BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017339
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation...   355   1e-95
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...   355   1e-95
ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation...   353   6e-95
ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|2...   352   8e-95
ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation...   352   1e-94

>ref|XP_003530952.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 926

 Score =  355 bits (911), Expect = 1e-95
 Identities = 203/408 (49%), Positives = 264/408 (64%), Gaps = 19/408 (4%)
 Frame = +2

Query: 11   RGYFEDPSKIVTFDMINNIF---IATRVRKGIARLEEIEQLTLLAEFAKIPAQKVDILVY 181
            R + ++PS+I T+D +N  F   +A R RKG  R E++EQLT L + AK PAQK++IL  
Sbjct: 238  RQFMKNPSEI-TWDAVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFS 296

Query: 182  IVWTQLKVVP--RGHVPVTVWKKCMQNMLVIVDILEENLKIVLDDSGEFGFEDISKGINC 355
            +V  Q  V P   GH+P+ VWKKC+QNML+I+DIL +   I++DDS E    +  KG   
Sbjct: 297  VVSAQFDVNPGLNGHMPINVWKKCVQNMLIILDILVQYPNIMVDDSVEPDENETQKGAEH 356

Query: 356  DGEVRIWRANLPDLYAWVAFEFCIGLKSARLESWAYKEMLRCEPVLLLLSQKVFKYLQLR 535
            +G +R+W  NL      +  EF   L+     +  Y E LR EP  L+L+Q V +YL+ R
Sbjct: 357  NGTIRVW-GNLVAFLERIDVEFFKSLQCIDPHTRDYVERLRDEPTFLVLAQNVQEYLE-R 414

Query: 536  RKDFVEAAIVARRMMEHLYYKPREAYDAMRKLVEQTEGG--------------AVQVYWW 673
              +F  A+ VA R +E +YYKP+E YDAMRKL E TE G               +   + 
Sbjct: 415  VGNFKAASKVALRRVELIYYKPQEVYDAMRKLTELTEDGDNGGEASEKEFEESRIPTAFV 474

Query: 674  PTPSLISKHAQQRPTFPENDSALMAKLRAFIDKHGNDAAKVDAMLFAIYHHAINDEFSVS 853
             TP ++++    +PTFPEN   LM  L + I K+G++  K  AML  IYHHA+ DEFS++
Sbjct: 475  VTPEVVTR----KPTFPENSRTLMDILVSMIYKYGDERTKARAMLCDIYHHALLDEFSIA 530

Query: 854  RDLLLMSHLQDKVQHLDASTKILFNRTMAQLGLCAFRAGLIAEAHSYLSELYADGSIKKL 1033
            RDLLLMSHLQD VQH+D ST+ILFNR M+QLGLCAFR GLI+EAH  LSELY+ G +K+L
Sbjct: 531  RDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKEL 590

Query: 1034 LCQGVSDCSCHYKTQKQEIMEARNQMPYHTHINLELLEAVHLICAMLL 1177
            L QGVS    H KT +QE +E R QMPYH HINLELLEAVHL+ AMLL
Sbjct: 591  LAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLVSAMLL 638


>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Vitis vinifera]
          Length = 946

 Score =  355 bits (911), Expect = 1e-95
 Identities = 207/408 (50%), Positives = 259/408 (63%), Gaps = 21/408 (5%)
 Frame = +2

Query: 17   YFEDPSKIVTFDMINNIF---IATRVRKGIARLEEIEQLTLLAEFAKIPAQKVDILVYIV 187
            + +DPS+I T+D +N  F   +A R RKG  R+E++EQLT L   AK PAQK++IL  +V
Sbjct: 245  FMKDPSEI-TWDTVNKKFKEIVAVRGRKGTGRIEQVEQLTFLTRVAKTPAQKLEILFSVV 303

Query: 188  WTQLKVVPR--GHVPVTVWKKCMQNMLVIVDILEENLKIVLDDSGEFGFEDISKGINCDG 361
              Q  V P   GH+P+ VWKKC+QNMLVI+DIL ++  I++DD  E    +  KG +  G
Sbjct: 304  SAQFDVNPSLSGHMPINVWKKCVQNMLVILDILVQHSNILVDDVVEPEENETQKGADYKG 363

Query: 362  EVRIWRANLPDLYAWVAFEFCIGLKSARLESWAYKEMLRCEPVLLLLSQKVFKYLQLRRK 541
             +R+W  NL      +  EF   L+     +  Y E LR EP+ L+L+Q V  YL+ R  
Sbjct: 364  TIRVW-GNLVAFLERIDVEFFKSLQCIDPHTREYVERLRDEPLFLVLAQNVQDYLE-RVG 421

Query: 542  DFVEAAIVARRMMEHLYYKPREAYDAMRKLVEQTE---GGAVQVYWWP------------ 676
            DF  A+ VA R +E +YYKP+E YDAM+ L EQTE    G  +    P            
Sbjct: 422  DFKAASKVALRRVELIYYKPQEVYDAMKNLAEQTEDTENGESEAGEEPRVEESRGPPAFV 481

Query: 677  -TPSLISKHAQQRPTFPENDSALMAKLRAFIDKHGNDAAKVDAMLFAIYHHAINDEFSVS 853
             TP ++ +    +PTFPEN   LM  L + I  HG++  K  AML  IYHHAI DEFS +
Sbjct: 482  VTPEVVPR----KPTFPENSRTLMDILVSLIYNHGDERTKARAMLCDIYHHAILDEFSTA 537

Query: 854  RDLLLMSHLQDKVQHLDASTKILFNRTMAQLGLCAFRAGLIAEAHSYLSELYADGSIKKL 1033
            RDLLLMSHLQD VQH+D ST+ILFNR MAQLGLCAFR GLIAE H  LSELY+ G +K+L
Sbjct: 538  RDLLLMSHLQDNVQHMDISTQILFNRAMAQLGLCAFRVGLIAEGHGCLSELYSGGRVKEL 597

Query: 1034 LCQGVSDCSCHYKTQKQEIMEARNQMPYHTHINLELLEAVHLICAMLL 1177
            L QGVS    H KT +QE +E R QMPYH HINLELLE VHLICAMLL
Sbjct: 598  LAQGVSQSRYHEKTPEQERIERRRQMPYHMHINLELLEGVHLICAMLL 645


>ref|XP_003525194.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 925

 Score =  353 bits (905), Expect = 6e-95
 Identities = 204/408 (50%), Positives = 261/408 (63%), Gaps = 19/408 (4%)
 Frame = +2

Query: 11   RGYFEDPSKIVTFDMINNIF---IATRVRKGIARLEEIEQLTLLAEFAKIPAQKVDILVY 181
            R + ++PS+I T+D +N  F   +A R RKG  R E++EQLT L + AK PAQK++IL  
Sbjct: 237  RQFMKNPSEI-TWDAVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFS 295

Query: 182  IVWTQLKVVP--RGHVPVTVWKKCMQNMLVIVDILEENLKIVLDDSGEFGFEDISKGINC 355
            +V  Q  V P   GHVP+ VWKKC+QNML+I+DIL +   IV DD  E    +  KG   
Sbjct: 296  VVSAQFDVNPGLNGHVPINVWKKCVQNMLIILDILVQYPNIVADDLVEPDENETQKGPEH 355

Query: 356  DGEVRIWRANLPDLYAWVAFEFCIGLKSARLESWAYKEMLRCEPVLLLLSQKVFKYLQLR 535
            +G +R+W  NL      +  EF   L+     +  Y E LR EP  L+L+Q V +YL+ R
Sbjct: 356  NGTIRVW-GNLVAFLERIDVEFFKSLQCIDPHTRDYVERLRDEPTFLVLAQNVQEYLE-R 413

Query: 536  RKDFVEAAIVARRMMEHLYYKPREAYDAMRKLVEQTEGG--------------AVQVYWW 673
              +F  A+ VA R +E +YYKP+E YDAMRKL E TE G               +   + 
Sbjct: 414  VGNFKAASKVALRRVELIYYKPQEVYDAMRKLTELTEDGDNGGEASEKEFEESRIPTAFV 473

Query: 674  PTPSLISKHAQQRPTFPENDSALMAKLRAFIDKHGNDAAKVDAMLFAIYHHAINDEFSVS 853
             TP ++++    +PTFPEN   LM  L + I K+G++  K  AML  IYHHA+ DEFS +
Sbjct: 474  VTPEVVAR----KPTFPENSRTLMDVLVSMIYKYGDERTKARAMLCDIYHHALLDEFSTA 529

Query: 854  RDLLLMSHLQDKVQHLDASTKILFNRTMAQLGLCAFRAGLIAEAHSYLSELYADGSIKKL 1033
            RDLLLMSHLQD VQH+D ST+ILFNR M+QLGLCAFR GLI+EAH  LSELY+ G +K+L
Sbjct: 530  RDLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKEL 589

Query: 1034 LCQGVSDCSCHYKTQKQEIMEARNQMPYHTHINLELLEAVHLICAMLL 1177
            L QGVS    H KT +QE +E R QMPYH HINLELLEAVHL+ AMLL
Sbjct: 590  LAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLVSAMLL 637


>ref|XP_002323353.1| predicted protein [Populus trichocarpa] gi|222867983|gb|EEF05114.1|
            predicted protein [Populus trichocarpa]
          Length = 895

 Score =  352 bits (904), Expect = 8e-95
 Identities = 201/399 (50%), Positives = 263/399 (65%), Gaps = 12/399 (3%)
 Frame = +2

Query: 17   YFEDPSKIVTFDMINNIF---IATRVRKGIARLEEIEQLTLLAEFAKIPAQKVDILVYIV 187
            + +DPS+I T+D++N  F   +A R R+G  R E++EQLT L + AK PAQK++IL  +V
Sbjct: 222  FAKDPSEI-TWDIVNKKFKEIVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVV 280

Query: 188  WTQLKVVP--RGHVPVTVWKKCMQNMLVIVDILEENLKIVLDDSGEFGFEDISKGINCDG 361
              Q  V P   GH+P+ VWK C+QNML+I+DILE+   IV+DD+ E    +  KG + +G
Sbjct: 281  SAQFDVSPGLSGHMPINVWKNCVQNMLIILDILEQYPSIVVDDTVEPDENETQKGGDHNG 340

Query: 362  EVRIWRANLPDLYAWVAFEFCIGLKSARLESWAYKEMLRCEPVLLLLSQKVFKYLQLRRK 541
             +RIW  NL      +  EF   L+     +  Y E L+ EP+ L+L+Q   +YL+    
Sbjct: 341  PIRIW-GNLVAFLERIDSEFFKSLQCIDPHTHEYVERLQDEPMFLVLAQNAQEYLE-HVG 398

Query: 542  DFVEAAIVARRMMEHLYYKPREAYDAMRKLVEQTEGGA------VQVYWWPTPSLI-SKH 700
            D   AA VA + +E +YYKP+E YDAMRKLVEQTE G       V+     +  ++ S+ 
Sbjct: 399  DLKAAAKVALKRVELIYYKPQEVYDAMRKLVEQTEDGGNGEEPKVEGSRGSSAFVVTSEL 458

Query: 701  AQQRPTFPENDSALMAKLRAFIDKHGNDAAKVDAMLFAIYHHAINDEFSVSRDLLLMSHL 880
              ++PTFPEN  A+M  L + I K G++  K  AML  IYHHA+ DE S SRDLLLMSHL
Sbjct: 459  VPRKPTFPENSRAMMDALVSLIYKSGDERTKARAMLCDIYHHALLDELSTSRDLLLMSHL 518

Query: 881  QDKVQHLDASTKILFNRTMAQLGLCAFRAGLIAEAHSYLSELYADGSIKKLLCQGVSDCS 1060
            QD +QH+D S++ILFNR MAQLGLCAFR G+I EAH  L ELY+ G +K+LL QGVS   
Sbjct: 519  QDNIQHMDISSQILFNRAMAQLGLCAFRVGMITEAHGCLFELYSGGRVKELLAQGVSQSR 578

Query: 1061 CHYKTQKQEIMEARNQMPYHTHINLELLEAVHLICAMLL 1177
             H KTQ+QE +E R QMPYH HINLELLE+VHLICAMLL
Sbjct: 579  YHEKTQEQERLERRRQMPYHMHINLELLESVHLICAMLL 617


>ref|XP_003521511.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Glycine max]
          Length = 926

 Score =  352 bits (902), Expect = 1e-94
 Identities = 200/407 (49%), Positives = 264/407 (64%), Gaps = 20/407 (4%)
 Frame = +2

Query: 17   YFEDPSKIVTFDMINNIF---IATRVRKGIARLEEIEQLTLLAEFAKIPAQKVDILVYIV 187
            + +DPS+I T+D +N  F   +A R RKG  R E++EQLT L + AK  AQK++IL  +V
Sbjct: 237  FMKDPSEI-TWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTAAQKLEILFSVV 295

Query: 188  WTQLKVVP--RGHVPVTVWKKCMQNMLVIVDILEENLKIVLDDSGEFGFEDISKGINCDG 361
              Q  V P   GH+P+ VWKKC+QNMLVI+DIL ++  IV+DDS E    +  KG++ +G
Sbjct: 296  SAQFDVNPGLNGHMPINVWKKCVQNMLVILDILVQHPNIVVDDSVEPDENETQKGVDYNG 355

Query: 362  EVRIWRANLPDLYAWVAFEFCIGLKSARLESWAYKEMLRCEPVLLLLSQKVFKYLQLRRK 541
             +R+W  NL      +  EF   L+     +  Y E LR EP+ L+L+Q V +YL+ R  
Sbjct: 356  PIRVW-GNLVAFLERIDVEFFKSLQCIDPHTRDYVERLRDEPLFLVLAQNVQEYLE-RVG 413

Query: 542  DFVEAAIVARRMMEHLYYKPREAYDAMRKLVEQTEGG---------------AVQVYWWP 676
            +F  A+ VA R +E +YYKP+E Y AM+KL E TE G                +   +  
Sbjct: 414  NFKAASKVALRRVELIYYKPQEVYVAMKKLTELTEDGDNGVEASEEKGFEESRIPTAFVA 473

Query: 677  TPSLISKHAQQRPTFPENDSALMAKLRAFIDKHGNDAAKVDAMLFAIYHHAINDEFSVSR 856
            TP ++++    +PTFPEN   +M  L + I K+G++  K  AML  IYHHA+ DEFS++R
Sbjct: 474  TPEVVAR----KPTFPENSRTIMDVLVSLIYKYGDERTKARAMLCDIYHHALLDEFSIAR 529

Query: 857  DLLLMSHLQDKVQHLDASTKILFNRTMAQLGLCAFRAGLIAEAHSYLSELYADGSIKKLL 1036
            DLLLMSHLQD VQH+D ST+ILFNR M+QLGLCAFR GLI+EAH  LSELY+ G +K+LL
Sbjct: 530  DLLLMSHLQDSVQHMDISTQILFNRAMSQLGLCAFRVGLISEAHGCLSELYSGGRVKELL 589

Query: 1037 CQGVSDCSCHYKTQKQEIMEARNQMPYHTHINLELLEAVHLICAMLL 1177
             QGVS    H KT +QE +E R QMPYH HINLELLE VHL+ AMLL
Sbjct: 590  AQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLETVHLVSAMLL 636