BLASTX nr result
ID: Coptis24_contig00017273
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00017273
(457 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2... 119 3e-29
emb|CBI27491.3| unnamed protein product [Vitis vinifera] 116 5e-28
ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243... 116 5e-28
tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea m... 110 2e-27
emb|CAN78970.1| hypothetical protein VITISV_037587 [Vitis vinifera] 114 3e-27
>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
predicted protein [Populus trichocarpa]
Length = 1950
Score = 119 bits (298), Expect(2) = 3e-29
Identities = 61/122 (50%), Positives = 74/122 (60%)
Frame = +1
Query: 91 DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
D V S D Q E D++IISTVR N G++G +SD + +LTRARHCLWILGN
Sbjct: 606 DGFSVKVSSIDGFQGGEEDIVIISTVRSNTGGAIGFMSDPRRINVALTRARHCLWILGNE 665
Query: 271 STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
TL S SIW+ LV DA+ER C FHA EDKDLA IL+VK+ +S LF
Sbjct: 666 RTLSNSESIWEKLVHDAKERSCFFHADEDKDLAKAILEVKKEFDQLDDLIKGDSALFRSA 725
Query: 451 KW 456
+W
Sbjct: 726 RW 727
Score = 33.9 bits (76), Expect(2) = 3e-29
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 2 SFIDFADGKEISNDHGEDWKNIVEAAVVIKILTKLFR 112
+FI+ G+E +D G KN+VE A+V+K+L L++
Sbjct: 536 TFINVFGGREELDDVGHSRKNMVEVAIVLKLLRSLYK 572
>emb|CBI27491.3| unnamed protein product [Vitis vinifera]
Length = 6100
Score = 116 bits (291), Expect(2) = 5e-28
Identities = 58/122 (47%), Positives = 78/122 (63%)
Frame = +1
Query: 91 DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
D+ V ++ D Q+ E D+II+STVR N GS+G LS+ T+ +LTRARHCLWILGN
Sbjct: 4161 DNFAVKVKTVDGFQAGEEDIIIMSTVRANSHGSIGFLSNPQRTNVALTRARHCLWILGNE 4220
Query: 271 STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
TL KS S+W+DLV DA+ R F+A EDKD+A IL++K S+LF +
Sbjct: 4221 RTLAKSESVWEDLVCDAKRRKRFFNADEDKDMAKAILEIKTEFDQLDRLLDGSSILFKNA 4280
Query: 451 KW 456
+W
Sbjct: 4281 RW 4282
Score = 32.7 bits (73), Expect(2) = 5e-28
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 2 SFIDFADGKEISNDHGEDWKNIVEAAVVIKILTKLFR 112
SFI+ GKE +D G+ KN++E A+VIKI+ L++
Sbjct: 4090 SFINVR-GKEEHDDVGKSRKNMIEVAIVIKIVGNLYK 4125
Score = 112 bits (280), Expect = 3e-23
Identities = 56/122 (45%), Positives = 78/122 (63%)
Frame = +1
Query: 91 DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
D V ++ D Q E D+I+ISTVR N GSVG+++D +T+ +LTRARHCLWILG+
Sbjct: 116 DMFSVKVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHCLWILGSE 175
Query: 271 STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
TLV S ++WKD+V DA++R C+ +A ED DLA + VK ++S LFN
Sbjct: 176 RTLVMSETVWKDIVHDAKDRHCLLNADEDCDLANTMFKVKAELHELDDLLNRDSSLFNSA 235
Query: 451 KW 456
+W
Sbjct: 236 RW 237
Score = 108 bits (271), Expect = 3e-22
Identities = 56/122 (45%), Positives = 77/122 (63%)
Frame = +1
Query: 91 DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
D V ++ D Q E D+I+ISTVR N GSVG+++D +T+ +LTRARH LWILG+
Sbjct: 2053 DRFSVKVQTIDGFQGGEEDIILISTVRANNFGSVGVMADVKITNVALTRARHGLWILGSE 2112
Query: 271 STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
TLV S ++WKD+V DA++R C+ +A ED DLA I VK ++S LFN
Sbjct: 2113 RTLVMSETVWKDIVHDAKDRHCLLNADEDCDLANTIFKVKTELDELDDLLNKDSSLFNSA 2172
Query: 451 KW 456
+W
Sbjct: 2173 RW 2174
>ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
Length = 2788
Score = 116 bits (291), Expect(2) = 5e-28
Identities = 58/122 (47%), Positives = 78/122 (63%)
Frame = +1
Query: 91 DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
D+ V ++ D Q+ E D+II+STVR N GS+G LS+ T+ +LTRARHCLWILGN
Sbjct: 778 DNFAVKVKTVDGFQAGEEDIIIMSTVRANSHGSIGFLSNPQRTNVALTRARHCLWILGNE 837
Query: 271 STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
TL KS S+W+DLV DA+ R F+A EDKD+A IL++K S+LF +
Sbjct: 838 RTLAKSESVWEDLVCDAKRRKRFFNADEDKDMAKAILEIKTEFDQLDRLLDGSSILFKNA 897
Query: 451 KW 456
+W
Sbjct: 898 RW 899
Score = 32.7 bits (73), Expect(2) = 5e-28
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 2 SFIDFADGKEISNDHGEDWKNIVEAAVVIKILTKLFR 112
SFI+ GKE +D G+ KN++E A+VIKI+ L++
Sbjct: 707 SFINVR-GKEEHDDVGKSRKNMIEVAIVIKIVGNLYK 742
>tpg|DAA36205.1| TPA: hypothetical protein ZEAMMB73_541257 [Zea mays]
Length = 2606
Score = 110 bits (275), Expect(2) = 2e-27
Identities = 57/122 (46%), Positives = 76/122 (62%)
Frame = +1
Query: 91 DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
D+ V +S D Q E D+II+STVR NE G+VG L+D T+ +LTRARHCLWILGN
Sbjct: 702 DNFHVRVKSIDGFQGEEDDIIILSTVRSNERGNVGFLADIQRTNVALTRARHCLWILGNA 761
Query: 271 STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
+TL KS ++W DLV DA+ R CI +A D +L +IL VK S +F++
Sbjct: 762 NTLYKSGTVWTDLVSDAQRRKCISNATTDPELCKLILHVKNELDELDDLLCSSSAVFSNT 821
Query: 451 KW 456
+W
Sbjct: 822 RW 823
Score = 37.0 bits (84), Expect(2) = 2e-27
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +2
Query: 2 SFIDFADGKEISNDHGEDWKNIVEAAVVIKILTKLFR 112
+FI+ DG+E G W+N+VE AVV+ ++ +F+
Sbjct: 630 AFINITDGREQKEGAGNSWQNLVEVAVVMHLIRTIFK 666
>emb|CAN78970.1| hypothetical protein VITISV_037587 [Vitis vinifera]
Length = 2676
Score = 114 bits (284), Expect(2) = 3e-27
Identities = 58/122 (47%), Positives = 76/122 (62%)
Frame = +1
Query: 91 DSDEVISRSSDEIQSCEVDVIIISTVRCNESGSVGLLSDRYLTSASLTRARHCLWILGNR 270
D+ V ++ D Q+ E D+II STVR N GS+G LS+ T+ +LTRARHCLWILGN
Sbjct: 781 DNFAVKVKTVDGFQAGEEDIIIXSTVRANSHGSIGFLSNPQRTNVALTRARHCLWILGNE 840
Query: 271 STLVKSHSIWKDLVVDAEERGCIFHAGEDKDLAAVILDVKRXXXXXXXXXXQESVLFNHK 450
TL KS S W+DLV DA+ R F+A EDKD+A IL++K S+LF +
Sbjct: 841 RTLAKSESXWEDLVCDAKXRKRFFNADEDKDMAKAILEIKXEFDQLDRLLDGSSILFKNA 900
Query: 451 KW 456
+W
Sbjct: 901 RW 902
Score = 32.7 bits (73), Expect(2) = 3e-27
Identities = 17/37 (45%), Positives = 26/37 (70%)
Frame = +2
Query: 2 SFIDFADGKEISNDHGEDWKNIVEAAVVIKILTKLFR 112
SFI+ GKE +D G+ KN++E A+VIKI+ L++
Sbjct: 710 SFINVR-GKEEHDDVGKSRKNMIEVAIVIKIVGNLYK 745