BLASTX nr result

ID: Coptis24_contig00017340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017340
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40975.3| unnamed protein product [Vitis vinifera]               93   3e-17
emb|CAN72783.1| hypothetical protein VITISV_008016 [Vitis vinifera]    92   3e-17
ref|XP_002269140.2| PREDICTED: B3 domain-containing protein Os11...    92   6e-17
ref|XP_004146931.1| PREDICTED: putative B3 domain-containing pro...    88   8e-16
ref|XP_003530814.1| PREDICTED: B3 domain-containing transcriptio...    87   2e-15

>emb|CBI40975.3| unnamed protein product [Vitis vinifera]
          Length = 399

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 44/79 (55%), Positives = 59/79 (74%), Gaps = 2/79 (2%)
 Frame = -3

Query: 231 QCFK--LPPKFVQKFGNDLSDDVAHLKVPGGKTWQVELRKSDGCEVFLRSGWQEFVEYYS 58
           +CF   +P +FV ++G +LS+ +  LKVP G  WQV L++ DG EV+L  GW+EFVEYYS
Sbjct: 28  RCFSQGIPKRFVSRYGKNLSN-IMFLKVPSGAVWQVGLKRGDG-EVWLDGGWREFVEYYS 85

Query: 57  ISSGHFLLFRYDGNSNFHV 1
           I  GHFL+FRY+GNS FH+
Sbjct: 86  IGYGHFLVFRYEGNSIFHI 104


>emb|CAN72783.1| hypothetical protein VITISV_008016 [Vitis vinifera]
          Length = 749

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 47/89 (52%), Positives = 62/89 (69%)
 Frame = -3

Query: 270 FCKIIHQPSNAPEQCFKLPPKFVQKFGNDLSDDVAHLKVPGGKTWQVELRKSDGCEVFLR 91
           F KIIH  +   +    +P +FV ++G +LS+ +  LKVP G  WQV L++ DG EV+L 
Sbjct: 25  FFKIIHS-TILRDGTLGIPKRFVSRYGKNLSN-IMFLKVPSGAVWQVGLKRGDG-EVWLD 81

Query: 90  SGWQEFVEYYSISSGHFLLFRYDGNSNFH 4
            GW+EFVEYYSI  GHFL+FRY+GNS FH
Sbjct: 82  GGWREFVEYYSIGYGHFLVFRYEGNSIFH 110



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = -3

Query: 126 LRKSDGCEVFLRSGWQEFVEYYSISSGHFLLFRYDGNSNFHV 1
           L KS G  + L+ GWQEF E+YSI  GH LLFRY+G S+FHV
Sbjct: 412 LIKSPG--ILLKGGWQEFCEFYSIGYGHLLLFRYEGXSHFHV 451


>ref|XP_002269140.2| PREDICTED: B3 domain-containing protein Os11g0197600-like [Vitis
           vinifera]
          Length = 598

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 42/73 (57%), Positives = 56/73 (76%)
 Frame = -3

Query: 219 LPPKFVQKFGNDLSDDVAHLKVPGGKTWQVELRKSDGCEVFLRSGWQEFVEYYSISSGHF 40
           +P +FV ++G +LS+ +  LKVP G  WQV L++ DG EV+L  GW+EFVEYYSI  GHF
Sbjct: 206 IPKRFVSRYGKNLSN-IMFLKVPSGAVWQVGLKRGDG-EVWLDGGWREFVEYYSIGYGHF 263

Query: 39  LLFRYDGNSNFHV 1
           L+FRY+GNS FH+
Sbjct: 264 LVFRYEGNSIFHI 276



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/74 (35%), Positives = 47/74 (63%)
 Frame = -3

Query: 222 KLPPKFVQKFGNDLSDDVAHLKVPGGKTWQVELRKSDGCEVFLRSGWQEFVEYYSISSGH 43
           ++PP F++KF   ++ + A LK   G++W V +++ D C  F + GW++FV+   + +G 
Sbjct: 24  RIPPAFMKKFRR-MTFNNAVLKTVTGESWMVSVKQEDSC-YFFKKGWRKFVKDQHLEAGD 81

Query: 42  FLLFRYDGNSNFHV 1
           FL+F + G+S F V
Sbjct: 82  FLVFWFLGDSTFQV 95


>ref|XP_004146931.1| PREDICTED: putative B3 domain-containing protein Os03g0621600-like
           [Cucumis sativus]
          Length = 346

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/112 (41%), Positives = 66/112 (58%)
 Frame = -3

Query: 336 RFGAKAEHCSSLHVTERKKGFEFCKIIHQPSNAPEQCFKLPPKFVQKFGNDLSDDVAHLK 157
           R G K  +   L   E     +F KII  PS+  E+  K+P KF++ FG +LS  V  L 
Sbjct: 10  RTGLKRHNRRFLEPEETNSSLQFFKII-LPSSVREEKLKMPSKFIRMFGKELSSSVV-LI 67

Query: 156 VPGGKTWQVELRKSDGCEVFLRSGWQEFVEYYSISSGHFLLFRYDGNSNFHV 1
           VP G  W+V L K +G +++    W +F++YYSI  G  L+F+Y+GNS+FHV
Sbjct: 68  VPNGGVWEVGLEKFNG-QIWFNHSWNKFIDYYSIDYGFLLIFKYEGNSSFHV 118


>ref|XP_003530814.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 477

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 40/74 (54%), Positives = 55/74 (74%)
 Frame = -3

Query: 222 KLPPKFVQKFGNDLSDDVAHLKVPGGKTWQVELRKSDGCEVFLRSGWQEFVEYYSISSGH 43
           +LP KFV+K+GN LS+ +  LK+P G  W+V L K DG  V+ + GW++F EYYS+++GH
Sbjct: 231 RLPEKFVRKYGNHLSNSML-LKLPNGIEWKVNLEKRDG-SVWFQEGWKDFAEYYSLANGH 288

Query: 42  FLLFRYDGNSNFHV 1
            L FRYDG S+FHV
Sbjct: 289 LLGFRYDGTSHFHV 302



 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/94 (43%), Positives = 62/94 (65%)
 Frame = -3

Query: 282 KGFEFCKIIHQPSNAPEQCFKLPPKFVQKFGNDLSDDVAHLKVPGGKTWQVELRKSDGCE 103
           K   F +I+H P N  +   +LP +FV K+G  LS+ +  LK+P G  W+V L K DG  
Sbjct: 19  KPIHFLRIMH-PDNLLQGKLRLPAEFVNKYGKHLSNTM-FLKLPNGAEWRVNLEKRDG-R 75

Query: 102 VFLRSGWQEFVEYYSISSGHFLLFRYDGNSNFHV 1
           V+ + GW++FVE++S++ GH L+F+YDG  +FHV
Sbjct: 76  VWFQEGWKKFVEHHSLAHGHLLVFKYDGTFHFHV 109


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