BLASTX nr result
ID: Coptis24_contig00017249
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017249 (435 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containi... 169 3e-40 ref|XP_002531596.1| pentatricopeptide repeat-containing protein,... 162 3e-38 emb|CBI21840.3| unnamed protein product [Vitis vinifera] 161 4e-38 ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi... 161 4e-38 emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera] 161 4e-38 >ref|XP_004168984.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Cucumis sativus] Length = 461 Score = 169 bits (427), Expect = 3e-40 Identities = 75/144 (52%), Positives = 109/144 (75%) Frame = -2 Query: 434 HGIEQAEKYFDTISEQIKKFPVYNALLNSYASAKSIEKAEAFMQQMKQLGLAQSTRSYNV 255 HG+EQ E YFD + Q+K++ V+ ALLN YA K ++KA AFMQ++K++G A S YN+ Sbjct: 111 HGLEQVEDYFDNMPSQLKRYQVHIALLNCYAHEKCVDKANAFMQKIKEMGFANSPLPYNI 170 Query: 254 LLSLYSNVGLYEKLDTLMEEMKENGVHPDKFTLGIRMSAYVANSDIEGMEKNFQHIEVDP 75 +++LY +G +E+LD+L++EMKE GV+ D+FT IR+SAY A SD G+EK + +E +P Sbjct: 171 MMNLYHQIGEFERLDSLLKEMKERGVYYDRFTYSIRISAYAAASDFRGIEKIMEQMESNP 230 Query: 74 NIIMDWDCYAIAANGYIRVGLIDK 3 +I++DW+CY IAAN Y +VGLIDK Sbjct: 231 SIVLDWNCYVIAANAYNKVGLIDK 254 >ref|XP_002531596.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223528792|gb|EEF30799.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 300 Score = 162 bits (410), Expect = 3e-38 Identities = 79/143 (55%), Positives = 105/143 (73%) Frame = -2 Query: 431 GIEQAEKYFDTISEQIKKFPVYNALLNSYASAKSIEKAEAFMQQMKQLGLAQSTRSYNVL 252 GIEQAEKYF+ + +++K VYNALLN YA AKS++KAEA MQ M+ LG A T +YNV+ Sbjct: 132 GIEQAEKYFENVPQKLKVLEVYNALLNCYAYAKSVDKAEAVMQNMRDLGFAGKTLTYNVM 191 Query: 251 LSLYSNVGLYEKLDTLMEEMKENGVHPDKFTLGIRMSAYVANSDIEGMEKNFQHIEVDPN 72 L+L+ G ++KL+ LM EM+ENG+ D+FTLGI++SAY A DI+ MEK +E D N Sbjct: 192 LNLHYQTGNFKKLEALMLEMEENGIAYDRFTLGIQLSAYAAICDIQRMEKIMSRMESDAN 251 Query: 71 IIMDWDCYAIAANGYIRVGLIDK 3 ++ DW YAI ANGY + GL+DK Sbjct: 252 VVTDWCNYAIVANGYRKAGLMDK 274 >emb|CBI21840.3| unnamed protein product [Vitis vinifera] Length = 446 Score = 161 bits (408), Expect = 4e-38 Identities = 77/144 (53%), Positives = 103/144 (71%) Frame = -2 Query: 434 HGIEQAEKYFDTISEQIKKFPVYNALLNSYASAKSIEKAEAFMQQMKQLGLAQSTRSYNV 255 HG+EQAEKYF+ ++ F VY ALLN Y+ KS+EKAEA MQ+M+ +G + T SYNV Sbjct: 117 HGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFVK-TLSYNV 175 Query: 254 LLSLYSNVGLYEKLDTLMEEMKENGVHPDKFTLGIRMSAYVANSDIEGMEKNFQHIEVDP 75 +L LYS +G +EKLD LM+EM+ENG+ D FT IR++AY A SD+EGMEK +E DP Sbjct: 176 MLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETDP 235 Query: 74 NIIMDWDCYAIAANGYIRVGLIDK 3 + DW+ Y +AANGY++ L +K Sbjct: 236 AVNSDWNAYIVAANGYLKADLKEK 259 >ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial [Vitis vinifera] Length = 499 Score = 161 bits (408), Expect = 4e-38 Identities = 77/144 (53%), Positives = 103/144 (71%) Frame = -2 Query: 434 HGIEQAEKYFDTISEQIKKFPVYNALLNSYASAKSIEKAEAFMQQMKQLGLAQSTRSYNV 255 HG+EQAEKYF+ ++ F VY ALLN Y+ KS+EKAEA MQ+M+ +G + T SYNV Sbjct: 117 HGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFVK-TLSYNV 175 Query: 254 LLSLYSNVGLYEKLDTLMEEMKENGVHPDKFTLGIRMSAYVANSDIEGMEKNFQHIEVDP 75 +L LYS +G +EKLD LM+EM+ENG+ D FT IR++AY A SD+EGMEK +E DP Sbjct: 176 MLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETDP 235 Query: 74 NIIMDWDCYAIAANGYIRVGLIDK 3 + DW+ Y +AANGY++ L +K Sbjct: 236 AVNSDWNAYIVAANGYLKADLKEK 259 >emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera] Length = 499 Score = 161 bits (408), Expect = 4e-38 Identities = 77/144 (53%), Positives = 103/144 (71%) Frame = -2 Query: 434 HGIEQAEKYFDTISEQIKKFPVYNALLNSYASAKSIEKAEAFMQQMKQLGLAQSTRSYNV 255 HG+EQAEKYF+ ++ F VY ALLN Y+ KS+EKAEA MQ+M+ +G + T SYNV Sbjct: 117 HGLEQAEKYFNETPNSLRSFQVYGALLNCYSQKKSLEKAEAIMQEMRDMGFVK-TLSYNV 175 Query: 254 LLSLYSNVGLYEKLDTLMEEMKENGVHPDKFTLGIRMSAYVANSDIEGMEKNFQHIEVDP 75 +L LYS +G +EKLD LM+EM+ENG+ D FT IR++AY A SD+EGMEK +E DP Sbjct: 176 MLGLYSRLGKHEKLDNLMQEMEENGIGLDSFTYCIRLNAYCATSDMEGMEKLLMKLETDP 235 Query: 74 NIIMDWDCYAIAANGYIRVGLIDK 3 + DW+ Y +AANGY++ L +K Sbjct: 236 AVNSDWNAYIVAANGYLKADLKEK 259