BLASTX nr result

ID: Coptis24_contig00017324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017324
         (1926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]   551   e-154
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot...   549   e-154
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot...   548   e-153
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated...   542   e-151
ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated...   542   e-151

>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
          Length = 1187

 Score =  551 bits (1419), Expect = e-154
 Identities = 279/447 (62%), Positives = 343/447 (76%), Gaps = 3/447 (0%)
 Frame = -3

Query: 1924 WVEHKGILFLGYSQFASIVSKSESSRSAVACHDILLQVPSILICDEGHTPRNEETDVLRS 1745
            WV  K ILFLGY QF+SIV    +S++ +AC +ILL+ P ILI DEGHTPRNE TDVL S
Sbjct: 683  WVAEKSILFLGYKQFSSIVCGDGASKATIACQEILLKAPQILILDEGHTPRNENTDVLYS 742

Query: 1744 LAKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDTSQIIKRRVMSRVQISSGRRQ 1565
            LAKVQTPRKVVLSGTL+QNHVKEVFNILNLVRPKFLK ++S+ + +R+MS+V I   R+Q
Sbjct: 743  LAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAVVKRIMSKVDIMGVRKQ 802

Query: 1564 VKAGADALFFDTVEDTLQNDDNLRRKVTVIQDLREMTSNVLHYYKGDFLDELPGMVDFTV 1385
            +K+ A   F+D VE+TLQ DDN RRK+TVIQDLREMTS VLHYYKGDFLDELPG+VDFTV
Sbjct: 803  LKSNAADAFYDLVENTLQKDDNFRRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTV 862

Query: 1384 LLNLSPQQRRIIDSLKKVE-QFKRTAIGSAVSLHPMLKEISEGPAVGDKGC--RVNXXXX 1214
            LLNLS +Q++ + +L K E +FK+ ++GSAV LHP LK  +E  A  +            
Sbjct: 863  LLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEMTCQKKM 922

Query: 1213 XXXXXXXDVRDGVKAKFFVNILGLCESSGEKLLVFCKYLLPMKFLERLVVRTKGWRVGKE 1034
                   DVRDGVKAKFF+N+L LC+SSGEKLLVF +YLLP++FLE+L ++ KGW  GKE
Sbjct: 923  DEILEQLDVRDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKE 982

Query: 1033 IFMISGDXXXXXXXXXXXXXXXXSDARIFFGSIQACGEGISLVGASRILIMDVHLNPSVT 854
            IF ISG+                 DAR+FFGSI+ACGEGISLVGASR+LI+DVHLNPSVT
Sbjct: 983  IFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVT 1042

Query: 853  RQAIGRAFRPGQARKVFIYRLVASDSPEEANHHTSLRKELTSKLWFEWNEFSGNPNFEME 674
            RQAIGRAFRPGQ +KV +Y+LVA+DSPEE +H++  +KEL SK+WFEWNE+ G+  FE E
Sbjct: 1043 RQAIGRAFRPGQKKKVHVYKLVAADSPEEEDHNSCFKKELISKMWFEWNEYCGHHEFEAE 1102

Query: 673  KVNLRNSGDEFWESPPLQEDVKDVYRR 593
             V++ +SGD F ESP L+ED+K +YRR
Sbjct: 1103 TVDVSDSGDIFLESPLLREDIKVLYRR 1129


>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 944

 Score =  549 bits (1415), Expect = e-154
 Identities = 279/447 (62%), Positives = 342/447 (76%), Gaps = 3/447 (0%)
 Frame = -3

Query: 1924 WVEHKGILFLGYSQFASIVSKSESSRSAVACHDILLQVPSILICDEGHTPRNEETDVLRS 1745
            WV  K ILFLGY QF+SIV    +S++A+AC +ILL+ P ILI DEGHTPRNE TDVL S
Sbjct: 498  WVAEKSILFLGYKQFSSIVCGDGASKAAMACQEILLKAPQILILDEGHTPRNENTDVLYS 557

Query: 1744 LAKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDTSQIIKRRVMSRVQISSGRRQ 1565
            LAKVQTPRKVVLSGTL+QNHVKEVFNILNLVRPKFLK ++S+ I +R+MS+V I   R+Q
Sbjct: 558  LAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAIVKRIMSKVDIMGVRKQ 617

Query: 1564 VKAGADALFFDTVEDTLQNDDNLRRKVTVIQDLREMTSNVLHYYKGDFLDELPGMVDFTV 1385
            +K+ A   F+D VE+TLQ DDN RRK+TVIQDLREMTS VLHYYKGDFLDELPG+VDFTV
Sbjct: 618  LKSNAADAFYDLVENTLQKDDNFRRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTV 677

Query: 1384 LLNLSPQQRRIIDSLKKVE-QFKRTAIGSAVSLHPMLKEISEGPAVGDKGC--RVNXXXX 1214
            LLNLS +Q++ + +L K E +FK+ ++GSAV LHP LK  +E  A  +            
Sbjct: 678  LLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEMTYQKKM 737

Query: 1213 XXXXXXXDVRDGVKAKFFVNILGLCESSGEKLLVFCKYLLPMKFLERLVVRTKGWRVGKE 1034
                   DVR+GVK KFF+N+L LC+S+GEKLLVF +YLLP++FLE+L ++  GW  GKE
Sbjct: 738  DEILEQLDVREGVKVKFFLNVLALCQSAGEKLLVFSQYLLPLRFLEKLTMKVNGWSSGKE 797

Query: 1033 IFMISGDXXXXXXXXXXXXXXXXSDARIFFGSIQACGEGISLVGASRILIMDVHLNPSVT 854
            IF+ISG+                 DAR+FFGSI+ACGEGISLVGASR+LI+DVHLNPSVT
Sbjct: 798  IFVISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVT 857

Query: 853  RQAIGRAFRPGQARKVFIYRLVASDSPEEANHHTSLRKELTSKLWFEWNEFSGNPNFEME 674
            RQAIGRAFRPGQ +KV +Y+LVA+DSPEE +H+T  +KEL SK+WFEWNE+ GN  FE E
Sbjct: 858  RQAIGRAFRPGQKKKVHVYKLVAADSPEEEDHNTCFKKELISKMWFEWNEYCGNHEFEAE 917

Query: 673  KVNLRNSGDEFWESPPLQEDVKDVYRR 593
             VN+ +SGD F ESP L+EDV  +Y+R
Sbjct: 918  TVNVSDSGDLFLESPLLREDVTVLYKR 944


>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 903

 Score =  548 bits (1413), Expect = e-153
 Identities = 278/447 (62%), Positives = 342/447 (76%), Gaps = 3/447 (0%)
 Frame = -3

Query: 1924 WVEHKGILFLGYSQFASIVSKSESSRSAVACHDILLQVPSILICDEGHTPRNEETDVLRS 1745
            WV  K ILFLGY QF+SIV    +S++ +AC +ILL+ P ILI DEGHTPRNE TDVL S
Sbjct: 457  WVAEKSILFLGYKQFSSIVCGDGASKATIACQEILLKAPQILILDEGHTPRNENTDVLYS 516

Query: 1744 LAKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDTSQIIKRRVMSRVQISSGRRQ 1565
            LAKVQTPRKVVLSGTL+QNHVKEVFNILNLVRPKFLK ++S+ + +R+MS+V I   R+Q
Sbjct: 517  LAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAVVKRIMSKVDIMGVRKQ 576

Query: 1564 VKAGADALFFDTVEDTLQNDDNLRRKVTVIQDLREMTSNVLHYYKGDFLDELPGMVDFTV 1385
            +K+ A   F+D VE+TLQ DDN RRK+TVIQDLREMTS VLHYYKGDFLDELPG+VDFTV
Sbjct: 577  LKSNAADAFYDLVENTLQKDDNFRRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTV 636

Query: 1384 LLNLSPQQRRIIDSLKKVE-QFKRTAIGSAVSLHPMLKEISEGPAVGDKGC--RVNXXXX 1214
            LLNLS +Q++ + +L K E +FK+ ++GSAV LHP LK  +E  A  +            
Sbjct: 637  LLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEMTCQKKM 696

Query: 1213 XXXXXXXDVRDGVKAKFFVNILGLCESSGEKLLVFCKYLLPMKFLERLVVRTKGWRVGKE 1034
                   DVRDGVKAKFF+N+L LC+SSGEKLLVF +YLLP++FLE+L ++ KGW  GKE
Sbjct: 697  DEILEQLDVRDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKE 756

Query: 1033 IFMISGDXXXXXXXXXXXXXXXXSDARIFFGSIQACGEGISLVGASRILIMDVHLNPSVT 854
            IF ISG+                 DAR+FFGSI+ACGEGISLVGASR+LI+DVHLNPSVT
Sbjct: 757  IFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVT 816

Query: 853  RQAIGRAFRPGQARKVFIYRLVASDSPEEANHHTSLRKELTSKLWFEWNEFSGNPNFEME 674
            RQAIGRAFRPGQ +KV +Y+LVA+DSPEE +H++  +KEL SK+WFEWNE+ G+  FE E
Sbjct: 817  RQAIGRAFRPGQKKKVHVYKLVAADSPEEEDHNSCFKKELISKMWFEWNEYCGHHEFEAE 876

Query: 673  KVNLRNSGDEFWESPPLQEDVKDVYRR 593
             V++ +SGD F ESP L+ED+  +YRR
Sbjct: 877  TVDVSDSGDLFLESPLLREDITVLYRR 903


>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  542 bits (1397), Expect = e-151
 Identities = 276/445 (62%), Positives = 338/445 (75%), Gaps = 1/445 (0%)
 Frame = -3

Query: 1924 WVEHKGILFLGYSQFASIVSKSESSRSAVACHDILLQVPSILICDEGHTPRNEETDVLRS 1745
            WVEHK ILFLGY QF++IV   E+S ++ AC +ILLQVP+ILI DEGHTPRNE TD L++
Sbjct: 466  WVEHKSILFLGYKQFSTIVCDVETSAASTACQNILLQVPTILILDEGHTPRNENTDTLQT 525

Query: 1744 LAKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDTSQIIKRRVMSRVQISSGRRQ 1565
            LAKV+TPRKVVLSGTL+QNHVKEVFNI+NLVRPKF++S+TS+ I +R+MSRV I   R+Q
Sbjct: 526  LAKVRTPRKVVLSGTLYQNHVKEVFNIVNLVRPKFMRSETSRPIIKRIMSRVDIPGARKQ 585

Query: 1564 VKAGADALFFDTVEDTLQNDDNLRRKVTVIQDLREMTSNVLHYYKGDFLDELPGMVDFTV 1385
             KAG DA F+D VE TLQ D + RRKV+VI DLREMTS +LHYYKGDFLDELPG+VDFTV
Sbjct: 586  FKAGVDAAFYDLVEHTLQKDTDFRRKVSVIHDLREMTSKILHYYKGDFLDELPGLVDFTV 645

Query: 1384 LLNLSPQQRRIIDSLKKV-EQFKRTAIGSAVSLHPMLKEISEGPAVGDKGCRVNXXXXXX 1208
            +LNL+ +Q+   + +KK   +FK ++ GSAV LHP L   S   AV D            
Sbjct: 646  VLNLTSKQKHEGEKVKKFNRKFKISSAGSAVYLHPKLNVFSVNAAVTD-------DKIDE 698

Query: 1207 XXXXXDVRDGVKAKFFVNILGLCESSGEKLLVFCKYLLPMKFLERLVVRTKGWRVGKEIF 1028
                 DV+DGVK KFF+N+L LC ++GEKLLVF +YLLP+KF+ERLVV+ KGW  G+E F
Sbjct: 699  VIDKMDVKDGVKTKFFLNLLNLCATTGEKLLVFSQYLLPLKFMERLVVQKKGWSPGRETF 758

Query: 1027 MISGDXXXXXXXXXXXXXXXXSDARIFFGSIQACGEGISLVGASRILIMDVHLNPSVTRQ 848
            MISG+                 DAR+FFGSI+ACGEGISLVGASRI+I+DVHLNPSVTRQ
Sbjct: 759  MISGETTPEQREWSMERFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQ 818

Query: 847  AIGRAFRPGQARKVFIYRLVASDSPEEANHHTSLRKELTSKLWFEWNEFSGNPNFEMEKV 668
            AIGRAFRPGQ +KVF YRLVA DSPEE +H T  +KEL +K+WFEWNE+ G  +FE+E V
Sbjct: 819  AIGRAFRPGQTKKVFAYRLVAGDSPEEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVETV 878

Query: 667  NLRNSGDEFWESPPLQEDVKDVYRR 593
            +++  GD F E+P L +DVK +YRR
Sbjct: 879  DVKQCGDNFLETPLLGQDVKVLYRR 903


>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A containing DEAD/H box
            1B-like [Cucumis sativus]
          Length = 903

 Score =  542 bits (1397), Expect = e-151
 Identities = 276/445 (62%), Positives = 338/445 (75%), Gaps = 1/445 (0%)
 Frame = -3

Query: 1924 WVEHKGILFLGYSQFASIVSKSESSRSAVACHDILLQVPSILICDEGHTPRNEETDVLRS 1745
            WVEHK ILFLGY QF++IV   E+S ++ AC +ILLQVP+ILI DEGHTPRNE TD L++
Sbjct: 466  WVEHKSILFLGYKQFSTIVCDVETSAASTACQNILLQVPTILILDEGHTPRNENTDTLQT 525

Query: 1744 LAKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDTSQIIKRRVMSRVQISSGRRQ 1565
            LAKV+TPRKVVLSGTL+QNHVKEVFNI+NLVRPKF++S+TS+ I +R+MSRV I   R+Q
Sbjct: 526  LAKVRTPRKVVLSGTLYQNHVKEVFNIVNLVRPKFMRSETSRPIIKRIMSRVDIPGARKQ 585

Query: 1564 VKAGADALFFDTVEDTLQNDDNLRRKVTVIQDLREMTSNVLHYYKGDFLDELPGMVDFTV 1385
             KAG DA F+D VE TLQ D + RRKV+VI DLREMTS +LHYYKGDFLDELPG+VDFTV
Sbjct: 586  FKAGVDAAFYDLVEHTLQKDTDFRRKVSVIHDLREMTSKILHYYKGDFLDELPGLVDFTV 645

Query: 1384 LLNLSPQQRRIIDSLKKV-EQFKRTAIGSAVSLHPMLKEISEGPAVGDKGCRVNXXXXXX 1208
            +LNL+ +Q+   + +KK   +FK ++ GSAV LHP L   S   AV D            
Sbjct: 646  VLNLTSKQKHEGEKVKKFNRKFKISSAGSAVYLHPKLNVFSVNAAVTD-------DKIDE 698

Query: 1207 XXXXXDVRDGVKAKFFVNILGLCESSGEKLLVFCKYLLPMKFLERLVVRTKGWRVGKEIF 1028
                 DV+DGVK KFF+N+L LC ++GEKLLVF +YLLP+KF+ERLVV+ KGW  G+E F
Sbjct: 699  VIDKMDVKDGVKTKFFLNLLNLCATTGEKLLVFSQYLLPLKFMERLVVQKKGWSPGRETF 758

Query: 1027 MISGDXXXXXXXXXXXXXXXXSDARIFFGSIQACGEGISLVGASRILIMDVHLNPSVTRQ 848
            MISG+                 DAR+FFGSI+ACGEGISLVGASRI+I+DVHLNPSVTRQ
Sbjct: 759  MISGETTPEQREWSMERFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQ 818

Query: 847  AIGRAFRPGQARKVFIYRLVASDSPEEANHHTSLRKELTSKLWFEWNEFSGNPNFEMEKV 668
            AIGRAFRPGQ +KVF YRLVA DSPEE +H T  +KEL +K+WFEWNE+ G  +FE+E V
Sbjct: 819  AIGRAFRPGQTKKVFAYRLVAGDSPEEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVETV 878

Query: 667  NLRNSGDEFWESPPLQEDVKDVYRR 593
            +++  GD F E+P L +DVK +YRR
Sbjct: 879  DVKQCGDNFLETPLLGQDVKVLYRR 903


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