BLASTX nr result

ID: Coptis24_contig00017325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017325
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]    71   3e-10
gb|ABD32595.1| HAT dimerisation [Medicago truncatula]                  68   3e-09
gb|ADN33674.1| transposase [Cucumis melo subsp. melo]                  65   1e-08
gb|ACX85638.1| putative transposase [Cucumis melo]                     65   1e-08
gb|AAV32822.1| transposase [Zea mays]                                  63   6e-08

>emb|CAN61798.1| hypothetical protein VITISV_044291 [Vitis vinifera]
          Length = 563

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = -2

Query: 472 ASESAFSTGGRIIDPFRSSLRPNTVEALICTQNWLRTSAKPIDLQTVMREIEQYD 308
           A ES FSTGGRI+DPFRSSL P TVE LIC QN LR+S  PI+L+  M EIE  +
Sbjct: 495 AFESKFSTGGRILDPFRSSLSPKTVEMLICGQNRLRSSPIPINLRETMEEIENLE 549


>gb|ABD32595.1| HAT dimerisation [Medicago truncatula]
          Length = 132

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 30/55 (54%), Positives = 43/55 (78%)
 Frame = -2

Query: 472 ASESAFSTGGRIIDPFRSSLRPNTVEALICTQNWLRTSAKPIDLQTVMREIEQYD 308
           ASESAFSTGGR++  +RSSL  +TVEALIC QNWLR+S   +D++  + ++E+ +
Sbjct: 59  ASESAFSTGGRVLSCYRSSLTTHTVEALICAQNWLRSSPLSVDIEEQLEDLEKLE 113


>gb|ADN33674.1| transposase [Cucumis melo subsp. melo]
          Length = 347

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = -2

Query: 469 SESAFSTGGRIIDPFRSSLRPNTVEALICTQNWLRTSAKPIDLQTVMREIEQYDAID 299
           SESAFSTGGR++D FRSSL P T EALIC QNW++  +KP+D  T   EI+  + ID
Sbjct: 285 SESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ--SKPLDDMT--EEIDGAEEID 337


>gb|ACX85638.1| putative transposase [Cucumis melo]
          Length = 680

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 34/57 (59%), Positives = 42/57 (73%)
 Frame = -2

Query: 469 SESAFSTGGRIIDPFRSSLRPNTVEALICTQNWLRTSAKPIDLQTVMREIEQYDAID 299
           SESAFSTGGR++D FRSSL P T EALIC QNW++  +KP+D  T   EI+  + ID
Sbjct: 618 SESAFSTGGRVLDSFRSSLTPQTAEALICAQNWIQ--SKPLDDMT--EEIDGAEEID 670


>gb|AAV32822.1| transposase [Zea mays]
          Length = 674

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = -2

Query: 472 ASESAFSTGGRIIDPFRSSLRPNTVEALICTQNWLRTSAKPIDLQTVMREIEQYD 308
           ASESAFSTGGRI+D FRSSL P  +E+L+CTQ+WLR +  PID+   + E+ + +
Sbjct: 585 ASESAFSTGGRILDDFRSSLTPFMLESLVCTQDWLRWTI-PIDITENIEELTKLE 638


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