BLASTX nr result
ID: Coptis24_contig00017235
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017235 (1227 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EAZ04706.1| hypothetical protein OsI_26867 [Oryza sativa Indi... 75 4e-11 tpg|DAA63601.1| TPA: FAR1-domain family sequence [Zea mays] 73 1e-10 ref|NP_001146631.1| uncharacterized protein LOC100280229 [Zea ma... 73 1e-10 dbj|BAG93645.1| unnamed protein product [Oryza sativa Japonica G... 72 3e-10 ref|NP_001060272.1| Os07g0615900 [Oryza sativa Japonica Group] g... 72 3e-10 >gb|EAZ04706.1| hypothetical protein OsI_26867 [Oryza sativa Indica Group] Length = 512 Score = 74.7 bits (182), Expect = 4e-11 Identities = 53/152 (34%), Positives = 70/152 (46%), Gaps = 3/152 (1%) Frame = -1 Query: 1110 ISNLVPVVGMVFTTDMEAYNFYNRYAKKAGFSVRKKTSYCNSNGKVKRRDLCCSLEGI-- 937 ++ LVP VGM F ++ +AY FYN+YA GFSVRK TS+ +S K R CS EG Sbjct: 179 LAKLVPEVGMEFESEDKAYEFYNKYAGHVGFSVRKSTSHKSSGNITKVRTFVCSREGYNR 238 Query: 936 CQXXXXXXXXXXXXRCGCEAMLIVRLDENEKYVVTSFVXXXXXXXXXXXXXXNLRSHR-Q 760 + R GC A LI+++ KY VT F LRS R Sbjct: 239 DKKSLEAKKPRLDTRIGCPARLIIKVTPESKYRVTDFKAEHNHQLAPPSTMHMLRSQRIL 298 Query: 759 TEPSEVAFLTTMDAMTNPVRDSCGELVFVENA 664 TE + D++ P + G+LV E A Sbjct: 299 TELQSGEAELSDDSVMTPTTKATGDLVHYERA 330 >tpg|DAA63601.1| TPA: FAR1-domain family sequence [Zea mays] Length = 648 Score = 73.2 bits (178), Expect = 1e-10 Identities = 51/149 (34%), Positives = 70/149 (46%), Gaps = 5/149 (3%) Frame = -1 Query: 1110 ISNLVPVVGMVFTTDMEAYNFYNRYAKKAGFSVRKKTSYCNSNGKVKRRDLCCSLEGI-- 937 ++ LVP VGM F ++ +AY FYN+YA GFSVRK TS+ +S K R CS EG Sbjct: 39 LAKLVPEVGMEFVSEEKAYEFYNKYAGHVGFSVRKSTSHKSSENITKVRTFVCSREGYNR 98 Query: 936 CQXXXXXXXXXXXXRCGCEAMLIVRLDENEKYVVTSFVXXXXXXXXXXXXXXNLRSHR-- 763 + R GC A LI+++ KY VT F LRS R Sbjct: 99 DKKSLEAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKADHNHQLAPPSTMHMLRSQRIL 158 Query: 762 -QTEPSEVAFLTTMDAMTNPVRDSCGELV 679 + +P E + D++ P + G+LV Sbjct: 159 TELQPGEAEL--SDDSVVTPTTKATGDLV 185 >ref|NP_001146631.1| uncharacterized protein LOC100280229 [Zea mays] gi|219888101|gb|ACL54425.1| unknown [Zea mays] gi|323388779|gb|ADX60194.1| FAR1 transcription factor [Zea mays] gi|414887586|tpg|DAA63600.1| TPA: FAR1-domain family sequence [Zea mays] Length = 704 Score = 73.2 bits (178), Expect = 1e-10 Identities = 51/149 (34%), Positives = 70/149 (46%), Gaps = 5/149 (3%) Frame = -1 Query: 1110 ISNLVPVVGMVFTTDMEAYNFYNRYAKKAGFSVRKKTSYCNSNGKVKRRDLCCSLEGI-- 937 ++ LVP VGM F ++ +AY FYN+YA GFSVRK TS+ +S K R CS EG Sbjct: 95 LAKLVPEVGMEFVSEEKAYEFYNKYAGHVGFSVRKSTSHKSSENITKVRTFVCSREGYNR 154 Query: 936 CQXXXXXXXXXXXXRCGCEAMLIVRLDENEKYVVTSFVXXXXXXXXXXXXXXNLRSHR-- 763 + R GC A LI+++ KY VT F LRS R Sbjct: 155 DKKSLEAKKPRLDTRIGCPARLIIKVTPECKYRVTDFKADHNHQLAPPSTMHMLRSQRIL 214 Query: 762 -QTEPSEVAFLTTMDAMTNPVRDSCGELV 679 + +P E + D++ P + G+LV Sbjct: 215 TELQPGEAEL--SDDSVVTPTTKATGDLV 241 >dbj|BAG93645.1| unnamed protein product [Oryza sativa Japonica Group] Length = 742 Score = 72.0 bits (175), Expect = 3e-10 Identities = 51/147 (34%), Positives = 68/147 (46%), Gaps = 3/147 (2%) Frame = -1 Query: 1110 ISNLVPVVGMVFTTDMEAYNFYNRYAKKAGFSVRKKTSYCNSNGKVKRRDLCCSLEGI-- 937 ++ LVP VGM F ++ +AY FYN+YA GFSVRK TS+ +S K R CS EG Sbjct: 116 LAKLVPEVGMEFESEDKAYEFYNKYAGHVGFSVRKSTSHKSSGNITKVRTFVCSREGYNR 175 Query: 936 CQXXXXXXXXXXXXRCGCEAMLIVRLDENEKYVVTSFVXXXXXXXXXXXXXXNLRSHR-Q 760 + R GC A LI+++ KY VT F LRS R Sbjct: 176 DKKSLEAKKPRLDTRIGCPARLIIKVTPESKYRVTDFKADHNHQLAPPSTMHMLRSQRIL 235 Query: 759 TEPSEVAFLTTMDAMTNPVRDSCGELV 679 TE + D++ P + G+LV Sbjct: 236 TELQSGEAELSDDSVMTPTTKATGDLV 262 >ref|NP_001060272.1| Os07g0615900 [Oryza sativa Japonica Group] gi|113611808|dbj|BAF22186.1| Os07g0615900 [Oryza sativa Japonica Group] gi|215694717|dbj|BAG89908.1| unnamed protein product [Oryza sativa Japonica Group] Length = 732 Score = 72.0 bits (175), Expect = 3e-10 Identities = 51/147 (34%), Positives = 68/147 (46%), Gaps = 3/147 (2%) Frame = -1 Query: 1110 ISNLVPVVGMVFTTDMEAYNFYNRYAKKAGFSVRKKTSYCNSNGKVKRRDLCCSLEGI-- 937 ++ LVP VGM F ++ +AY FYN+YA GFSVRK TS+ +S K R CS EG Sbjct: 116 LAKLVPEVGMEFESEDKAYEFYNKYAGHVGFSVRKSTSHKSSGNITKVRTFVCSREGYNR 175 Query: 936 CQXXXXXXXXXXXXRCGCEAMLIVRLDENEKYVVTSFVXXXXXXXXXXXXXXNLRSHR-Q 760 + R GC A LI+++ KY VT F LRS R Sbjct: 176 DKKSLEAKKPRLDTRIGCPARLIIKVTPESKYRVTDFKADHNHQLAPPSTMHMLRSQRIL 235 Query: 759 TEPSEVAFLTTMDAMTNPVRDSCGELV 679 TE + D++ P + G+LV Sbjct: 236 TELQSGEAELSDDSVMTPTTKATGDLV 262