BLASTX nr result

ID: Coptis24_contig00017286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017286
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304140.1| predicted protein [Populus trichocarpa] gi|2...   152   1e-35
ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248...   148   6e-35
ref|XP_002521336.1| protein with unknown function [Ricinus commu...   144   9e-35
gb|ADL36631.1| C2H2L domain class transcription factor [Malus x ...   146   3e-33
ref|XP_004167884.1| PREDICTED: uncharacterized protein LOC101227...   143   4e-33

>ref|XP_002304140.1| predicted protein [Populus trichocarpa] gi|222841572|gb|EEE79119.1|
           predicted protein [Populus trichocarpa]
          Length = 655

 Score =  152 bits (384), Expect(2) = 1e-35
 Identities = 73/96 (76%), Positives = 88/96 (91%), Gaps = 2/96 (2%)
 Frame = -2

Query: 644 QDLVSQVNSQGKLEPEVEDLLLEIADEFIDSVTTVACSLAKHRKSSTLETKDVLLHLERN 465
           QDLVSQV+S GKL+PEVE+L LEIAD+FIDSVT  ACSLAKHRKSSTLE+KD+LLHLE+N
Sbjct: 475 QDLVSQVDSHGKLDPEVEELFLEIADDFIDSVTAFACSLAKHRKSSTLESKDILLHLEKN 534

Query: 464 WQLSIPGFTSDE--HKKKPVPTDIHKKRLEMIRALM 363
           W L+IPGF+S+E  H+ KP+P+D+HKKRL+MIRALM
Sbjct: 535 WHLTIPGFSSEERKHQSKPLPSDLHKKRLDMIRALM 570



 Score = 23.1 bits (48), Expect(2) = 1e-35
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = -3

Query: 328 ASHSGINTDNSKDTIRQGLSNSIGGNH 248
           +S S  N  N K+ IRQG  N    NH
Sbjct: 572 SSQSEENNINPKEMIRQGHGNPAVTNH 598


>ref|XP_002264851.2| PREDICTED: uncharacterized protein LOC100248501 [Vitis vinifera]
           gi|297743015|emb|CBI35882.3| unnamed protein product
           [Vitis vinifera]
          Length = 587

 Score =  148 bits (373), Expect(2) = 6e-35
 Identities = 72/96 (75%), Positives = 87/96 (90%), Gaps = 2/96 (2%)
 Frame = -2

Query: 644 QDLVSQVNSQGKLEPEVEDLLLEIADEFIDSVTTVACSLAKHRKSSTLETKDVLLHLERN 465
           QDLVSQV+SQGKL+PEVEDLLLEIAD+FIDSVTT ACSLAKHRKSSTLE+KD+LLHLE+N
Sbjct: 435 QDLVSQVDSQGKLDPEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDLLLHLEKN 494

Query: 464 WQLSIPGFTSDEHKK--KPVPTDIHKKRLEMIRALM 363
           W L IPG++S+E K   KP  +++HKKR++M+RALM
Sbjct: 495 WDLKIPGYSSEEQKNQTKPSSSELHKKRVDMVRALM 530



 Score = 25.4 bits (54), Expect(2) = 6e-35
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
 Frame = -3

Query: 328 ASHSGINTDNSKDTIRQGLSNS-IGGN---HXXXXXXXXXXXXXXVGPSMLQQVPRF 170
           +SHS  N  N+K+ +RQGL N+ +G N                      MLQQ+ RF
Sbjct: 532 SSHSETNA-NAKEMMRQGLGNNPVGANPMMRPSPSPSAEPLVSQSTSSQMLQQITRF 587


>ref|XP_002521336.1| protein with unknown function [Ricinus communis]
           gi|223539414|gb|EEF41004.1| protein with unknown
           function [Ricinus communis]
          Length = 523

 Score =  144 bits (362), Expect(2) = 9e-35
 Identities = 69/95 (72%), Positives = 88/95 (92%), Gaps = 2/95 (2%)
 Frame = -2

Query: 644 QDLVSQVNSQGKLEPEVEDLLLEIADEFIDSVTTVACSLAKHRKSSTLETKDVLLHLERN 465
           QDLVSQV+SQGK++PEVE+LLLEIAD+FID+VT  ACSLAKHRKSSTLE+KD+LLHLE+N
Sbjct: 374 QDLVSQVDSQGKVDPEVEELLLEIADDFIDNVTMFACSLAKHRKSSTLESKDLLLHLEKN 433

Query: 464 WQLSIPGFTSDEH--KKKPVPTDIHKKRLEMIRAL 366
           W L+IPGF+++E   ++KP+ +D+HKKRL+MIRAL
Sbjct: 434 WHLTIPGFSTEERNLQRKPLSSDLHKKRLDMIRAL 468



 Score = 28.9 bits (63), Expect(2) = 9e-35
 Identities = 20/53 (37%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -3

Query: 325 SHSGINTDNSKDTIRQGLSNSIGGNHXXXXXXXXXXXXXXVGPS-MLQQVPRF 170
           SHS  N +N ++ IRQGL N +  NH                 S MLQQ+ RF
Sbjct: 472 SHSETN-NNPREMIRQGLGNPVVTNHLIRSSPSSEQLVSQSTSSQMLQQITRF 523


>gb|ADL36631.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 630

 Score =  146 bits (369), Expect = 3e-33
 Identities = 72/96 (75%), Positives = 87/96 (90%), Gaps = 2/96 (2%)
 Frame = -2

Query: 644 QDLVSQVNSQGKLEPEVEDLLLEIADEFIDSVTTVACSLAKHRKSSTLETKDVLLHLERN 465
           QDLVSQV+SQG+L+PEVEDLLLEIAD+FIDSVTT AC+LAKHRKSSTLE+KDVLLHLE+N
Sbjct: 481 QDLVSQVDSQGRLDPEVEDLLLEIADDFIDSVTTYACNLAKHRKSSTLESKDVLLHLEKN 540

Query: 464 WQLSIPGFTSDEHK--KKPVPTDIHKKRLEMIRALM 363
           W L+IPGF+S+E K   K + +D+HKKRL++IR LM
Sbjct: 541 WHLTIPGFSSEERKCQNKSLSSDLHKKRLDVIRTLM 576


>ref|XP_004167884.1| PREDICTED: uncharacterized protein LOC101227692 [Cucumis sativus]
          Length = 668

 Score =  143 bits (360), Expect(2) = 4e-33
 Identities = 70/96 (72%), Positives = 84/96 (87%), Gaps = 3/96 (3%)
 Frame = -2

Query: 644 QDLVSQVNSQGKLEPEVEDLLLEIADEFIDSVTTVACSLAKHRKSSTLETKDVLLHLERN 465
           QDLVSQV+  GKLEPEVEDLLLEIAD+FIDSVTT +C+LAKHRKSSTLE+KD+LLHLE+N
Sbjct: 517 QDLVSQVDPHGKLEPEVEDLLLEIADDFIDSVTTFSCNLAKHRKSSTLESKDLLLHLEKN 576

Query: 464 WQLSIPGFTSDE---HKKKPVPTDIHKKRLEMIRAL 366
           WQL++PG++SDE   H K    +D+HKKRL+MIR L
Sbjct: 577 WQLNVPGYSSDEWKNHNKNLSSSDVHKKRLDMIRIL 612



 Score = 24.3 bits (51), Expect(2) = 4e-33
 Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 310 NTDNSKDTIRQGLSNSIGGNH-XXXXXXXXXXXXXXVGPSMLQQVPRF 170
           N ++ K+ +RQG+  SIG N                 G  +LQQ+ RF
Sbjct: 621 NVNSPKEMVRQGVGMSIGPNTLTRPSPSSEQLLSQTAGSQLLQQMMRF 668


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