BLASTX nr result

ID: Coptis24_contig00017283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017283
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632851.1| PREDICTED: uncharacterized protein LOC100853...   111   1e-22
emb|CBI35941.3| unnamed protein product [Vitis vinifera]              111   1e-22
ref|XP_002527413.1| conserved hypothetical protein [Ricinus comm...   110   2e-22
ref|XP_002329022.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
gb|AFK48658.1| unknown [Lotus japonicus]                               98   2e-18

>ref|XP_003632851.1| PREDICTED: uncharacterized protein LOC100853480 [Vitis vinifera]
          Length = 181

 Score =  111 bits (277), Expect = 1e-22
 Identities = 62/114 (54%), Positives = 76/114 (66%), Gaps = 6/114 (5%)
 Frame = -3

Query: 670 VNLGIGAYLFLRTNKKEKGAEDGEVAVAVPSTPVANXXXXXXXXXXXXXXXXXXXXXXP- 494
           VNL +GAY+F+RT KK+ G E+ EVA AV +TPV+                       P 
Sbjct: 68  VNLAVGAYIFMRTRKKDTGIEE-EVAAAVVTTPVSTTAASTAPAPVIEKPIPSPPIMAPV 126

Query: 493 -----IPEDKQREIFKWMLEEKRKVKPSSPEEKKRLDEEKAILKQFIRGKSIPS 347
                IPE++QREIFKW+LEEKRKVKP++PEEKKR+DEEKAILKQFIR  SIP+
Sbjct: 127 KLPDPIPENQQREIFKWLLEEKRKVKPNNPEEKKRIDEEKAILKQFIRATSIPT 180


>emb|CBI35941.3| unnamed protein product [Vitis vinifera]
          Length = 198

 Score =  111 bits (277), Expect = 1e-22
 Identities = 62/114 (54%), Positives = 76/114 (66%), Gaps = 6/114 (5%)
 Frame = -3

Query: 670 VNLGIGAYLFLRTNKKEKGAEDGEVAVAVPSTPVANXXXXXXXXXXXXXXXXXXXXXXP- 494
           VNL +GAY+F+RT KK+ G E+ EVA AV +TPV+                       P 
Sbjct: 85  VNLAVGAYIFMRTRKKDTGIEE-EVAAAVVTTPVSTTAASTAPAPVIEKPIPSPPIMAPV 143

Query: 493 -----IPEDKQREIFKWMLEEKRKVKPSSPEEKKRLDEEKAILKQFIRGKSIPS 347
                IPE++QREIFKW+LEEKRKVKP++PEEKKR+DEEKAILKQFIR  SIP+
Sbjct: 144 KLPDPIPENQQREIFKWLLEEKRKVKPNNPEEKKRIDEEKAILKQFIRATSIPT 197


>ref|XP_002527413.1| conserved hypothetical protein [Ricinus communis]
           gi|223533223|gb|EEF34979.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score =  110 bits (275), Expect = 2e-22
 Identities = 61/113 (53%), Positives = 74/113 (65%), Gaps = 4/113 (3%)
 Frame = -3

Query: 670 VNLGIGAYLFLRTNKKEKGAEDGEVAVAVPSTPVANXXXXXXXXXXXXXXXXXXXXXXP- 494
           VNL +GAYLF+RT KKE G E+ E A  VP TPV++                        
Sbjct: 80  VNLTVGAYLFMRTKKKETGLEE-EAAKNVPPTPVSSTSTASAAVTEKPISLPAVPEPVKL 138

Query: 493 ---IPEDKQREIFKWMLEEKRKVKPSSPEEKKRLDEEKAILKQFIRGKSIPSL 344
              I E++QRE+++WMLEEKRKVKP +PEEKKR+DEEKAILKQFIR KSIPS+
Sbjct: 139 REPISENQQRELYRWMLEEKRKVKPKNPEEKKRIDEEKAILKQFIRAKSIPSI 191


>ref|XP_002329022.1| predicted protein [Populus trichocarpa] gi|222839693|gb|EEE78016.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score =  103 bits (258), Expect = 2e-20
 Identities = 56/109 (51%), Positives = 71/109 (65%)
 Frame = -3

Query: 670 VNLGIGAYLFLRTNKKEKGAEDGEVAVAVPSTPVANXXXXXXXXXXXXXXXXXXXXXXPI 491
           VNL +GAYLF+RT KK+   E+ EV+  +PS+  +                       PI
Sbjct: 82  VNLSVGAYLFMRTKKKDTVQEE-EVSSKIPSSTPSTTAPVSETPIPSPTISEVVKLCEPI 140

Query: 490 PEDKQREIFKWMLEEKRKVKPSSPEEKKRLDEEKAILKQFIRGKSIPSL 344
            ED+QRE+FKW+LEEKRKVKP   EE+KR+D+EKAILKQFIR KSIPS+
Sbjct: 141 REDQQRELFKWILEEKRKVKPKDSEERKRIDDEKAILKQFIRAKSIPSI 189


>gb|AFK48658.1| unknown [Lotus japonicus]
          Length = 173

 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 52/109 (47%), Positives = 67/109 (61%)
 Frame = -3

Query: 670 VNLGIGAYLFLRTNKKEKGAEDGEVAVAVPSTPVANXXXXXXXXXXXXXXXXXXXXXXPI 491
           VNLG+GAYLF+RT KK+ G E+ + +       VA+                       I
Sbjct: 68  VNLGVGAYLFVRTKKKDIGEEEQDASPVPVKETVAHVAETRVSPAPIASPVIEREP---I 124

Query: 490 PEDKQREIFKWMLEEKRKVKPSSPEEKKRLDEEKAILKQFIRGKSIPSL 344
           P D+QRE+FKW+LEEKRKVKP   EEK+++DEEKA+LK  IR KSIPS+
Sbjct: 125 PVDQQRELFKWILEEKRKVKPKDAEEKRKIDEEKALLKNLIRSKSIPSI 173


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