BLASTX nr result

ID: Coptis24_contig00017241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017241
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513606.1| multidrug resistance-associated protein 1, 3...   164   7e-39
ref|XP_002318362.1| multidrug resistance protein ABC transporter...   164   9e-39
ref|XP_002331826.1| multidrug resistance protein ABC transporter...   162   3e-38
ref|XP_002267650.2| PREDICTED: ABC transporter C family member 1...   159   2e-37
emb|CBI22551.3| unnamed protein product [Vitis vinifera]              159   2e-37

>ref|XP_002513606.1| multidrug resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
            gi|223547514|gb|EEF49009.1| multidrug
            resistance-associated protein 1, 3 (mrp1, 3),
            abc-transoprter, putative [Ricinus communis]
          Length = 1481

 Score =  164 bits (415), Expect = 7e-39
 Identities = 81/95 (85%), Positives = 90/95 (94%)
 Frame = +2

Query: 2    LLSSLFRAPMSFYDSTPLGRILTRVSADLSIVDLDIPFNLILAVGAATNTYANLGVLAVV 181
            LL+SLFRAPMSFYDSTPLGRIL+RVS+DLSIVDLD+PF+LI A+GA TN Y+NLGVLAVV
Sbjct: 993  LLNSLFRAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFSLIFAIGATTNAYSNLGVLAVV 1052

Query: 182  TWQVLFVSIPMVFLAICLQRYYFASAKEVMRINGT 286
            TWQVLFVSIPM+ LAI LQRYYFASAKE+MRINGT
Sbjct: 1053 TWQVLFVSIPMIILAIRLQRYYFASAKELMRINGT 1087


>ref|XP_002318362.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222859035|gb|EEE96582.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1240

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/95 (86%), Positives = 90/95 (94%)
 Frame = +2

Query: 2    LLSSLFRAPMSFYDSTPLGRILTRVSADLSIVDLDIPFNLILAVGAATNTYANLGVLAVV 181
            LL SLFRAPMSFYDSTPLGRIL+RV++DLSIVDLD+PF+LI AVGA TN Y+NLGVLAVV
Sbjct: 762  LLLSLFRAPMSFYDSTPLGRILSRVASDLSIVDLDVPFSLIFAVGATTNAYSNLGVLAVV 821

Query: 182  TWQVLFVSIPMVFLAICLQRYYFASAKEVMRINGT 286
            TWQVLFVSIPMV+LAI LQRYYFASAKE+MRINGT
Sbjct: 822  TWQVLFVSIPMVYLAIRLQRYYFASAKELMRINGT 856


>ref|XP_002331826.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222875064|gb|EEF12195.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1423

 Score =  162 bits (410), Expect = 3e-38
 Identities = 81/95 (85%), Positives = 89/95 (93%)
 Frame = +2

Query: 2    LLSSLFRAPMSFYDSTPLGRILTRVSADLSIVDLDIPFNLILAVGAATNTYANLGVLAVV 181
            LL+SLFRAPMSFYDSTPLGRIL+RV++DLSIVDLD+PF LI AVGA TN Y+NLGVLAVV
Sbjct: 936  LLNSLFRAPMSFYDSTPLGRILSRVTSDLSIVDLDVPFTLIFAVGATTNAYSNLGVLAVV 995

Query: 182  TWQVLFVSIPMVFLAICLQRYYFASAKEVMRINGT 286
            TWQVLFVSIPMV+LAI LQ YYFASAKE+MRINGT
Sbjct: 996  TWQVLFVSIPMVYLAIRLQAYYFASAKELMRINGT 1030


>ref|XP_002267650.2| PREDICTED: ABC transporter C family member 10-like [Vitis vinifera]
          Length = 1532

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/95 (81%), Positives = 88/95 (92%)
 Frame = +2

Query: 2    LLSSLFRAPMSFYDSTPLGRILTRVSADLSIVDLDIPFNLILAVGAATNTYANLGVLAVV 181
            LL+SLFRAPMSFYDSTPLGRIL+R+S DLSIVDLD+PF+ + A GA TN Y+NLGVLAVV
Sbjct: 1044 LLNSLFRAPMSFYDSTPLGRILSRISNDLSIVDLDVPFSFVFAFGATTNAYSNLGVLAVV 1103

Query: 182  TWQVLFVSIPMVFLAICLQRYYFASAKEVMRINGT 286
            TWQVLFVSIPM+++AI LQRYYFASAKE+MRINGT
Sbjct: 1104 TWQVLFVSIPMIYVAIRLQRYYFASAKELMRINGT 1138


>emb|CBI22551.3| unnamed protein product [Vitis vinifera]
          Length = 1395

 Score =  159 bits (402), Expect = 2e-37
 Identities = 77/95 (81%), Positives = 88/95 (92%)
 Frame = +2

Query: 2    LLSSLFRAPMSFYDSTPLGRILTRVSADLSIVDLDIPFNLILAVGAATNTYANLGVLAVV 181
            LL+SLFRAPMSFYDSTPLGRIL+R+S DLSIVDLD+PF+ + A GA TN Y+NLGVLAVV
Sbjct: 907  LLNSLFRAPMSFYDSTPLGRILSRISNDLSIVDLDVPFSFVFAFGATTNAYSNLGVLAVV 966

Query: 182  TWQVLFVSIPMVFLAICLQRYYFASAKEVMRINGT 286
            TWQVLFVSIPM+++AI LQRYYFASAKE+MRINGT
Sbjct: 967  TWQVLFVSIPMIYVAIRLQRYYFASAKELMRINGT 1001


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