BLASTX nr result

ID: Coptis24_contig00017310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017310
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314843.1| predicted protein [Populus trichocarpa] gi|2...    56   4e-06

>ref|XP_002314843.1| predicted protein [Populus trichocarpa] gi|222863883|gb|EEF01014.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/57 (43%), Positives = 31/57 (54%)
 Frame = +2

Query: 2   VDTIRNGSLGTTVYRNFIDEFLNKGFHLRWTASRCEDCSDSGGRCGFDYGMQKFMCF 172
           VD  R  ++G        +  L +GF L WTAS C DC +SGG+CGFD     F CF
Sbjct: 194 VDVYRGENVGA-------ERMLERGFVLNWTASNCSDCEESGGKCGFDTATYDFKCF 243


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