: 423 TLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQ 482
Query: 941 GVKSNSVILSYILQCLCKMG 1000
G+K NS + I++ LC G
Sbjct: 483 GLKPNSATHNRIIEGLCMAG 502
Score = 87.4 bits (215), Expect = 9e-15
Identities = 69/280 (24%), Positives = 125/280 (44%), Gaps = 45/280 (16%)
Frame = +2
Query: 326 VLGFDVLLKTYIQLGRLDHAVVALFEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIF 505
V+ + L+ Y G+L A +FE K+ G P + + N ++ F NG +++
Sbjct: 418 VVHYTTLIAGYCLQGKLVDAK-NMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEALELL 476
Query: 506 EELKKLGLKPNVSTYGIVVKGLCKRGD----------------------LDG-------- 595
+ + GLKPN +T+ +++GLC G +DG
Sbjct: 477 DCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTR 536
Query: 596 -AFVVFK--------EMEGLGITPDAFVHMTLIDGLSLKG---KTSVAYEMLQACRGGIK 739
A+ +F M L + P+ ++ LI G + + ++ML GI
Sbjct: 537 KAYELFSRLSKQGILRMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDML--VERGIT 594
Query: 740 IDASGYNAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALAL 919
D Y +I GYCR L+EA + DM++ G+ P+ +Y ++ G+ + + A+ L
Sbjct: 595 PDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKTNNLQDAINL 654
Query: 920 HDEMLSKGVKSNSVILSYILQCLCKMG---MDIEYLEHFK 1030
+DEM+++G++ + V + +L C G D ++LE K
Sbjct: 655 YDEMIARGLQPDIVTYTALLPGKCNFGSRHFDNQWLEEPK 694
Score = 80.9 bits (198), Expect = 8e-13
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 10/195 (5%)
Frame = +2
Query: 446 NFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLCKRGDLDGAFVVFKEMEG 625
N +++ GK + V++ E+K + +V Y ++ G C +G L A +F+EM+
Sbjct: 387 NIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKE 446
Query: 626 LGITPDAFVHMTLIDGLSLKGKTSVAYEMLQACRG--GIKIDASGYNAIIRGYCREMKLQ 799
GI PD + L+ G S G A E+L C G G+K +++ +N II G C K++
Sbjct: 447 RGIEPDIVTYNILVGGFSRNGLKKEALELLD-CIGTQGLKPNSATHNRIIEGLCMAGKVK 505
Query: 800 EADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHD--------EMLSKGVKSN 955
EA+ L + + +Y +++ GYC + KA L ML+ V+ N
Sbjct: 506 EAEAFLNTLEDKCLE----NYSAMVDGYCKANFTRKAYELFSRLSKQGILRMLALDVEPN 561
Query: 956 SVILSYILQCLCKMG 1000
++ ++ C+ G
Sbjct: 562 QIMYGKLIGAFCRDG 576
>ref|XP_004162464.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Cucumis sativus]
Length = 795
Score = 229 bits (584), Expect = 1e-57
Identities = 132/359 (36%), Positives = 215/359 (59%), Gaps = 8/359 (2%)
Frame = +2
Query: 59 TRVLKVFQHLKKKAELVPSLYRQVKHN---HNGINLSSVCYLSCL-GHNKKLGFLFKDLI 226
++V++V + L+++ ++ S + +++ HN +++ + C G +KL LF +LI
Sbjct: 60 SKVVQVLESLRREPKIAFSFFCELEERGFQHNISTYAALIRILCSWGLGRKLETLFLNLI 119
Query: 227 ETKNVQ--VSTLVESLAESNGNKKDGSNVEMPIPLVLGFDVLLKTYIQLGRLDHAVVALF 400
+K V+ V L+ESL + G D S + + +D L+K Y+ + D V LF
Sbjct: 120 GSKKVEFDVLDLIESL--NQGCVVDASFIRV-------YDALIKAYVSVNLFDSVVDLLF 170
Query: 401 EMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLCKR 580
+ +KG FVPH+++CN++LN I++GK + + ++E+LK+ G +PN TY V+KGLCK
Sbjct: 171 RLGRKG-FVPHIFTCNYLLNRLIEHGKMNMALVVYEQLKRFGCQPNDYTYATVIKGLCKI 229
Query: 581 GDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQACRGGI-KIDASGY 757
G ++ A +F+EM G G+ P+AF I+ L ++ Y++LQA R + ID Y
Sbjct: 230 GKMEKAIDIFEEMSGYGMVPNAFACAAYIEALCTHDCSTSGYQLLQAWRAELFPIDTYAY 289
Query: 758 NAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDEMLS 937
+IRG+C EMK+ EA+ V DM +GV P+A +YG LI+GYC + KAL+LH MLS
Sbjct: 290 TVVIRGFCDEMKIDEAESVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSLHSLMLS 349
Query: 938 KGVKSNSVILSYILQCLCKMGMDIEYLEHFK-FSGQEDWGLNLVLSLAKYSLLNFQNMD 1111
KG+KSN VI+S+ILQC +M M E + FK F G+ + N+V ++ ++L ++
Sbjct: 350 KGIKSNCVIVSFILQCFLRMQMYSEVVNQFKVFQGKGVFLDNVVYNIVVHALCELGKLE 408
Score = 75.1 bits (183), Expect = 5e-11
Identities = 60/277 (21%), Positives = 120/277 (43%), Gaps = 1/277 (0%)
Frame = +2
Query: 203 GFLFKDLIETKNVQVSTLVESLAESNGNKKDGSNVEMPIPLVLGFDVLLKTYIQLGRLDH 382
G L + N+Q + + SL S G K + +++ F +L+ ++++
Sbjct: 325 GVLINGYCKKLNLQKALSLHSLMLSKGIKSNC--------VIVSF--ILQCFLRMQMYSE 374
Query: 383 AVVALFEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVV 562
V KG F+ +V N +++ + GK + +++ EE+ ++ +V Y ++
Sbjct: 375 VVNQFKVFQGKGVFLDNV-VYNIVVHALCELGKLEEAIELLEEMTSRQIQMDVMHYTTMI 433
Query: 563 KGLCKRGDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQAC-RGGIK 739
KGL +G + A ++F+ ++ G+ PD+ + L G S G S ++L G++
Sbjct: 434 KGLFAQGKIHEAMMMFENLKKNGVEPDSITYSVLAAGFSRNGLVSKVQDLLDYMEEHGLR 493
Query: 740 IDASGYNAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALAL 919
D + II C K++EA + + V +Y ++I+GYC + A L
Sbjct: 494 KDPKMPDLIIENLCIGGKVKEATEIFNSLEVKTVD----NYAAMINGYCAASDTKSAYKL 549
Query: 920 HDEMLSKGVKSNSVILSYILQCLCKMGMDIEYLEHFK 1030
+ +G+ L ++ LC +E K
Sbjct: 550 FVNLSKEGIFIRRSSLVRLVSRLCMENSSFRAIEVMK 586
Score = 75.1 bits (183), Expect = 5e-11
Identities = 60/305 (19%), Positives = 126/305 (41%), Gaps = 19/305 (6%)
Frame = +2
Query: 143 NGINLSSVCYLSCLGHNKKLGFLFK-----DLIETKNVQVSTLVESLAESN----GNKKD 295
NG+ S+ Y + G + K D +E ++ + L N G K+
Sbjct: 455 NGVEPDSITYSVLAAGFSRNGLVSKVQDLLDYMEEHGLRKDPKMPDLIIENLCIGGKVKE 514
Query: 296 GSNV--EMPIPLVLGFDVLLKTYIQLGRLDHAVVALFEMTKKGGFVPHVWSCNFILNCFI 469
+ + + + V + ++ Y A ++K+G F+ + +
Sbjct: 515 ATEIFNSLEVKTVDNYAAMINGYCAASDTKSAYKLFVNLSKEGIFIRRSSLVRLVSRLCM 574
Query: 470 DNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLCKRGDLDGAFVVFKEMEGLGITPDAF 649
+N F R +++ ++L + ++ Y V+ LC+ ++ A +F + G+ PD
Sbjct: 575 ENSSF-RAIEVMKQLPVMNVEAKEIVYNKVIASLCRVKNMKMAQCLFDCLVRAGLIPDLI 633
Query: 650 VHMTLIDGLSLKGKTSVAYEMLQACRG-GIKIDASGYNAIIRG-------YCREMKLQEA 805
+ +I+G AYE+L R G + D Y ++ G C +++
Sbjct: 634 TYTMMINGYCKINYLREAYELLCDMRNRGREPDIFVYTVLLDGGFKTSLQKCSSVEIALT 693
Query: 806 DGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDEMLSKGVKSNSVILSYILQC 985
+ +M+ ++P+ Y LI GYC + A L +EM+ +G+++++V + +L
Sbjct: 694 SSIFNEMKDMKITPDVVYYTVLIDGYCKMNNLNDAFVLFEEMVDQGIEADAVTYTALLSS 753
Query: 986 LCKMG 1000
C+ G
Sbjct: 754 CCRNG 758
>ref|XP_004146736.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Cucumis sativus]
Length = 920
Score = 229 bits (584), Expect = 1e-57
Identities = 132/359 (36%), Positives = 215/359 (59%), Gaps = 8/359 (2%)
Frame = +2
Query: 59 TRVLKVFQHLKKKAELVPSLYRQVKHN---HNGINLSSVCYLSCL-GHNKKLGFLFKDLI 226
++V++V + L+++ ++ S + +++ HN +++ + C G +KL LF +LI
Sbjct: 60 SKVVQVLESLRREPKIAFSFFCELEERGFQHNISTYAALIRILCSWGLGRKLETLFLNLI 119
Query: 227 ETKNVQ--VSTLVESLAESNGNKKDGSNVEMPIPLVLGFDVLLKTYIQLGRLDHAVVALF 400
+K V+ V L+ESL + G D S + + +D L+K Y+ + D V LF
Sbjct: 120 GSKKVEFDVLDLIESL--NQGCVVDASFIRV-------YDALIKAYVSVNLFDSVVDLLF 170
Query: 401 EMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLCKR 580
+ +KG FVPH+++CN++LN I++GK + + ++E+LK+ G +PN TY V+KGLCK
Sbjct: 171 RLGRKG-FVPHIFTCNYLLNRLIEHGKMNMALVVYEQLKRFGCQPNDYTYATVIKGLCKI 229
Query: 581 GDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQACRGGI-KIDASGY 757
G ++ A +F+EM G G+ P+AF I+ L ++ Y++LQA R + ID Y
Sbjct: 230 GKMEKAIDIFEEMSGYGMVPNAFACAAYIEALCTHDCSTSGYQLLQAWRAELFPIDTYAY 289
Query: 758 NAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDEMLS 937
+IRG+C EMK+ EA+ V DM +GV P+A +YG LI+GYC + KAL+LH MLS
Sbjct: 290 TVVIRGFCDEMKIDEAESVFLDMENYGVVPDAQTYGVLINGYCKKLNLQKALSLHSLMLS 349
Query: 938 KGVKSNSVILSYILQCLCKMGMDIEYLEHFK-FSGQEDWGLNLVLSLAKYSLLNFQNMD 1111
KG+KSN VI+S+ILQC +M M E + FK F G+ + N+V ++ ++L ++
Sbjct: 350 KGIKSNCVIVSFILQCFLRMQMYSEVVNQFKVFQGKGVFLDNVVYNIVVHALCELGKLE 408
Score = 75.5 bits (184), Expect = 3e-11
Identities = 62/320 (19%), Positives = 130/320 (40%), Gaps = 19/320 (5%)
Frame = +2
Query: 143 NGINLSSVCYLSCLGHNKKLGFLFK-----DLIETKNVQVSTLVESLAESN----GNKKD 295
NG+ S+ Y + G + K D +E ++ + L N G K+
Sbjct: 455 NGVEPDSITYSVLAAGFSRNGLVSKVQDLLDYMEEHGLRKDPKMPDLIIENLCIGGKVKE 514
Query: 296 GSNV--EMPIPLVLGFDVLLKTYIQLGRLDHAVVALFEMTKKGGFVPHVWSCNFILNCFI 469
+ + + + V + ++ Y A ++K+G F+ + +
Sbjct: 515 ATEIFNSLEVKTVDNYAAMINGYCAASDTKSAYKLFVNLSKEGIFIRRSSLVRLVSRLCM 574
Query: 470 DNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLCKRGDLDGAFVVFKEMEGLGITPDAF 649
+N F R +++ ++L + ++ Y V+ LC+ ++ A +F + G+ PD
Sbjct: 575 ENSSF-RAIEVMKQLPVMNVEAKEIVYNKVIASLCRVKNMKMAQCLFDCLVRAGLIPDLI 633
Query: 650 VHMTLIDGLSLKGKTSVAYEMLQACRG-GIKIDASGYNAIIRG-------YCREMKLQEA 805
+ +I+G AYE+L R G + D Y ++ G C +++
Sbjct: 634 TYTMMINGYCKINYLREAYELLCDMRNRGREPDIFVYTVLLDGGFKTSLQKCSSVEIALT 693
Query: 806 DGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDEMLSKGVKSNSVILSYILQC 985
+ +M+ ++P+ Y LI GYC + A L +EM+ +G+++++V + +L
Sbjct: 694 SSIFNEMKDMKITPDVVYYTVLIDGYCKMNNLNDAFVLFEEMVDQGIEADAVTYTALLSS 753
Query: 986 LCKMGMDIEYLEHFKFSGQE 1045
C+ G + F G +
Sbjct: 754 CCRNGYKEKAQTLFSVKGSQ 773
Score = 75.1 bits (183), Expect = 5e-11
Identities = 60/277 (21%), Positives = 120/277 (43%), Gaps = 1/277 (0%)
Frame = +2
Query: 203 GFLFKDLIETKNVQVSTLVESLAESNGNKKDGSNVEMPIPLVLGFDVLLKTYIQLGRLDH 382
G L + N+Q + + SL S G K + +++ F +L+ ++++
Sbjct: 325 GVLINGYCKKLNLQKALSLHSLMLSKGIKSNC--------VIVSF--ILQCFLRMQMYSE 374
Query: 383 AVVALFEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVV 562
V KG F+ +V N +++ + GK + +++ EE+ ++ +V Y ++
Sbjct: 375 VVNQFKVFQGKGVFLDNV-VYNIVVHALCELGKLEEAIELLEEMTSRQIQMDVMHYTTMI 433
Query: 563 KGLCKRGDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQAC-RGGIK 739
KGL +G + A ++F+ ++ G+ PD+ + L G S G S ++L G++
Sbjct: 434 KGLFAQGKIHEAMMMFENLKKNGVEPDSITYSVLAAGFSRNGLVSKVQDLLDYMEEHGLR 493
Query: 740 IDASGYNAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALAL 919
D + II C K++EA + + V +Y ++I+GYC + A L
Sbjct: 494 KDPKMPDLIIENLCIGGKVKEATEIFNSLEVKTVD----NYAAMINGYCAASDTKSAYKL 549
Query: 920 HDEMLSKGVKSNSVILSYILQCLCKMGMDIEYLEHFK 1030
+ +G+ L ++ LC +E K
Sbjct: 550 FVNLSKEGIFIRRSSLVRLVSRLCMENSSFRAIEVMK 586
>ref|XP_003525573.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
mitochondrial-like [Glycine max]
Length = 819
Score = 226 bits (577), Expect = 9e-57
Identities = 124/327 (37%), Positives = 191/327 (58%), Gaps = 5/327 (1%)
Frame = +2
Query: 65 VLKVFQHLKKKAELVPSLYRQVKHNHNGINLSS----VCYLSCLGHNKKLGFLFKDLIET 232
VL+ HL S + ++H +S+ + LS ++L LF LI
Sbjct: 70 VLQTLHHLHNNPSHALSFFTHLRHTGFSHTISTYAAIIKILSFWNLQRQLDTLFLHLINR 129
Query: 233 KNVQVSTLVESLAESNGNKKDGSNVEMPIPLVLGFDVLLKTYIQLGRLDHAVVALFEMTK 412
+ + + +L E+ + S+ L+ F+ +KT + L D A+ LF+ T+
Sbjct: 130 DHPPLPFPLLNLFETLFQDFNTSHKNNYF-LLRAFNGFVKTCVSLNMFDKAIDFLFQ-TR 187
Query: 413 KGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLCKRGDLD 592
+ G +P V +CNF+ N +++G+ D+ + ++E+LK+ G PN TY IV+K LCK+GDL
Sbjct: 188 RRGILPDVLTCNFLFNRLVEHGEVDKALAVYEQLKRFGFIPNCYTYAIVIKALCKKGDLK 247
Query: 593 GAFVVFKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQACR-GGIKIDASGYNAII 769
VF+EME +G+ P ++ I+GL ++ + YE+LQA R G ++ Y A++
Sbjct: 248 QPLCVFEEMERVGVIPHSYCFAAYIEGLCNNHRSDLGYEVLQAFRKGNAPLEVYAYTAVV 307
Query: 770 RGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDEMLSKGVK 949
RG+C EMKL EA GV DM + GV P+ Y Y SLIHGYC S +L+ALALHDEM+S+GVK
Sbjct: 308 RGFCNEMKLDEAQGVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALHDEMISRGVK 367
Query: 950 SNSVILSYILQCLCKMGMDIEYLEHFK 1030
+N V++S IL CL +MGM +E ++ FK
Sbjct: 368 TNCVVVSCILHCLGEMGMTLEVVDQFK 394
Score = 88.6 bits (218), Expect = 4e-15
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 3/227 (1%)
Frame = +2
Query: 329 LGFDVLLKTYIQLGRLDHAVVALFEMTKK--GGFVPHVWSCNFILNCFIDNGKFDRVVDI 502
+ ++++ LG+++ AV + EM K G V H + ++N + G ++
Sbjct: 406 VAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTT---LINGYCLQGDLVTAFNM 462
Query: 503 FEELKKLGLKPNVSTYGIVVKGLCKRGDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSL 682
F+E+K+ GLKP++ TY ++ GL + G + ME G+ P++ H +I+GL
Sbjct: 463 FKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCS 522
Query: 683 KGKTSVAYEMLQACRG-GIKIDASGYNAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYS 859
GK A + I+I Y+A++ GYC ++++ V + G S
Sbjct: 523 GGKVLEAEVYFNSLEDKNIEI----YSAMVNGYCETDLVKKSYEVFLKLLNQGDMAKKAS 578
Query: 860 YGSLIHGYCHSGQVLKALALHDEMLSKGVKSNSVILSYILQCLCKMG 1000
L+ C +G + KA+ L D ML V+ + ++ S IL LC+ G
Sbjct: 579 CFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAG 625
Score = 86.7 bits (213), Expect = 2e-14
Identities = 60/210 (28%), Positives = 100/210 (47%), Gaps = 1/210 (0%)
Frame = +2
Query: 386 VVALFEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVK 565
VV F+ K+ G + N + + GK + V++ EE+K L +V Y ++
Sbjct: 389 VVDQFKELKESGMFLDGVAYNIVFDALCMLGKVEDAVEMVEEMKSKRLGLDVKHYTTLIN 448
Query: 566 GLCKRGDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQACRG-GIKI 742
G C +GDL AF +FKEM+ G+ PD + L GLS G ++L G+K
Sbjct: 449 GYCLQGDLVTAFNMFKEMKEKGLKPDIVTYNVLAAGLSRNGHARETVKLLDFMESQGMKP 508
Query: 743 DASGYNAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALH 922
+++ + II G C K+ EA+ + N Y ++++GYC + V K+ +
Sbjct: 509 NSTTHKMIIEGLCSGGKVLEAEVYFNSLE----DKNIEIYSAMVNGYCETDLVKKSYEVF 564
Query: 923 DEMLSKGVKSNSVILSYILQCLCKMGMDIE 1012
++L++G + +L LC G DIE
Sbjct: 565 LKLLNQGDMAKKASCFKLLSKLCMTG-DIE 593
Score = 85.9 bits (211), Expect = 3e-14
Identities = 64/279 (22%), Positives = 132/279 (47%), Gaps = 4/279 (1%)
Frame = +2
Query: 326 VLGFDVLLKTYIQLGRLDHAVVALFEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIF 505
V + +++ + +LD A +F+ ++ G VP V+ + +++ + + R + +
Sbjct: 300 VYAYTAVVRGFCNEMKLDEAQ-GVFDDMERQGVVPDVYVYSSLIHGYCKSHNLLRALALH 358
Query: 506 EELKKLGLKPNVSTYGIVVKGLCKRGDLDGAFVVFKEMEGLGITPDAFVHMTLIDGLSLK 685
+E+ G+K N ++ L + G FKE++ G+ D + + D L +
Sbjct: 359 DEMISRGVKTNCVVVSCILHCLGEMGMTLEVVDQFKELKESGMFLDGVAYNIVFDALCML 418
Query: 686 GKTSVAYEMLQACRGG-IKIDASGYNAIIRGYCREMKLQEADGVLQDMRKHGVSPNAYSY 862
GK A EM++ + + +D Y +I GYC + L A + ++M++ G+ P+ +Y
Sbjct: 419 GKVEDAVEMVEEMKSKRLGLDVKHYTTLINGYCLQGDLVTAFNMFKEMKEKGLKPDIVTY 478
Query: 863 GSLIHGYCHSGQVLKALALHDEMLSKGVKSNSVILSYILQCLCKMGMDIEYLEHFKFSGQ 1042
L G +G + + L D M S+G+K NS I++ LC G +E F+
Sbjct: 479 NVLAAGLSRNGHARETVKLLDFMESQGMKPNSTTHKMIIEGLCSGGKVLE--AEVYFNSL 536
Query: 1043 EDWGLNLVLSLAK---YSLLNFQNMDLYLRQLNCSGIAE 1150
ED + + ++ + L ++ +++L+ LN +A+
Sbjct: 537 EDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQGDMAK 575
Score = 77.8 bits (190), Expect = 7e-12
Identities = 75/295 (25%), Positives = 128/295 (43%), Gaps = 23/295 (7%)
Frame = +2
Query: 179 CLGHNKKLGFLFKDLIETKNVQV-STLVESLAESNGNKKDGSNVEMPIPLVLGFDV---- 343
C G ++ + +E KN+++ S +V E++ KK + E+ + L+ D+
Sbjct: 521 CSGGKVLEAEVYFNSLEDKNIEIYSAMVNGYCETDLVKK---SYEVFLKLLNQGDMAKKA 577
Query: 344 ----LLKTYIQLGRLDHAVVALFEMTKKGGFVPHVWSCNFILNCFIDNGKFDRVVDIFEE 511
LL G ++ AV L M P + IL G +F+
Sbjct: 578 SCFKLLSKLCMTGDIEKAVKLLDRMLLSN-VEPSKIMYSKILAALCQAGDMKNARTLFDV 636
Query: 512 LKKLGLKPNVSTYGIVVKGLCKRGDLDGAFVVFKEMEGLGITPDAFVHMTLIDG------ 673
G P+V TY I++ C+ L A +F++M+ GI PD L+DG
Sbjct: 637 FVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYL 696
Query: 674 ---LSLKGK---TSVAYEMLQACRGGIKI--DASGYNAIIRGYCREMKLQEADGVLQDMR 829
S GK TS+ + +KI D Y ++ G+ + Q+A + M
Sbjct: 697 GKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMI 756
Query: 830 KHGVSPNAYSYGSLIHGYCHSGQVLKALALHDEMLSKGVKSNSVILSYILQCLCK 994
+ G+ P+ +Y +L+ G C+ G V KA+ L +EM SKG+ + I+S + + + K
Sbjct: 757 ESGLEPDTITYTALVSGLCNRGHVEKAVTLLNEMSSKGMTPDVHIISALKRGIIK 811
Score = 71.2 bits (173), Expect = 7e-10
Identities = 59/262 (22%), Positives = 118/262 (45%), Gaps = 18/262 (6%)
Frame = +2
Query: 269 AESNGNKKDGSNVEMPIPLVLGF---DVLLKTY-IQLGRLDHAVVALFEMTKKGGFVPHV 436
AE N + N+E+ +V G+ D++ K+Y + L L+ +M KK
Sbjct: 529 AEVYFNSLEDKNIEIYSAMVNGYCETDLVKKSYEVFLKLLNQG-----DMAKKA------ 577
Query: 437 WSCNFILNCFIDNGKFDRVVDIFEELKKLGLKPNVSTYGIVVKGLCKRGDLDGAFVVFKE 616
SC +L+ G ++ V + + + ++P+ Y ++ LC+ GD+ A +F
Sbjct: 578 -SCFKLLSKLCMTGDIEKAVKLLDRMLLSNVEPSKIMYSKILAALCQAGDMKNARTLFDV 636
Query: 617 MEGLGITPDAFVHMTLIDGLSLKGKTSVAYEMLQAC-RGGIKIDASGYNAIIRGYCREM- 790
G TPD + +I+ A+++ Q R GIK D + ++ G +E
Sbjct: 637 FVHRGFTPDVVTYTIMINSYCRMNCLQEAHDLFQDMKRRGIKPDVITFTVLLDGSLKEYL 696
Query: 791 -KLQEADG-----------VLQDMRKHGVSPNAYSYGSLIHGYCHSGQVLKALALHDEML 934
K + G +L+DM + ++P+ Y L+ G+ + +A++L D+M+
Sbjct: 697 GKRFSSHGKRKTTSLYVSTILRDMEQMKINPDVVCYTVLMDGHMKTDNFQQAVSLFDKMI 756
Query: 935 SKGVKSNSVILSYILQCLCKMG 1000
G++ +++ + ++ LC G
Sbjct: 757 ESGLEPDTITYTALVSGLCNRG 778