BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017260
         (1610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-li...   583   e-164
ref|XP_002319912.1| predicted protein [Populus trichocarpa] gi|3...   573   e-161
ref|NP_568196.1| lipoyl synthase [Arabidopsis thaliana] gi|30819...   572   e-160
gb|AAM62684.1| lipoic acid synthase-like protein [Arabidopsis th...   572   e-160
ref|XP_002270080.1| PREDICTED: lipoyl synthase, chloroplastic [V...   571   e-160

>ref|XP_003555873.1| PREDICTED: lipoyl synthase, chloroplastic-like [Glycine max]
          Length = 364

 Score =  583 bits (1502), Expect = e-164
 Identities = 297/353 (84%), Positives = 313/353 (88%), Gaps = 6/353 (1%)
 Frame = +3

Query: 60   SLTKPITIPTHSKPKSLIHYYSRPT-RI-----NIVGAEAVDYTYPGGGMGVHTGRDPNV 221
            SL  P +I T S P    H ++ P+ RI     ++   + V   YPGG +G HTGRDPN 
Sbjct: 5    SLYTPPSI-TFSTPSPKRHRFAPPSWRIRCDASSVSVEQKVVGPYPGG-LGPHTGRDPNA 62

Query: 222  KKPAWLRQKAPQGERFSEVKESLSKLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLG 401
            KKP WLRQKAPQGERF E+KESLS LKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLG
Sbjct: 63   KKPEWLRQKAPQGERFQEIKESLSHLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLG 122

Query: 402  DTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFA 581
            DTCTRGCRFCAVKTSRNP P DPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFA
Sbjct: 123  DTCTRGCRFCAVKTSRNPPPADPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFA 182

Query: 582  CTVEAMKSLSPDIMVECLTSDFRGDLNAVTSLVHSGLDVFAHNVETVKRLQRIVRDPRAG 761
             TV+AMK+L P+IMVECLTSDFRGDL AV +LVHSGLDVFAHN+ETVKRLQRIVRDPRAG
Sbjct: 183  QTVKAMKNLKPEIMVECLTSDFRGDLKAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAG 242

Query: 762  YEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADLRAIDVDILTLGQYLQPTP 941
            YEQSLSVLKHAK  KEGMITKTSIMLGLGESD+EVKEAMADLRAIDVDILTLGQYLQPTP
Sbjct: 243  YEQSLSVLKHAKHSKEGMITKTSIMLGLGESDDEVKEAMADLRAIDVDILTLGQYLQPTP 302

Query: 942  LHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAGELFVKTMVREK 1100
            LHLTVKEYVTPEKF FWK+YGESIGFRYVASGPLVRSSYRAGELFVKTMVREK
Sbjct: 303  LHLTVKEYVTPEKFDFWKEYGESIGFRYVASGPLVRSSYRAGELFVKTMVREK 355


>ref|XP_002319912.1| predicted protein [Populus trichocarpa]
            gi|308191445|sp|B9I666.1|LISC1_POPTR RecName: Full=Lipoyl
            synthase 1, chloroplastic; AltName: Full=Lipoate synthase
            1; Short=LS 1; Short=Lip-syn 1; AltName: Full=Lipoate
            synthase, plastidial 1; Short=LIP1p 1; AltName:
            Full=Lipoic acid synthase 1; Flags: Precursor
            gi|222858288|gb|EEE95835.1| predicted protein [Populus
            trichocarpa]
          Length = 376

 Score =  573 bits (1477), Expect = e-161
 Identities = 288/356 (80%), Positives = 306/356 (85%), Gaps = 10/356 (2%)
 Frame = +3

Query: 60   SLTKPITIPTHSKPKSLIHYYS-RPTRINIVGAEAVDYTYP---------GGGMGVHTGR 209
            SL+ PI  P  SK   L  Y   R   ++   +  +D  +P         GG MG +TGR
Sbjct: 12   SLSIPIPQPPKSKSSFLCSYSKIRCESVDYPSSSKIDAKHPQISSINSNGGGKMGSYTGR 71

Query: 210  DPNVKKPAWLRQKAPQGERFSEVKESLSKLKLNTVCEEAQCPNIGECWNGGGDGIATATI 389
            DPNVKKP WLRQKAPQGER+ EVKESLS+LKLNTVC+EAQCPNIGECWNGGGDGIATATI
Sbjct: 72   DPNVKKPEWLRQKAPQGERYDEVKESLSRLKLNTVCQEAQCPNIGECWNGGGDGIATATI 131

Query: 390  MLLGDTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGS 569
            M+LGDTCTRGCRFCAVKTSRNP PPDPMEP NTA AIASWGVDYIV+TSVDRDDLPDGGS
Sbjct: 132  MVLGDTCTRGCRFCAVKTSRNPPPPDPMEPLNTALAIASWGVDYIVITSVDRDDLPDGGS 191

Query: 570  GHFACTVEAMKSLSPDIMVECLTSDFRGDLNAVTSLVHSGLDVFAHNVETVKRLQRIVRD 749
            GHFA TV AMK L P+IMVECLTSDFRGDL AV +LVHSGLDVFAHNVETVKRLQRIVRD
Sbjct: 192  GHFAQTVRAMKELKPEIMVECLTSDFRGDLKAVDTLVHSGLDVFAHNVETVKRLQRIVRD 251

Query: 750  PRAGYEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADLRAIDVDILTLGQYL 929
            PRAGYEQSLSVLKHAK+ K+GMITKTSIMLGLGESD EVKEAMADLRAI VDILT GQYL
Sbjct: 252  PRAGYEQSLSVLKHAKISKKGMITKTSIMLGLGESDNEVKEAMADLRAIGVDILTFGQYL 311

Query: 930  QPTPLHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAGELFVKTMVRE 1097
            QPTPLHLTVKEYVTPEKF FWK+YGESIGFRYVASGPLVRSSYRAGELFVKTMV+E
Sbjct: 312  QPTPLHLTVKEYVTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVKTMVKE 367


>ref|NP_568196.1| lipoyl synthase [Arabidopsis thaliana]
            gi|308191548|sp|Q8LEE8.2|LISC_ARATH RecName: Full=Lipoyl
            synthase, chloroplastic; AltName: Full=Lipoate synthase;
            Short=LS; Short=Lip-syn; AltName: Full=Lipoate synthase,
            plastidial; Short=LIP1p; AltName: Full=Lipoic acid
            synthase; Flags: Precursor gi|20373023|dbj|BAB91180.1|
            lipoic acid synthase [Arabidopsis thaliana]
            gi|98960967|gb|ABF58967.1| At5g08415 [Arabidopsis
            thaliana] gi|332003915|gb|AED91298.1| lipoyl synthase
            [Arabidopsis thaliana]
          Length = 394

 Score =  572 bits (1474), Expect = e-160
 Identities = 278/310 (89%), Positives = 292/310 (94%), Gaps = 2/310 (0%)
 Frame = +3

Query: 174  YPGG--GMGVHTGRDPNVKKPAWLRQKAPQGERFSEVKESLSKLKLNTVCEEAQCPNIGE 347
            YPGG   MG  TGRDPNVKKPAWLRQKAPQGERF EVKESLS+L LNTVCEEAQCPNIGE
Sbjct: 78   YPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPNIGE 137

Query: 348  CWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIV 527
            CWNGGGDG+ATATIM+LGDTCTRGCRFCAVKTSRNP PPDPMEPENTAKAIASWGVDYIV
Sbjct: 138  CWNGGGDGVATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIV 197

Query: 528  LTSVDRDDLPDGGSGHFACTVEAMKSLSPDIMVECLTSDFRGDLNAVTSLVHSGLDVFAH 707
            +TSVDRDD+PDGGSGHFA TV+AMK   PDIM+ECLTSDFRGDL AV +LVHSGLDVFAH
Sbjct: 198  ITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDVFAH 257

Query: 708  NVETVKRLQRIVRDPRAGYEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADL 887
            NVETVKRLQR+VRDPRAGYEQS+SVLKHAK+ K GMITKTSIMLGLGE+DEE+KEAMADL
Sbjct: 258  NVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAMADL 317

Query: 888  RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAG 1067
            RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF FWK YGESIGFRYVASGPLVRSSYRAG
Sbjct: 318  RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPLVRSSYRAG 377

Query: 1068 ELFVKTMVRE 1097
            ELFVKTMV+E
Sbjct: 378  ELFVKTMVKE 387


>gb|AAM62684.1| lipoic acid synthase-like protein [Arabidopsis thaliana]
          Length = 393

 Score =  572 bits (1474), Expect = e-160
 Identities = 278/310 (89%), Positives = 292/310 (94%), Gaps = 2/310 (0%)
 Frame = +3

Query: 174  YPGG--GMGVHTGRDPNVKKPAWLRQKAPQGERFSEVKESLSKLKLNTVCEEAQCPNIGE 347
            YPGG   MG  TGRDPNVKKPAWLRQKAPQGERF EVKESLS+L LNTVCEEAQCPNIGE
Sbjct: 77   YPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPNIGE 136

Query: 348  CWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIV 527
            CWNGGGDG+ATATIM+LGDTCTRGCRFCAVKTSRNP PPDPMEPENTAKAIASWGVDYIV
Sbjct: 137  CWNGGGDGVATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIV 196

Query: 528  LTSVDRDDLPDGGSGHFACTVEAMKSLSPDIMVECLTSDFRGDLNAVTSLVHSGLDVFAH 707
            +TSVDRDD+PDGGSGHFA TV+AMK   PDIM+ECLTSDFRGDL AV +LVHSGLDVFAH
Sbjct: 197  ITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDVFAH 256

Query: 708  NVETVKRLQRIVRDPRAGYEQSLSVLKHAKLCKEGMITKTSIMLGLGESDEEVKEAMADL 887
            NVETVKRLQR+VRDPRAGYEQS+SVLKHAK+ K GMITKTSIMLGLGE+DEE+KEAMADL
Sbjct: 257  NVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAMADL 316

Query: 888  RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAG 1067
            RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKF FWK YGESIGFRYVASGPLVRSSYRAG
Sbjct: 317  RAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPLVRSSYRAG 376

Query: 1068 ELFVKTMVRE 1097
            ELFVKTMV+E
Sbjct: 377  ELFVKTMVKE 386


>ref|XP_002270080.1| PREDICTED: lipoyl synthase, chloroplastic [Vitis vinifera]
            gi|297742716|emb|CBI35350.3| unnamed protein product
            [Vitis vinifera]
          Length = 372

 Score =  571 bits (1471), Expect = e-160
 Identities = 285/353 (80%), Positives = 307/353 (86%), Gaps = 2/353 (0%)
 Frame = +3

Query: 72   PITIPTHSKPKSLIHYYSRPT-RINIVGAEAVDYTYPGGGM-GVHTGRDPNVKKPAWLRQ 245
            P+  P  S   S  H Y+  +  + IVG+ +         + G  TGRDPNVKKPAWLRQ
Sbjct: 18   PLKTPPKSSSHSSTHCYNHTSWGLRIVGSSSSSSNTESKSLNGAFTGRDPNVKKPAWLRQ 77

Query: 246  KAPQGERFSEVKESLSKLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCR 425
            +A QGERF EVK+SLS L LNTVC+EAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCR
Sbjct: 78   RAAQGERFEEVKQSLSHLNLNTVCQEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCR 137

Query: 426  FCAVKTSRNPSPPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFACTVEAMKS 605
            FCAVKTSRNP+PPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFA TV+AMK 
Sbjct: 138  FCAVKTSRNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDLPDGGSGHFARTVKAMKK 197

Query: 606  LSPDIMVECLTSDFRGDLNAVTSLVHSGLDVFAHNVETVKRLQRIVRDPRAGYEQSLSVL 785
              P+IMVECLTSDFRGDL+AV +LVHSGLDVFAHN+ETVKRLQRIVRDPRAGYEQSLSVL
Sbjct: 198  FKPEIMVECLTSDFRGDLSAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLSVL 257

Query: 786  KHAKLCKEGMITKTSIMLGLGESDEEVKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEY 965
            KHAK  K GMITK+SIMLGLGESD+E+KEAMADLRAIDVDILTLGQYLQPTPLHLTVKEY
Sbjct: 258  KHAKHSKVGMITKSSIMLGLGESDDELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEY 317

Query: 966  VTPEKFTFWKDYGESIGFRYVASGPLVRSSYRAGELFVKTMVREKNIFSTTGS 1124
            VTPEKF FWK+YGESIGFRYVASGPLVRSSYRAGELFVK+MVRE+   S T S
Sbjct: 318  VTPEKFAFWKEYGESIGFRYVASGPLVRSSYRAGELFVKSMVRERASASATAS 370