BLASTX nr result

ID: Coptis24_contig00017238 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017238
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258...   200   1e-49
ref|XP_002302858.1| predicted protein [Populus trichocarpa] gi|2...   198   3e-49
ref|XP_004156093.1| PREDICTED: uncharacterized protein LOC101225...   198   4e-49
ref|XP_004140245.1| PREDICTED: uncharacterized protein LOC101218...   198   4e-49
ref|XP_002879321.1| EMB1381 [Arabidopsis lyrata subsp. lyrata] g...   197   1e-48

>ref|XP_002271346.1| PREDICTED: uncharacterized protein LOC100258570 [Vitis vinifera]
           gi|297739214|emb|CBI28865.3| unnamed protein product
           [Vitis vinifera]
          Length = 565

 Score =  200 bits (508), Expect = 1e-49
 Identities = 95/157 (60%), Positives = 114/157 (72%), Gaps = 3/157 (1%)
 Frame = +3

Query: 42  MVNKAWKIFPRPLLETILNNHVQHHRVPQPLFLHGPRGVGKTTLILNRLLDGWNKGPHIT 221
           MVNKAWKI PRP+LET+L+NH Q HRVPQPL +HGPRGVGKTTL+L RLL  WNKGPHIT
Sbjct: 1   MVNKAWKIIPRPVLETVLHNHAQRHRVPQPLIVHGPRGVGKTTLVLERLLPEWNKGPHIT 60

Query: 222 GYVDFGGG---NNQEHTCYVPWTSWNNKCLTPPTLKSLNVQLETCLEQLVEKGISLGAIG 392
           GYVD       ++ +H    PWTSW+N    PP+L +L  QLE CLE + EK + LG I 
Sbjct: 61  GYVDLAQSVKDHHPDHNSSYPWTSWSN--CPPPSLTNLRTQLELCLESMAEKAVRLGTIS 118

Query: 393 SQQVFTTLNKWHGINTALHRIIDTRTALPVSGSRSVS 503
           SQQ+FTTLNKWH +NTAL RII++  +   + S  VS
Sbjct: 119 SQQIFTTLNKWHSLNTALRRIIESNKSSSNAVSDKVS 155


>ref|XP_002302858.1| predicted protein [Populus trichocarpa] gi|222844584|gb|EEE82131.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  198 bits (504), Expect = 3e-49
 Identities = 95/159 (59%), Positives = 114/159 (71%), Gaps = 4/159 (2%)
 Frame = +3

Query: 42  MVNKAWKIFPRPLLETILNNHVQHHRVPQPLFLHGPRGVGKTTLILNRLLDGWNKGPHIT 221
           MVNK+WKI PRPLLETILNNH QHHRVPQPL LHGPRGVGKTTL L RLL  WNKGPHIT
Sbjct: 1   MVNKSWKIIPRPLLETILNNHAQHHRVPQPLILHGPRGVGKTTLFLERLLKDWNKGPHIT 60

Query: 222 GYVDFGGG---NNQEHTCYVPWTSWNNKCLTPPTLKSLNVQLETCLEQLVEKGISLGAIG 392
           GYVDF      ++ +H    PW SW++    PPTL +   QLETCLE + +KGI LGAI 
Sbjct: 61  GYVDFAQSIKDHHPQHNNSYPWASWSS--CDPPTLSNCKTQLETCLESMTQKGIQLGAIT 118

Query: 393 SQQVFTTLNKWHGINTALHRI-IDTRTALPVSGSRSVSK 506
           S Q+F+TLNKWH ++T L RI +   + + +    ++SK
Sbjct: 119 SSQIFSTLNKWHRLDTVLRRILLQNNSNIALKSRNAISK 157


>ref|XP_004156093.1| PREDICTED: uncharacterized protein LOC101225211 [Cucumis sativus]
          Length = 563

 Score =  198 bits (503), Expect = 4e-49
 Identities = 93/157 (59%), Positives = 112/157 (71%), Gaps = 3/157 (1%)
 Frame = +3

Query: 42  MVNKAWKIFPRPLLETILNNHVQHHRVPQPLFLHGPRGVGKTTLILNRLLDGWNKGPHIT 221
           MV+K W+I PRPLLET+LNNH QHHRVPQPL LHGPRGVGKTTLIL RLL  WNKGPH++
Sbjct: 1   MVHKPWRIIPRPLLETVLNNHSQHHRVPQPLILHGPRGVGKTTLILERLLADWNKGPHLS 60

Query: 222 GYVDFGGGNNQEHTCY---VPWTSWNNKCLTPPTLKSLNVQLETCLEQLVEKGISLGAIG 392
           GYVDF       H  Y    PW SW+N    PP+L +  ++LE+CLE + EKG+ LG+I 
Sbjct: 61  GYVDFAETIEGHHPIYGQSFPWASWSN--CPPPSLSNCRIKLESCLESMAEKGVKLGSIT 118

Query: 393 SQQVFTTLNKWHGINTALHRIIDTRTALPVSGSRSVS 503
           S Q+FTT+NKWHG+NTAL R++    A     SR  S
Sbjct: 119 SHQIFTTMNKWHGLNTALRRVLQVDNASKRVVSRRAS 155


>ref|XP_004140245.1| PREDICTED: uncharacterized protein LOC101218685 [Cucumis sativus]
          Length = 541

 Score =  198 bits (503), Expect = 4e-49
 Identities = 93/157 (59%), Positives = 112/157 (71%), Gaps = 3/157 (1%)
 Frame = +3

Query: 42  MVNKAWKIFPRPLLETILNNHVQHHRVPQPLFLHGPRGVGKTTLILNRLLDGWNKGPHIT 221
           MV+K W+I PRPLLET+LNNH QHHRVPQPL LHGPRGVGKTTLIL RLL  WNKGPH++
Sbjct: 1   MVHKPWRIIPRPLLETVLNNHSQHHRVPQPLILHGPRGVGKTTLILERLLADWNKGPHLS 60

Query: 222 GYVDFGGGNNQEHTCY---VPWTSWNNKCLTPPTLKSLNVQLETCLEQLVEKGISLGAIG 392
           GYVDF       H  Y    PW SW+N    PP+L +  ++LE+CLE + EKG+ LG+I 
Sbjct: 61  GYVDFAETIEGHHPIYGQSFPWASWSN--CPPPSLSNCRIKLESCLESMAEKGVKLGSIT 118

Query: 393 SQQVFTTLNKWHGINTALHRIIDTRTALPVSGSRSVS 503
           S Q+FTT+NKWHG+NTAL R++    A     SR  S
Sbjct: 119 SHQIFTTMNKWHGLNTALRRVLQVDNASKRVVSRRAS 155


>ref|XP_002879321.1| EMB1381 [Arabidopsis lyrata subsp. lyrata]
           gi|297325160|gb|EFH55580.1| EMB1381 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 559

 Score =  197 bits (500), Expect = 1e-48
 Identities = 91/143 (63%), Positives = 107/143 (74%), Gaps = 3/143 (2%)
 Frame = +3

Query: 42  MVNKAWKIFPRPLLETILNNHVQHHRVPQPLFLHGPRGVGKTTLILNRLLDGWNKGPHIT 221
           MVNK WKI PRPLLET+LNNHVQ HRVPQPL LHGPRGVGKTTLILNRLL  WNKGPH+ 
Sbjct: 1   MVNKPWKIIPRPLLETVLNNHVQRHRVPQPLILHGPRGVGKTTLILNRLLGDWNKGPHLA 60

Query: 222 GYVDFGGGNNQEHTCY---VPWTSWNNKCLTPPTLKSLNVQLETCLEQLVEKGISLGAIG 392
           GYVDF     + H  +    PWTSW +  + PP L +   QLE CLE +  K I LG++ 
Sbjct: 61  GYVDFAQSITEHHPDHHQSYPWTSWTS--VDPPLLSNCKTQLENCLESMSHKAIKLGSLS 118

Query: 393 SQQVFTTLNKWHGINTALHRIID 461
           SQQ+FTT+NKW+G+NTAL RI++
Sbjct: 119 SQQIFTTMNKWYGLNTALRRILE 141


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