BLASTX nr result

ID: Coptis24_contig00017289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017289
         (1329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278560.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   455   e-125
ref|XP_002533700.1| amsh, putative [Ricinus communis] gi|2235263...   441   e-121
ref|XP_002321479.1| predicted protein [Populus trichocarpa] gi|2...   423   e-116
ref|XP_003528952.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   404   e-110
ref|XP_003525234.1| PREDICTED: AMSH-like ubiquitin thiolesterase...   401   e-109

>ref|XP_002278560.1| PREDICTED: AMSH-like ubiquitin thiolesterase 1 [Vitis vinifera]
            gi|297734223|emb|CBI15470.3| unnamed protein product
            [Vitis vinifera]
          Length = 506

 Score =  455 bits (1171), Expect = e-125
 Identities = 247/426 (57%), Positives = 306/426 (71%), Gaps = 4/426 (0%)
 Frame = -2

Query: 1268 MKTSNGGFSIAANVPRRDVDNRISLRYYYRIADNLLRQANIFREEKNVLDLFVMLMRFSS 1089
            M+ S+GG +IAA+  + DVDNRISLRYYYRIADN+L+QA+IFREEKN++DL++ML+RFSS
Sbjct: 1    MRPSSGGINIAASAQKLDVDNRISLRYYYRIADNILKQADIFREEKNIIDLYIMLLRFSS 60

Query: 1088 LITETIPCHKDYKVYSQREKDVFXXXXXXXXXXXXXXKPVVQERTDKINGLATTQVDRWG 909
            L +ETIPCH+DYK   Q +K+                KP V+++ D++N   T QV+RWG
Sbjct: 61   LTSETIPCHRDYKASLQSKKNYLKKNLLRALCELEELKPAVRQKIDELNQKHTYQVNRWG 120

Query: 908  HHQSNYRDSSLEWPPVKKQLPKYNEIRKTPRYVGS--EGTGSLVQQDKFSLSKPMEEQYR 735
                   DSSLEWP V+KQ    +E+ KTPR      E  GS +QQ  FS +KP+EEQ+R
Sbjct: 121  ------ADSSLEWPHVRKQTLTKHEMTKTPRPTARDFEYQGSKIQQ--FSRAKPVEEQFR 172

Query: 734  KVNLNIPRPKEETLSRHSILGPNGLRGQWQPPTSNIGARYPSNIDLTPIEIPSLQKPVED 555
            ++++ I RP+EETLSRHSILGPNGL GQWQPPT +   +YPSN+DLTP++ PSLQ  VED
Sbjct: 173  RLSVGILRPREETLSRHSILGPNGLHGQWQPPTIDKRVQYPSNLDLTPVQFPSLQHHVED 232

Query: 554  NVFIQKD-TSSDLERSTLESVLSLNVDGHSLLTEELCSAPTSSLDTGLMELDMQTSIIRQ 378
             +    + +SS+ E+S+LESVL+LN D      EEL      SL +        T IIRQ
Sbjct: 233  GLMNNNEASSSEHEQSSLESVLTLNEDNQIHPAEEL-----GSLISFETTETPHTEIIRQ 287

Query: 377  PSPSPVLAEVQDLMPVTSPQVSNSVSEFAT-LPDELARSKCPLQLHISTTMMEHFLSLAK 201
            PSP PVLA+VQDL+P T  QVS    +  T   D L  S+ PL++HIST +ME FL LAK
Sbjct: 288  PSPPPVLADVQDLIPETPTQVSEVNGQMETPSTDGLVCSEAPLEMHISTVLMESFLKLAK 347

Query: 200  SNTDKNLETCGILAGSLKNRKFFITALIIPKQESTSDSCQATNEEEIFDVQDKQSLFQLG 21
            SNT +NLETCGILAGSLKNRKF++TALIIPKQESTSDSCQ TNEEEIF+VQDKQSLF LG
Sbjct: 348  SNTVRNLETCGILAGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLG 407

Query: 20   WIHTHP 3
            WIHTHP
Sbjct: 408  WIHTHP 413


>ref|XP_002533700.1| amsh, putative [Ricinus communis] gi|223526395|gb|EEF28683.1| amsh,
            putative [Ricinus communis]
          Length = 514

 Score =  441 bits (1135), Expect = e-121
 Identities = 232/423 (54%), Positives = 305/423 (72%), Gaps = 6/423 (1%)
 Frame = -2

Query: 1253 GGFSIAANVPRRDVDNRISLRYYYRIADNLLRQANIFREEKNVLDLFVMLMRFSSLITET 1074
            G  +IA +  + DVDNRISLR+YYRIADN+L+QA+IFREEKN++DL++ML+RFSSL++ET
Sbjct: 8    GRINIATSAQKIDVDNRISLRFYYRIADNILKQADIFREEKNIIDLYIMLLRFSSLVSET 67

Query: 1073 IPCHKDYKVYSQREKDVFXXXXXXXXXXXXXXKPVVQERTDKINGLATTQVDRWGHHQSN 894
            IPCH+DY+   Q +K                 KP VQ++ +++N   T QV+ WG    N
Sbjct: 68   IPCHRDYRTSQQSKKIYLKQKLLNAVKELEQLKPAVQQKINELNRKHTHQVNGWGSVNQN 127

Query: 893  YRDSSLEWPPVKKQLPKYNEIRKTPRYVGSEGT----GSLVQQDKFSLSKPMEEQYRKVN 726
                SLEWPPVKK+     +   T   + +       GS  QQ   S ++P+ EQ+RK++
Sbjct: 128  ---DSLEWPPVKKKTLTGYDAGATKAVIPAAREFVYHGSRTQQ--LSYARPVGEQFRKMS 182

Query: 725  LNIPRPKEETLSRHSILGPNGLRGQWQPPTSNIGARYPSNIDLTPIEIPSLQKPVEDNVF 546
            LN P+PKEETLSRHSILGPNGL+GQWQPP S+ G  YPSNIDL+P+EIP     +E+ + 
Sbjct: 183  LNFPQPKEETLSRHSILGPNGLQGQWQPPKSDKGVWYPSNIDLSPVEIPRFDSSLENGLA 242

Query: 545  IQKDTSS-DLERSTLESVLSLNVDGHSLLTEELCSAPTSSLDTGLMELDMQTSIIRQPSP 369
            ++ D+SS +LE  + +SVL++N +  +   EEL  +P  S +T   E  +QT +IRQPSP
Sbjct: 243  LKLDSSSSELETLSSQSVLTVNDNSQTSRVEEL--SPMISFET--TETPVQTDLIRQPSP 298

Query: 368  SPVLAEVQDLMPVTSPQVSNSVSEF-ATLPDELARSKCPLQLHISTTMMEHFLSLAKSNT 192
              VLAEVQDL+P  SPQ + + ++   + PD++ RS+ PLQLHISTTMME+F+ LAK+NT
Sbjct: 299  PAVLAEVQDLIPAMSPQATEAENKMDISSPDDIVRSESPLQLHISTTMMENFMKLAKANT 358

Query: 191  DKNLETCGILAGSLKNRKFFITALIIPKQESTSDSCQATNEEEIFDVQDKQSLFQLGWIH 12
            D+NLETCG+LAGSLKNRKF++TALIIPKQESTSDSCQ TNEEEIF+VQDK+SLF LGWIH
Sbjct: 359  DRNLETCGVLAGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKRSLFPLGWIH 418

Query: 11   THP 3
            THP
Sbjct: 419  THP 421


>ref|XP_002321479.1| predicted protein [Populus trichocarpa] gi|222868475|gb|EEF05606.1|
            predicted protein [Populus trichocarpa]
          Length = 497

 Score =  423 bits (1088), Expect = e-116
 Identities = 226/416 (54%), Positives = 294/416 (70%), Gaps = 2/416 (0%)
 Frame = -2

Query: 1244 SIAANVPRRDVDNRISLRYYYRIADNLLRQANIFREEKNVLDLFVMLMRFSSLITETIPC 1065
            +I A   R DVDNR +L  Y+RIA+N+L+QA IFR EKN++DL+VML+RFSSL++ETIPC
Sbjct: 5    NIEARTQRLDVDNRFALNIYFRIANNILKQAEIFRAEKNIIDLYVMLLRFSSLVSETIPC 64

Query: 1064 HKDYKVYSQREKDVFXXXXXXXXXXXXXXKPVVQERTDKINGLATTQVDRWGHHQSNYRD 885
            H+ Y  + Q +KD                K  VQ+R +++N   T QV+ WG++  N   
Sbjct: 65   HRGYGAFPQSKKDYLRKKLLNALGELEQLKTAVQQRINELNRKHTHQVNGWGYNSQN--- 121

Query: 884  SSLEWPPVKKQLPKYNEIRKTPRYVGSEGTGSLVQQDKFSLSKPMEEQYRKVNLNIPRPK 705
              LE PP  K++   NE         S   GS  +Q  +S  +P+E+Q+R+V+LN  RP 
Sbjct: 122  DLLEKPPYNKKILNGNE---------SLYQGSRTRQ--YSYVRPVEQQFRRVSLNFQRPN 170

Query: 704  EETLSRHSILGPNGLRGQWQPPTSNIGARYPSNIDLTPIEIPSLQKPVEDNVFIQKD-TS 528
            EETLSRHSILGPNGL  +WQPP +N G +YPS IDLTP+EIP LQ+ V+  +F++ + +S
Sbjct: 171  EETLSRHSILGPNGLNAKWQPPRTNEGVKYPSIIDLTPVEIPRLQESVKAELFVKSEHSS 230

Query: 527  SDLERSTLESVLSLNVDGHSLLTEELCSAPTSSLDTGLMELDMQTSIIRQPSPSPVLAEV 348
            S+  RS+LES+LS+  D      EE CS    S +T  +E  +  ++IRQPSP PVLAEV
Sbjct: 231  SEPGRSSLESILSVQDDNQKCRDEEPCSL--ISFET--IETPVLPAVIRQPSPPPVLAEV 286

Query: 347  QDLMPVTSPQVSNSVSEF-ATLPDELARSKCPLQLHISTTMMEHFLSLAKSNTDKNLETC 171
            QDL+P T PQVS + ++   + P++L  S+ PLQLHISTT+ME+F+ +AKSNTDKNLETC
Sbjct: 287  QDLIPATPPQVSEAENKMDISSPNDLICSEAPLQLHISTTLMENFMKMAKSNTDKNLETC 346

Query: 170  GILAGSLKNRKFFITALIIPKQESTSDSCQATNEEEIFDVQDKQSLFQLGWIHTHP 3
            G+LAGSLKNRKF++TALIIPKQESTSDSCQ TNEEEIF+VQDKQSLF LGWIHTHP
Sbjct: 347  GVLAGSLKNRKFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGWIHTHP 402


>ref|XP_003528952.1| PREDICTED: AMSH-like ubiquitin thiolesterase 1-like [Glycine max]
          Length = 519

 Score =  404 bits (1037), Expect = e-110
 Identities = 219/429 (51%), Positives = 286/429 (66%), Gaps = 5/429 (1%)
 Frame = -2

Query: 1274 REMKTSNGGFSIAANVPRRDVDNRISLRYYYRIADNLLRQANIFREEKNVLDLFVMLMRF 1095
            R   +     +IAA+  + DVDNRISLR+YYRIADN+LRQA+IFR EKN++DL+VML+RF
Sbjct: 2    RSSSSDRNRINIAASAQKVDVDNRISLRFYYRIADNILRQADIFRAEKNIIDLYVMLLRF 61

Query: 1094 SSLITETIPCHKDYKVYSQREKDVFXXXXXXXXXXXXXXKPVVQERTDKINGLATTQVDR 915
            SSL++ETIP H+DY+    R+K+                KPVVQ++ +++N     Q + 
Sbjct: 62   SSLVSETIPRHRDYRSSPPRQKESLKKKLLISLNELENLKPVVQQKINELNSKLAYQQNG 121

Query: 914  WGHHQSNYRDSSLEWPPVKKQLPKYNEIRKTPRYVGSEGTGSLVQQDKFSLSKPMEEQYR 735
             G   SN   +SL++ PVKKQ      + K  R    E      +   FS  +P+EE  R
Sbjct: 122  QGKFSSN---NSLDFSPVKKQTSASYGLIKAVRPTAGEFVYQGSRSQPFSYVRPVEEHAR 178

Query: 734  KVNLNIPRPKEETLSRHSILGPNGLRGQWQPPTSNIGARYPSNIDLTPIEIPSLQKPVED 555
            +++L +P PKEETLSRHSILGPNGL+GQW+PP  + G +YPSNIDL+P+E+PSLQ  +ED
Sbjct: 179  RLSLTLPPPKEETLSRHSILGPNGLKGQWRPPIIDKGIKYPSNIDLSPVELPSLQHSLED 238

Query: 554  NVFIQKDTS-SDLERSTLESVLSLNVD--GHSLLTEELCSAPTSSLDTGLMELDMQTSII 384
                +KD S ++  +S L+S+L+ + D   H     +    P S +     E   +  +I
Sbjct: 239  ESLKKKDNSIAEHHKSELDSILTQSEDCQPHPQPQPQHDQEPPSLISFETTETSARIEVI 298

Query: 383  RQPSPSPVLAEVQDLMPVTSPQVSNSVSEFATLP--DELARSKCPLQLHISTTMMEHFLS 210
            RQPSP PVLAEVQDL+P  SP V+ +  +   +P  D     + P+QLHIST +ME F+ 
Sbjct: 299  RQPSPPPVLAEVQDLVPAVSPCVNEAGCK-TEIPSSDSSVHVEAPMQLHISTALMESFMK 357

Query: 209  LAKSNTDKNLETCGILAGSLKNRKFFITALIIPKQESTSDSCQATNEEEIFDVQDKQSLF 30
            LAKSNT KNLETCG+LAG LKNRKF+ITALIIPKQESTSDSCQ TNEEEIF+VQDK+SLF
Sbjct: 358  LAKSNTKKNLETCGVLAGLLKNRKFYITALIIPKQESTSDSCQTTNEEEIFEVQDKRSLF 417

Query: 29   QLGWIHTHP 3
             LGWIHTHP
Sbjct: 418  PLGWIHTHP 426


>ref|XP_003525234.1| PREDICTED: AMSH-like ubiquitin thiolesterase 1-like [Glycine max]
          Length = 509

 Score =  401 bits (1031), Expect = e-109
 Identities = 223/427 (52%), Positives = 289/427 (67%), Gaps = 8/427 (1%)
 Frame = -2

Query: 1259 SNGGFSIAANVPRRDVDNRISLRYYYRIADNLLRQANIFREEKNVLDLFVMLMRFSSLIT 1080
            S+   +IAA+  + DVDNRI+LR+YYRIADN+L+QA+IFR E N++DL++ML+RFSSL++
Sbjct: 3    SSETINIAASTQKLDVDNRIALRFYYRIADNILKQADIFRAETNIVDLYIMLLRFSSLVS 62

Query: 1079 ETIPCHKDYKVYSQREKDVFXXXXXXXXXXXXXXKPVVQERTDKINGLATTQVDRWGH-H 903
            ETIP H+DY+   Q +K+                KP VQ++ ++ N     Q + W   H
Sbjct: 63   ETIPRHRDYRSSPQGKKEALRKKLLHSMNELEKLKPKVQQKINEFNSRRAYQPNGWEKCH 122

Query: 902  QSNYRDSSLEWPPVKKQ-LPKYNEIRKTPRYVGSEGTGSLVQQ----DKFSLSKPMEEQY 738
             +N+ D S    P KKQ L  YN+ +          TG  V Q     +FS  +P+EE  
Sbjct: 123  SNNFMDFS----PAKKQTLTSYNKKKAV-----IPTTGEFVYQGSRGQQFSSVRPVEENM 173

Query: 737  RKVNLNIPRPKEETLSRHSILGPNGLRGQWQPPTSNIGARYPSNIDLTPIEIPSLQKPVE 558
            R+++L++ RPKEETLSRHSILGPNGL+GQW+PP S+ G RYP+ IDL+P+EIPSLQ+P+ 
Sbjct: 174  RRLSLSLLRPKEETLSRHSILGPNGLKGQWRPPASDKGVRYPTIIDLSPVEIPSLQQPLV 233

Query: 557  DNVFIQKDTS-SDLERSTLESVLSLNVDGHSLLTEELCSAPTSSLDTGLMELDMQTSIIR 381
            D    +KD S S+  +S LES+L+ + D  +   +E   AP S +     E+  Q  + R
Sbjct: 234  DGSLTKKDNSISEQHKSDLESILTQSDDCKAKHADE---AP-SLISFEATEIPAQIEVTR 289

Query: 380  QPSPSPVLAEVQDLMPVTSPQV-SNSVSEFATLPDELARSKCPLQLHISTTMMEHFLSLA 204
            QPSP PVLAEVQDL+P   P V          + D + R++ PLQLHIST+MME F+ LA
Sbjct: 290  QPSPPPVLAEVQDLVPAMLPHVIEEGCKTEIPMSDSIVRAESPLQLHISTSMMESFMKLA 349

Query: 203  KSNTDKNLETCGILAGSLKNRKFFITALIIPKQESTSDSCQATNEEEIFDVQDKQSLFQL 24
            KSNTDKNLETCGILAG LKNRKF+IT LIIPKQE+TS SCQATNEEEIF+VQDKQSLF L
Sbjct: 350  KSNTDKNLETCGILAGLLKNRKFYITTLIIPKQEATSSSCQATNEEEIFEVQDKQSLFPL 409

Query: 23   GWIHTHP 3
            GWIHTHP
Sbjct: 410  GWIHTHP 416


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