BLASTX nr result
ID: Coptis24_contig00017324
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00017324
(1926 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera] 551 e-154
ref|XP_002275596.1| PREDICTED: DNA repair and recombination prot... 549 e-154
ref|XP_002273814.1| PREDICTED: DNA repair and recombination prot... 548 e-153
ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated... 542 e-151
ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated... 542 e-151
>emb|CAN62867.1| hypothetical protein VITISV_015925 [Vitis vinifera]
Length = 1187
Score = 551 bits (1419), Expect = e-154
Identities = 279/447 (62%), Positives = 343/447 (76%), Gaps = 3/447 (0%)
Frame = -3
Query: 1924 WVEHKGILFLGYSQFASIVSKSESSRSAVACHDILLQVPSILICDEGHTPRNEETDVLRS 1745
WV K ILFLGY QF+SIV +S++ +AC +ILL+ P ILI DEGHTPRNE TDVL S
Sbjct: 683 WVAEKSILFLGYKQFSSIVCGDGASKATIACQEILLKAPQILILDEGHTPRNENTDVLYS 742
Query: 1744 LAKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDTSQIIKRRVMSRVQISSGRRQ 1565
LAKVQTPRKVVLSGTL+QNHVKEVFNILNLVRPKFLK ++S+ + +R+MS+V I R+Q
Sbjct: 743 LAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAVVKRIMSKVDIMGVRKQ 802
Query: 1564 VKAGADALFFDTVEDTLQNDDNLRRKVTVIQDLREMTSNVLHYYKGDFLDELPGMVDFTV 1385
+K+ A F+D VE+TLQ DDN RRK+TVIQDLREMTS VLHYYKGDFLDELPG+VDFTV
Sbjct: 803 LKSNAADAFYDLVENTLQKDDNFRRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTV 862
Query: 1384 LLNLSPQQRRIIDSLKKVE-QFKRTAIGSAVSLHPMLKEISEGPAVGDKGC--RVNXXXX 1214
LLNLS +Q++ + +L K E +FK+ ++GSAV LHP LK +E A +
Sbjct: 863 LLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEMTCQKKM 922
Query: 1213 XXXXXXXDVRDGVKAKFFVNILGLCESSGEKLLVFCKYLLPMKFLERLVVRTKGWRVGKE 1034
DVRDGVKAKFF+N+L LC+SSGEKLLVF +YLLP++FLE+L ++ KGW GKE
Sbjct: 923 DEILEQLDVRDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKE 982
Query: 1033 IFMISGDXXXXXXXXXXXXXXXXSDARIFFGSIQACGEGISLVGASRILIMDVHLNPSVT 854
IF ISG+ DAR+FFGSI+ACGEGISLVGASR+LI+DVHLNPSVT
Sbjct: 983 IFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVT 1042
Query: 853 RQAIGRAFRPGQARKVFIYRLVASDSPEEANHHTSLRKELTSKLWFEWNEFSGNPNFEME 674
RQAIGRAFRPGQ +KV +Y+LVA+DSPEE +H++ +KEL SK+WFEWNE+ G+ FE E
Sbjct: 1043 RQAIGRAFRPGQKKKVHVYKLVAADSPEEEDHNSCFKKELISKMWFEWNEYCGHHEFEAE 1102
Query: 673 KVNLRNSGDEFWESPPLQEDVKDVYRR 593
V++ +SGD F ESP L+ED+K +YRR
Sbjct: 1103 TVDVSDSGDIFLESPLLREDIKVLYRR 1129
>ref|XP_002275596.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 944
Score = 549 bits (1415), Expect = e-154
Identities = 279/447 (62%), Positives = 342/447 (76%), Gaps = 3/447 (0%)
Frame = -3
Query: 1924 WVEHKGILFLGYSQFASIVSKSESSRSAVACHDILLQVPSILICDEGHTPRNEETDVLRS 1745
WV K ILFLGY QF+SIV +S++A+AC +ILL+ P ILI DEGHTPRNE TDVL S
Sbjct: 498 WVAEKSILFLGYKQFSSIVCGDGASKAAMACQEILLKAPQILILDEGHTPRNENTDVLYS 557
Query: 1744 LAKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDTSQIIKRRVMSRVQISSGRRQ 1565
LAKVQTPRKVVLSGTL+QNHVKEVFNILNLVRPKFLK ++S+ I +R+MS+V I R+Q
Sbjct: 558 LAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAIVKRIMSKVDIMGVRKQ 617
Query: 1564 VKAGADALFFDTVEDTLQNDDNLRRKVTVIQDLREMTSNVLHYYKGDFLDELPGMVDFTV 1385
+K+ A F+D VE+TLQ DDN RRK+TVIQDLREMTS VLHYYKGDFLDELPG+VDFTV
Sbjct: 618 LKSNAADAFYDLVENTLQKDDNFRRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTV 677
Query: 1384 LLNLSPQQRRIIDSLKKVE-QFKRTAIGSAVSLHPMLKEISEGPAVGDKGC--RVNXXXX 1214
LLNLS +Q++ + +L K E +FK+ ++GSAV LHP LK +E A +
Sbjct: 678 LLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEMTYQKKM 737
Query: 1213 XXXXXXXDVRDGVKAKFFVNILGLCESSGEKLLVFCKYLLPMKFLERLVVRTKGWRVGKE 1034
DVR+GVK KFF+N+L LC+S+GEKLLVF +YLLP++FLE+L ++ GW GKE
Sbjct: 738 DEILEQLDVREGVKVKFFLNVLALCQSAGEKLLVFSQYLLPLRFLEKLTMKVNGWSSGKE 797
Query: 1033 IFMISGDXXXXXXXXXXXXXXXXSDARIFFGSIQACGEGISLVGASRILIMDVHLNPSVT 854
IF+ISG+ DAR+FFGSI+ACGEGISLVGASR+LI+DVHLNPSVT
Sbjct: 798 IFVISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVT 857
Query: 853 RQAIGRAFRPGQARKVFIYRLVASDSPEEANHHTSLRKELTSKLWFEWNEFSGNPNFEME 674
RQAIGRAFRPGQ +KV +Y+LVA+DSPEE +H+T +KEL SK+WFEWNE+ GN FE E
Sbjct: 858 RQAIGRAFRPGQKKKVHVYKLVAADSPEEEDHNTCFKKELISKMWFEWNEYCGNHEFEAE 917
Query: 673 KVNLRNSGDEFWESPPLQEDVKDVYRR 593
VN+ +SGD F ESP L+EDV +Y+R
Sbjct: 918 TVNVSDSGDLFLESPLLREDVTVLYKR 944
>ref|XP_002273814.1| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 903
Score = 548 bits (1413), Expect = e-153
Identities = 278/447 (62%), Positives = 342/447 (76%), Gaps = 3/447 (0%)
Frame = -3
Query: 1924 WVEHKGILFLGYSQFASIVSKSESSRSAVACHDILLQVPSILICDEGHTPRNEETDVLRS 1745
WV K ILFLGY QF+SIV +S++ +AC +ILL+ P ILI DEGHTPRNE TDVL S
Sbjct: 457 WVAEKSILFLGYKQFSSIVCGDGASKATIACQEILLKAPQILILDEGHTPRNENTDVLYS 516
Query: 1744 LAKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDTSQIIKRRVMSRVQISSGRRQ 1565
LAKVQTPRKVVLSGTL+QNHVKEVFNILNLVRPKFLK ++S+ + +R+MS+V I R+Q
Sbjct: 517 LAKVQTPRKVVLSGTLYQNHVKEVFNILNLVRPKFLKLESSRAVVKRIMSKVDIMGVRKQ 576
Query: 1564 VKAGADALFFDTVEDTLQNDDNLRRKVTVIQDLREMTSNVLHYYKGDFLDELPGMVDFTV 1385
+K+ A F+D VE+TLQ DDN RRK+TVIQDLREMTS VLHYYKGDFLDELPG+VDFTV
Sbjct: 577 LKSNAADAFYDLVENTLQKDDNFRRKITVIQDLREMTSKVLHYYKGDFLDELPGLVDFTV 636
Query: 1384 LLNLSPQQRRIIDSLKKVE-QFKRTAIGSAVSLHPMLKEISEGPAVGDKGC--RVNXXXX 1214
LLNLS +Q++ + +L K E +FK+ ++GSAV LHP LK +E A +
Sbjct: 637 LLNLSARQKKEVGNLNKFERKFKKNSVGSAVYLHPQLKYFAEKLAANESKTDEMTCQKKM 696
Query: 1213 XXXXXXXDVRDGVKAKFFVNILGLCESSGEKLLVFCKYLLPMKFLERLVVRTKGWRVGKE 1034
DVRDGVKAKFF+N+L LC+SSGEKLLVF +YLLP++FLE+L ++ KGW GKE
Sbjct: 697 DEILEQLDVRDGVKAKFFLNVLALCQSSGEKLLVFSQYLLPLRFLEKLTMKVKGWSPGKE 756
Query: 1033 IFMISGDXXXXXXXXXXXXXXXXSDARIFFGSIQACGEGISLVGASRILIMDVHLNPSVT 854
IF ISG+ DAR+FFGSI+ACGEGISLVGASR+LI+DVHLNPSVT
Sbjct: 757 IFAISGESSSEQREWSMERFNTSPDARVFFGSIKACGEGISLVGASRVLILDVHLNPSVT 816
Query: 853 RQAIGRAFRPGQARKVFIYRLVASDSPEEANHHTSLRKELTSKLWFEWNEFSGNPNFEME 674
RQAIGRAFRPGQ +KV +Y+LVA+DSPEE +H++ +KEL SK+WFEWNE+ G+ FE E
Sbjct: 817 RQAIGRAFRPGQKKKVHVYKLVAADSPEEEDHNSCFKKELISKMWFEWNEYCGHHEFEAE 876
Query: 673 KVNLRNSGDEFWESPPLQEDVKDVYRR 593
V++ +SGD F ESP L+ED+ +YRR
Sbjct: 877 TVDVSDSGDLFLESPLLREDITVLYRR 903
>ref|XP_004170971.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H box
1B-like [Cucumis sativus]
Length = 903
Score = 542 bits (1397), Expect = e-151
Identities = 276/445 (62%), Positives = 338/445 (75%), Gaps = 1/445 (0%)
Frame = -3
Query: 1924 WVEHKGILFLGYSQFASIVSKSESSRSAVACHDILLQVPSILICDEGHTPRNEETDVLRS 1745
WVEHK ILFLGY QF++IV E+S ++ AC +ILLQVP+ILI DEGHTPRNE TD L++
Sbjct: 466 WVEHKSILFLGYKQFSTIVCDVETSAASTACQNILLQVPTILILDEGHTPRNENTDTLQT 525
Query: 1744 LAKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDTSQIIKRRVMSRVQISSGRRQ 1565
LAKV+TPRKVVLSGTL+QNHVKEVFNI+NLVRPKF++S+TS+ I +R+MSRV I R+Q
Sbjct: 526 LAKVRTPRKVVLSGTLYQNHVKEVFNIVNLVRPKFMRSETSRPIIKRIMSRVDIPGARKQ 585
Query: 1564 VKAGADALFFDTVEDTLQNDDNLRRKVTVIQDLREMTSNVLHYYKGDFLDELPGMVDFTV 1385
KAG DA F+D VE TLQ D + RRKV+VI DLREMTS +LHYYKGDFLDELPG+VDFTV
Sbjct: 586 FKAGVDAAFYDLVEHTLQKDTDFRRKVSVIHDLREMTSKILHYYKGDFLDELPGLVDFTV 645
Query: 1384 LLNLSPQQRRIIDSLKKV-EQFKRTAIGSAVSLHPMLKEISEGPAVGDKGCRVNXXXXXX 1208
+LNL+ +Q+ + +KK +FK ++ GSAV LHP L S AV D
Sbjct: 646 VLNLTSKQKHEGEKVKKFNRKFKISSAGSAVYLHPKLNVFSVNAAVTD-------DKIDE 698
Query: 1207 XXXXXDVRDGVKAKFFVNILGLCESSGEKLLVFCKYLLPMKFLERLVVRTKGWRVGKEIF 1028
DV+DGVK KFF+N+L LC ++GEKLLVF +YLLP+KF+ERLVV+ KGW G+E F
Sbjct: 699 VIDKMDVKDGVKTKFFLNLLNLCATTGEKLLVFSQYLLPLKFMERLVVQKKGWSPGRETF 758
Query: 1027 MISGDXXXXXXXXXXXXXXXXSDARIFFGSIQACGEGISLVGASRILIMDVHLNPSVTRQ 848
MISG+ DAR+FFGSI+ACGEGISLVGASRI+I+DVHLNPSVTRQ
Sbjct: 759 MISGETTPEQREWSMERFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQ 818
Query: 847 AIGRAFRPGQARKVFIYRLVASDSPEEANHHTSLRKELTSKLWFEWNEFSGNPNFEMEKV 668
AIGRAFRPGQ +KVF YRLVA DSPEE +H T +KEL +K+WFEWNE+ G +FE+E V
Sbjct: 819 AIGRAFRPGQTKKVFAYRLVAGDSPEEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVETV 878
Query: 667 NLRNSGDEFWESPPLQEDVKDVYRR 593
+++ GD F E+P L +DVK +YRR
Sbjct: 879 DVKQCGDNFLETPLLGQDVKVLYRR 903
>ref|XP_004150074.1| PREDICTED: SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin subfamily A containing DEAD/H box
1B-like [Cucumis sativus]
Length = 903
Score = 542 bits (1397), Expect = e-151
Identities = 276/445 (62%), Positives = 338/445 (75%), Gaps = 1/445 (0%)
Frame = -3
Query: 1924 WVEHKGILFLGYSQFASIVSKSESSRSAVACHDILLQVPSILICDEGHTPRNEETDVLRS 1745
WVEHK ILFLGY QF++IV E+S ++ AC +ILLQVP+ILI DEGHTPRNE TD L++
Sbjct: 466 WVEHKSILFLGYKQFSTIVCDVETSAASTACQNILLQVPTILILDEGHTPRNENTDTLQT 525
Query: 1744 LAKVQTPRKVVLSGTLFQNHVKEVFNILNLVRPKFLKSDTSQIIKRRVMSRVQISSGRRQ 1565
LAKV+TPRKVVLSGTL+QNHVKEVFNI+NLVRPKF++S+TS+ I +R+MSRV I R+Q
Sbjct: 526 LAKVRTPRKVVLSGTLYQNHVKEVFNIVNLVRPKFMRSETSRPIIKRIMSRVDIPGARKQ 585
Query: 1564 VKAGADALFFDTVEDTLQNDDNLRRKVTVIQDLREMTSNVLHYYKGDFLDELPGMVDFTV 1385
KAG DA F+D VE TLQ D + RRKV+VI DLREMTS +LHYYKGDFLDELPG+VDFTV
Sbjct: 586 FKAGVDAAFYDLVEHTLQKDTDFRRKVSVIHDLREMTSKILHYYKGDFLDELPGLVDFTV 645
Query: 1384 LLNLSPQQRRIIDSLKKV-EQFKRTAIGSAVSLHPMLKEISEGPAVGDKGCRVNXXXXXX 1208
+LNL+ +Q+ + +KK +FK ++ GSAV LHP L S AV D
Sbjct: 646 VLNLTSKQKHEGEKVKKFNRKFKISSAGSAVYLHPKLNVFSVNAAVTD-------DKIDE 698
Query: 1207 XXXXXDVRDGVKAKFFVNILGLCESSGEKLLVFCKYLLPMKFLERLVVRTKGWRVGKEIF 1028
DV+DGVK KFF+N+L LC ++GEKLLVF +YLLP+KF+ERLVV+ KGW G+E F
Sbjct: 699 VIDKMDVKDGVKTKFFLNLLNLCATTGEKLLVFSQYLLPLKFMERLVVQKKGWSPGRETF 758
Query: 1027 MISGDXXXXXXXXXXXXXXXXSDARIFFGSIQACGEGISLVGASRILIMDVHLNPSVTRQ 848
MISG+ DAR+FFGSI+ACGEGISLVGASRI+I+DVHLNPSVTRQ
Sbjct: 759 MISGETTPEQREWSMERFNNSPDARVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQ 818
Query: 847 AIGRAFRPGQARKVFIYRLVASDSPEEANHHTSLRKELTSKLWFEWNEFSGNPNFEMEKV 668
AIGRAFRPGQ +KVF YRLVA DSPEE +H T +KEL +K+WFEWNE+ G +FE+E V
Sbjct: 819 AIGRAFRPGQTKKVFAYRLVAGDSPEEGDHSTCFKKELIAKMWFEWNEYCGYHDFEVETV 878
Query: 667 NLRNSGDEFWESPPLQEDVKDVYRR 593
+++ GD F E+P L +DVK +YRR
Sbjct: 879 DVKQCGDNFLETPLLGQDVKVLYRR 903