BLASTX nr result

ID: Coptis24_contig00017273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017273
         (457 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-29
emb|CBI27491.3| unnamed protein product [Vitis vinifera]              116   5e-28
ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243...   116   5e-28
tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea m...   110   2e-27
emb|CAN78970.1| hypothetical protein VITISV_037587 [Vitis vinifera]   114   3e-27

>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
           predicted protein [Populus trichocarpa]
          Length = 1950

 Score =  119 bits (298), Expect(2) = 3e-29
 Identities = 61/122 (50%), Positives = 74/122 (60%)
 Frame = +1

Query: 91  DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
           D   V   S D  Q  E D++IISTVR N  G++G +SD    + +LTRARHCLWILGN 
Sbjct: 606 DGFSVKVSSIDGFQGGEEDIVIISTVRSNTGGAIGFMSDPRRINVALTRARHCLWILGNE 665

Query: 271 STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
            TL  S SIW+ LV DA+ER C FHA EDKDLA  IL+VK+           +S LF   
Sbjct: 666 RTLSNSESIWEKLVHDAKERSCFFHADEDKDLAKAILEVKKEFDQLDDLIKGDSALFRSA 725

Query: 451 KW 456
           +W
Sbjct: 726 RW 727



 Score = 33.9 bits (76), Expect(2) = 3e-29
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = +2

Query: 2   SFIDFADGKEISNDHGEDWKNIVEAAVVIKILTKLFR 112
           +FI+   G+E  +D G   KN+VE A+V+K+L  L++
Sbjct: 536 TFINVFGGREELDDVGHSRKNMVEVAIVLKLLRSLYK 572


>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
          Length = 6100

 Score =  116 bits (291), Expect(2) = 5e-28
 Identities = 58/122 (47%), Positives = 78/122 (63%)
 Frame = +1

Query: 91   DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
            D+  V  ++ D  Q+ E D+II+STVR N  GS+G LS+   T+ +LTRARHCLWILGN 
Sbjct: 4161 DNFAVKVKTVDGFQAGEEDIIIMSTVRANSHGSIGFLSNPQRTNVALTRARHCLWILGNE 4220

Query: 271  STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
             TL KS S+W+DLV DA+ R   F+A EDKD+A  IL++K             S+LF + 
Sbjct: 4221 RTLAKSESVWEDLVCDAKRRKRFFNADEDKDMAKAILEIKTEFDQLDRLLDGSSILFKNA 4280

Query: 451  KW 456
            +W
Sbjct: 4281 RW 4282



 Score = 32.7 bits (73), Expect(2) = 5e-28
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = +2

Query: 2    SFIDFADGKEISNDHGEDWKNIVEAAVVIKILTKLFR 112
            SFI+   GKE  +D G+  KN++E A+VIKI+  L++
Sbjct: 4090 SFINVR-GKEEHDDVGKSRKNMIEVAIVIKIVGNLYK 4125



 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/122 (45%), Positives = 78/122 (63%)
 Frame = +1

Query: 91  DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
           D   V  ++ D  Q  E D+I+ISTVR N  GSVG+++D  +T+ +LTRARHCLWILG+ 
Sbjct: 116 DMFSVKVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHCLWILGSE 175

Query: 271 STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
            TLV S ++WKD+V DA++R C+ +A ED DLA  +  VK           ++S LFN  
Sbjct: 176 RTLVMSETVWKDIVHDAKDRHCLLNADEDCDLANTMFKVKAELHELDDLLNRDSSLFNSA 235

Query: 451 KW 456
           +W
Sbjct: 236 RW 237



 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/122 (45%), Positives = 77/122 (63%)
 Frame = +1

Query: 91   DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
            D   V  ++ D  Q  E D+I+ISTVR N  GSVG+++D  +T+ +LTRARH LWILG+ 
Sbjct: 2053 DRFSVKVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHGLWILGSE 2112

Query: 271  STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
             TLV S ++WKD+V DA++R C+ +A ED DLA  I  VK           ++S LFN  
Sbjct: 2113 RTLVMSETVWKDIVHDAKDRHCLLNADEDCDLANTIFKVKTELDELDDLLNKDSSLFNSA 2172

Query: 451  KW 456
            +W
Sbjct: 2173 RW 2174


>ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
          Length = 2788

 Score =  116 bits (291), Expect(2) = 5e-28
 Identities = 58/122 (47%), Positives = 78/122 (63%)
 Frame = +1

Query: 91   DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
            D+  V  ++ D  Q+ E D+II+STVR N  GS+G LS+   T+ +LTRARHCLWILGN 
Sbjct: 778  DNFAVKVKTVDGFQAGEEDIIIMSTVRANSHGSIGFLSNPQRTNVALTRARHCLWILGNE 837

Query: 271  STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
             TL KS S+W+DLV DA+ R   F+A EDKD+A  IL++K             S+LF + 
Sbjct: 838  RTLAKSESVWEDLVCDAKRRKRFFNADEDKDMAKAILEIKTEFDQLDRLLDGSSILFKNA 897

Query: 451  KW 456
            +W
Sbjct: 898  RW 899



 Score = 32.7 bits (73), Expect(2) = 5e-28
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = +2

Query: 2   SFIDFADGKEISNDHGEDWKNIVEAAVVIKILTKLFR 112
           SFI+   GKE  +D G+  KN++E A+VIKI+  L++
Sbjct: 707 SFINVR-GKEEHDDVGKSRKNMIEVAIVIKIVGNLYK 742


>tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea mays]
          Length = 2606

 Score =  110 bits (275), Expect(2) = 2e-27
 Identities = 57/122 (46%), Positives = 76/122 (62%)
 Frame = +1

Query: 91   DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
            D+  V  +S D  Q  E D+II+STVR NE G+VG L+D   T+ +LTRARHCLWILGN 
Sbjct: 702  DNFHVRVKSIDGFQGEEDDIIILSTVRSNERGNVGFLADIQRTNVALTRARHCLWILGNA 761

Query: 271  STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
            +TL KS ++W DLV DA+ R CI +A  D +L  +IL VK             S +F++ 
Sbjct: 762  NTLYKSGTVWTDLVSDAQRRKCISNATTDPELCKLILHVKNELDELDDLLCSSSAVFSNT 821

Query: 451  KW 456
            +W
Sbjct: 822  RW 823



 Score = 37.0 bits (84), Expect(2) = 2e-27
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +2

Query: 2   SFIDFADGKEISNDHGEDWKNIVEAAVVIKILTKLFR 112
           +FI+  DG+E     G  W+N+VE AVV+ ++  +F+
Sbjct: 630 AFINITDGREQKEGAGNSWQNLVEVAVVMHLIRTIFK 666


>emb|CAN78970.1| hypothetical protein VITISV_037587 [Vitis vinifera]
          Length = 2676

 Score =  114 bits (284), Expect(2) = 3e-27
 Identities = 58/122 (47%), Positives = 76/122 (62%)
 Frame = +1

Query: 91   DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
            D+  V  ++ D  Q+ E D+II STVR N  GS+G LS+   T+ +LTRARHCLWILGN 
Sbjct: 781  DNFAVKVKTVDGFQAGEEDIIIXSTVRANSHGSIGFLSNPQRTNVALTRARHCLWILGNE 840

Query: 271  STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
             TL KS S W+DLV DA+ R   F+A EDKD+A  IL++K             S+LF + 
Sbjct: 841  RTLAKSESXWEDLVCDAKXRKRFFNADEDKDMAKAILEIKXEFDQLDRLLDGSSILFKNA 900

Query: 451  KW 456
            +W
Sbjct: 901  RW 902



 Score = 32.7 bits (73), Expect(2) = 3e-27
 Identities = 17/37 (45%), Positives = 26/37 (70%)
 Frame = +2

Query: 2   SFIDFADGKEISNDHGEDWKNIVEAAVVIKILTKLFR 112
           SFI+   GKE  +D G+  KN++E A+VIKI+  L++
Sbjct: 710 SFINVR-GKEEHDDVGKSRKNMIEVAIVIKIVGNLYK 745


Top