BLASTX nr result

ID: Coptis24_contig00017242 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017242
         (356 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317696.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29
ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|2...   130   1e-28
ref|XP_003561027.1| PREDICTED: probable LRR receptor-like serine...   126   2e-27
ref|XP_002269642.2| PREDICTED: putative receptor-like protein ki...   125   4e-27
ref|XP_002526889.1| serine-threonine protein kinase, plant-type,...   125   5e-27

>ref|XP_002317696.1| predicted protein [Populus trichocarpa] gi|222858369|gb|EEE95916.1|
            predicted protein [Populus trichocarpa]
          Length = 1018

 Score =  130 bits (328), Expect = 9e-29
 Identities = 66/118 (55%), Positives = 84/118 (71%), Gaps = 1/118 (0%)
 Frame = -1

Query: 356  YVAPEYGMGGPVSTQGDVYSYGILLLEMFTRKKPTDDMFVDGVSLHKYAELALPNQVVEI 177
            YVAPEYGMGG VS  GDVYSYGILLLEMFT K+PTD MF    SLH +A+ ALP+QV EI
Sbjct: 890  YVAPEYGMGGQVSISGDVYSYGILLLEMFTGKRPTDSMFTGNNSLHNFAKTALPDQVSEI 949

Query: 176  VDPSVLVEENDKLLDIANA-ISTRDRLKDCLILTIRLGVTCSADSPAERMNMKEVLSE 6
            +DP + ++         N   S+RD+++ CLI  +++GV CS + P+ERM + EVLSE
Sbjct: 950  IDPLLKIDTQQLAESSRNGPSSSRDKIEGCLISILQIGVLCSVELPSERMVIAEVLSE 1007


>ref|XP_002311065.1| predicted protein [Populus trichocarpa] gi|222850885|gb|EEE88432.1|
            predicted protein [Populus trichocarpa]
          Length = 1032

 Score =  130 bits (327), Expect = 1e-28
 Identities = 63/123 (51%), Positives = 89/123 (72%), Gaps = 5/123 (4%)
 Frame = -1

Query: 356  YVAPEYGMGGPVSTQGDVYSYGILLLEMFTRKKPTDDMFVDGVSLHKYAELALPNQVVEI 177
            Y APEYGMG  VST GDVYSYGILLLEMFT K+PTD MF D ++LH +A++A PN+V EI
Sbjct: 892  YAAPEYGMGSEVSTFGDVYSYGILLLEMFTGKRPTDTMFKDEMNLHNFAKMASPNRVTEI 951

Query: 176  VDPSVLVEENDKLLDIANAISTR-----DRLKDCLILTIRLGVTCSADSPAERMNMKEVL 12
            +DP+++ E  +   D A+  S R     +++ +CL+L I++GV C+ +SP ER+++  V 
Sbjct: 952  LDPALVREAEETSADHASTSSARNHNGTEKIMECLVLIIKVGVACAVESPRERIDISNVA 1011

Query: 11   SEL 3
            +EL
Sbjct: 1012 TEL 1014


>ref|XP_003561027.1| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase
            At3g47570-like [Brachypodium distachyon]
          Length = 1037

 Score =  126 bits (316), Expect = 2e-27
 Identities = 60/118 (50%), Positives = 83/118 (70%)
 Frame = -1

Query: 356  YVAPEYGMGGPVSTQGDVYSYGILLLEMFTRKKPTDDMFVDGVSLHKYAELALPNQVVEI 177
            YVAPEYG G P+ST GDVYS GILLLEMFT + PTDDMF + + LHKY+E A P++++EI
Sbjct: 908  YVAPEYGEGSPISTLGDVYSLGILLLEMFTGRSPTDDMFRESLDLHKYSEAAHPDRILEI 967

Query: 176  VDPSVLVEENDKLLDIANAISTRDRLKDCLILTIRLGVTCSADSPAERMNMKEVLSEL 3
             DP++ +  +      AN  STR R+++CL   IR+G++CS   P ERM +++   E+
Sbjct: 968  ADPAIWLHND------ANDNSTRSRVQECLASAIRIGISCSKQQPRERMPIQDAAMEM 1019


>ref|XP_002269642.2| PREDICTED: putative receptor-like protein kinase At3g47110-like
            [Vitis vinifera]
          Length = 1372

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/118 (49%), Positives = 86/118 (72%)
 Frame = -1

Query: 356  YVAPEYGMGGPVSTQGDVYSYGILLLEMFTRKKPTDDMFVDGVSLHKYAELALPNQVVEI 177
            YVAPEYG+GG +  QGD+YSYGILLLEMFT K+PTD MF DG++LH ++++AL  +V+EI
Sbjct: 1206 YVAPEYGLGGSMWPQGDMYSYGILLLEMFTGKRPTDHMFSDGLNLHSFSKMALLERVMEI 1265

Query: 176  VDPSVLVEENDKLLDIANAISTRDRLKDCLILTIRLGVTCSADSPAERMNMKEVLSEL 3
             D +++ E ++ + +I N      R + CL    R+GV CS +SP +R+++K+V+ EL
Sbjct: 1266 ADSNLVGESSEAINNIENHCDMEGRTQHCLASIARIGVACSEESPGDRLDIKDVVMEL 1323


>ref|XP_002526889.1| serine-threonine protein kinase, plant-type, putative [Ricinus
            communis] gi|223533788|gb|EEF35520.1| serine-threonine
            protein kinase, plant-type, putative [Ricinus communis]
          Length = 891

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/118 (50%), Positives = 84/118 (71%)
 Frame = -1

Query: 356  YVAPEYGMGGPVSTQGDVYSYGILLLEMFTRKKPTDDMFVDGVSLHKYAELALPNQVVEI 177
            YVAPEYG+GG VS +GD+YSYGILLLEM T K+PTDD+F +G SLH   + A P  V +I
Sbjct: 753  YVAPEYGIGGTVSPEGDIYSYGILLLEMITAKRPTDDVFPEGFSLHNTCKRASPENVRDI 812

Query: 176  VDPSVLVEENDKLLDIANAISTRDRLKDCLILTIRLGVTCSADSPAERMNMKEVLSEL 3
            VD  +L +  +    I+N      ++ +CL+  +R+GV+CSA+ P+ERMN+K+V+ EL
Sbjct: 813  VDSYLLQQSVEGSDSISNQHGMNGQMWECLVSFLRIGVSCSAELPSERMNIKDVIKEL 870


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