BLASTX nr result

ID: Coptis24_contig00017290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017290
         (1008 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosyl...   300   3e-79
emb|CBI25679.3| unnamed protein product [Vitis vinifera]              300   3e-79
emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]   288   2e-75
ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|2...   279   9e-73
ref|XP_003528811.1| PREDICTED: A/G-specific adenine DNA glycosyl...   273   4e-71

>ref|XP_002265027.2| PREDICTED: A/G-specific adenine DNA glycosylase [Vitis vinifera]
          Length = 464

 Score =  300 bits (769), Expect = 3e-79
 Identities = 149/238 (62%), Positives = 184/238 (77%), Gaps = 4/238 (1%)
 Frame = +1

Query: 4   ISANLKASATIKTFWKLAGQLVDPCRPGDFNQALMELGATICTPSSPGCSVCPISGQCRA 183
           IS+N K SATIK  W+LAGQLVDPC+PGDFNQALMELGATICTP  P CS CP+S QC  
Sbjct: 206 ISSNPKHSATIKNIWRLAGQLVDPCKPGDFNQALMELGATICTPLKPICSACPVSDQCSV 265

Query: 184 FSLSKGHNSVIVTGYPTRVPKTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRP 363
            S+S+ H S++VT YP +V K K+R +F AV VV+IL++Q  D  +G++ N+ FLLVKRP
Sbjct: 266 LSMSESHRSILVTDYPVKVVKAKKRHDFSAVSVVKILEEQ--DISKGSQYNSRFLLVKRP 323

Query: 364 DEGLLAGLWEFPSVLMDGEAVLTVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIF 543
           +EGLLAGLWEFPSVL+DGEA    RR+ ID++L KSFKLDTKK C I+SR  VGEC+H+F
Sbjct: 324 NEGLLAGLWEFPSVLLDGEADGATRRKRIDRFL-KSFKLDTKKNCRIVSREDVGECVHVF 382

Query: 544 SHIRLRMYVELLILRLKGGASFFYGKEE----AWKCVDSHSIQSIGLTSGVRKVYNMV 705
           +HI L MYVELL+L LKGG    Y  E+     W+ +DS ++ S+GLTSGVRKVYNM+
Sbjct: 383 THIHLTMYVELLVLHLKGGMKISYENEDKETMTWRWIDSEALSSMGLTSGVRKVYNMI 440


>emb|CBI25679.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  300 bits (769), Expect = 3e-79
 Identities = 149/238 (62%), Positives = 184/238 (77%), Gaps = 4/238 (1%)
 Frame = +1

Query: 4   ISANLKASATIKTFWKLAGQLVDPCRPGDFNQALMELGATICTPSSPGCSVCPISGQCRA 183
           IS+N K SATIK  W+LAGQLVDPC+PGDFNQALMELGATICTP  P CS CP+S QC  
Sbjct: 248 ISSNPKHSATIKNIWRLAGQLVDPCKPGDFNQALMELGATICTPLKPICSACPVSDQCSV 307

Query: 184 FSLSKGHNSVIVTGYPTRVPKTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRP 363
            S+S+ H S++VT YP +V K K+R +F AV VV+IL++Q  D  +G++ N+ FLLVKRP
Sbjct: 308 LSMSESHRSILVTDYPVKVVKAKKRHDFSAVSVVKILEEQ--DISKGSQYNSRFLLVKRP 365

Query: 364 DEGLLAGLWEFPSVLMDGEAVLTVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIF 543
           +EGLLAGLWEFPSVL+DGEA    RR+ ID++L KSFKLDTKK C I+SR  VGEC+H+F
Sbjct: 366 NEGLLAGLWEFPSVLLDGEADGATRRKRIDRFL-KSFKLDTKKNCRIVSREDVGECVHVF 424

Query: 544 SHIRLRMYVELLILRLKGGASFFYGKEE----AWKCVDSHSIQSIGLTSGVRKVYNMV 705
           +HI L MYVELL+L LKGG    Y  E+     W+ +DS ++ S+GLTSGVRKVYNM+
Sbjct: 425 THIHLTMYVELLVLHLKGGMKISYENEDKETMTWRWIDSEALSSMGLTSGVRKVYNMI 482


>emb|CAN71629.1| hypothetical protein VITISV_015579 [Vitis vinifera]
          Length = 1031

 Score =  288 bits (736), Expect = 2e-75
 Identities = 149/260 (57%), Positives = 184/260 (70%), Gaps = 26/260 (10%)
 Frame = +1

Query: 4    ISANLKASATIKTFWKLAGQLVDPCRPGDFNQALMELGATICTPSSPGCSVCPISGQCRA 183
            IS+N K SATIK  W+LAGQLVDPC+PGDFNQALMELGATICTP  P CS CP+S QC  
Sbjct: 751  ISSNPKHSATIKNIWRLAGQLVDPCKPGDFNQALMELGATICTPLKPICSACPVSDQCSV 810

Query: 184  FSLSKGHNSVIVTGYPTRVPKTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRP 363
             S+S+ H S++VT YP +V K K+R +F AV VV+IL++Q  D  +G++ N+ FLLVKRP
Sbjct: 811  LSMSESHRSILVTDYPVKVVKAKKRHDFSAVSVVKILEEQ--DISKGSQYNSRFLLVKRP 868

Query: 364  DEGLLAGLWEFPSVLMDGEAVLTVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIF 543
            +EGLLAGLWEFPSVL+DGEA    RR+ ID++L KSFKLDTKK C I+SR  VGEC+H+F
Sbjct: 869  NEGLLAGLWEFPSVLLDGEADGATRRKRIDRFL-KSFKLDTKKNCRIVSREDVGECVHVF 927

Query: 544  SHIRLRMYVELLILRLK----------------------GGASFFYGKEE----AWKCVD 645
            +HI L MYVELL+L LK                      GG    Y  E+     W+ +D
Sbjct: 928  THIHLTMYVELLVLHLKGLGLLINSHSQICMSVYVSLYPGGMKISYENEDKETMTWRWID 987

Query: 646  SHSIQSIGLTSGVRKVYNMV 705
            S ++ S+GLTSGVRKVYNM+
Sbjct: 988  SEALSSMGLTSGVRKVYNMI 1007


>ref|XP_002321221.1| predicted protein [Populus trichocarpa] gi|222861994|gb|EEE99536.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  279 bits (713), Expect = 9e-73
 Identities = 139/234 (59%), Positives = 175/234 (74%), Gaps = 4/234 (1%)
 Frame = +1

Query: 4   ISANLKASATIKTFWKLAGQLVDPCRPGDFNQALMELGATICTPSSPGCSVCPISGQCRA 183
           ISAN K   T+K FWKLA QLVDP RPGDFNQ+LMELGAT+CTP +P CS CP+SGQCRA
Sbjct: 210 ISANPKDKVTVKKFWKLAAQLVDPHRPGDFNQSLMELGATLCTPVNPSCSSCPVSGQCRA 269

Query: 184 FSLSKGHNSVIVTGYPTRVPKTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRP 363
            ++SK    V++T YP +  K KQR EF AVC VEI    R D   G + ++VFLLVKRP
Sbjct: 270 LTISKLDKLVLITDYPAKSIKLKQRHEFSAVCAVEITG--RQDLIEGDQSSSVFLLVKRP 327

Query: 364 DEGLLAGLWEFPSVLMDGEAVLTVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIF 543
           DEGLLAGLWEFPSV++  EA +T RR+ ++++LKKSF+LD +K C++L R  +GE +HIF
Sbjct: 328 DEGLLAGLWEFPSVMLGKEADMTRRRKEMNRFLKKSFRLDPQKTCSVLLREDIGEFIHIF 387

Query: 544 SHIRLRMYVELLILRLKGGASFFYGKEE----AWKCVDSHSIQSIGLTSGVRKV 693
           +HIRL++YVELLI+ LKG  S  + K+      WKCVD  ++ S+GLTSGVRKV
Sbjct: 388 THIRLKVYVELLIVHLKGDMSDLFSKQSRENMTWKCVDREALSSLGLTSGVRKV 441


>ref|XP_003528811.1| PREDICTED: A/G-specific adenine DNA glycosylase-like [Glycine max]
          Length = 471

 Score =  273 bits (699), Expect = 4e-71
 Identities = 138/237 (58%), Positives = 176/237 (74%), Gaps = 3/237 (1%)
 Frame = +1

Query: 4   ISANLKASATIKTFWKLAGQLVDPCRPGDFNQALMELGATICTPSSPGCSVCPISGQCRA 183
           ISAN K SATIK FWKLA QLVDP RPGDFNQALMELGAT+CTP +P CS CP S  C A
Sbjct: 213 ISANPKDSATIKKFWKLAAQLVDPVRPGDFNQALMELGATVCTPLNPSCSSCPASEFCHA 272

Query: 184 FSLSKGHNSVIVTGYPTRVPKTKQRLEFCAVCVVEILDDQRPDTPRGARRNNVFLLVKRP 363
            S +K  ++V VT YP +  K KQR +F AVCVVE++     +T    + ++ F+LVKRP
Sbjct: 273 LSNAKHDSTVAVTDYPVKGVKVKQRCDFSAVCVVELVG---AETLNKNQSSSKFILVKRP 329

Query: 364 DEGLLAGLWEFPSVLMDGEAVLTVRRQAIDQYLKKSFKLDTKKMCTILSRNHVGECMHIF 543
           +EGLLAGLWEFPSVL+DGEAV   RR+A+D++L+K+ K+D +K C I+ R  +GE +HIF
Sbjct: 330 EEGLLAGLWEFPSVLLDGEAVPLARREAMDRFLEKNLKIDIRKTCNIVLREDIGEFVHIF 389

Query: 544 SHIRLRMYVELLILRLKGGASFFY---GKEEAWKCVDSHSIQSIGLTSGVRKVYNMV 705
           SHIRL++YVELL+L+LK G    +     +  WKCV S+++ S+GLT+ VRKVYNMV
Sbjct: 390 SHIRLKLYVELLVLQLKVGVDDLFKSPDNKTTWKCVYSNALSSMGLTTSVRKVYNMV 446


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