BLASTX nr result

ID: Coptis24_contig00017222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017222
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520394.1| protein with unknown function [Ricinus commu...    76   1e-11
ref|XP_002283816.1| PREDICTED: uncharacterized protein LOC100247...    67   6e-09
emb|CAN71058.1| hypothetical protein VITISV_030011 [Vitis vinifera]    67   6e-09
ref|XP_002300884.1| predicted protein [Populus trichocarpa] gi|2...    63   1e-07

>ref|XP_002520394.1| protein with unknown function [Ricinus communis]
           gi|223540441|gb|EEF42010.1| protein with unknown
           function [Ricinus communis]
          Length = 275

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 71/213 (33%), Positives = 101/213 (47%), Gaps = 21/213 (9%)
 Frame = +3

Query: 138 LMDEIEGLKQNETEHEQDKKALEAISTRASQLEIEVSRLQHDFISSASENEDLGKELKQI 317
           L  EIE L+  E++ E  KKAL+A++ RASQLE EVSRLQHD IS+ S  ++   E++++
Sbjct: 55  LTAEIELLRSKESDAEAQKKALDAVAARASQLETEVSRLQHDLISAMSAEDEANNEIREL 114

Query: 318 K------------VKFEEMEI--RIXXXXXXXXXXXXXXGDYLDKVV----EISARVDEK 443
           K            VK E++EI  ++               +   K V    E+  ++DEK
Sbjct: 115 KKIIGEKETDIEEVKKEKVEIERKVRELERKIGVLEVKEIEERSKRVRIEEEMREKIDEK 174

Query: 444 EDEIARLKCVIKEKEAENA-VLKESGAKMAEIEDKYNXXXXXXXXXXXXXXXNGNG-NGI 617
           E E+   K    E E  +A  L++S  +  EIE K                 +  G NGI
Sbjct: 175 EKEVFAYKNKFLELENNSAKKLEKSEERAREIEGKVAEMQKKLEETEKMKERSLEGVNGI 234

Query: 618 GTDAVVENGENEKVGFKGLKGFKWPV-ALASTG 713
           G       GE+ +  +K  K   WPV AL STG
Sbjct: 235 G-------GESTETEYK--KMMDWPVIALGSTG 258


>ref|XP_002283816.1| PREDICTED: uncharacterized protein LOC100247157 [Vitis vinifera]
          Length = 327

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 48/146 (32%), Positives = 69/146 (47%), Gaps = 25/146 (17%)
 Frame = +3

Query: 147 EIEGLKQNETEHEQDKKALEAISTRASQLEIEVSRLQHDFISSASENEDLGKELKQIKVK 326
           ++E + +     E DKKAL+ I  RA +LE EVSRLQHD IS++SE ++   E+ Q+K  
Sbjct: 80  KLEEMMREIERSESDKKALDVIGARAVELETEVSRLQHDLISASSEADEANAEVMQLKRI 139

Query: 327 FEEMEIRIXXXXXXXXXXXXXXG-------DYLDKV------------------VEISAR 431
            EE E+R+              G       D  +K+                   E   +
Sbjct: 140 LEEKELRVENLEKEKGLIEKEKGENESRLRDLEEKIRVMEVKESKTNEEKIKIEQETKEK 199

Query: 432 VDEKEDEIARLKCVIKEKEAENAVLK 509
           +DEKE EI+ LK  I+E +A    LK
Sbjct: 200 IDEKEREISNLKSDIEELKASIEHLK 225


>emb|CAN71058.1| hypothetical protein VITISV_030011 [Vitis vinifera]
          Length = 480

 Score = 67.0 bits (162), Expect = 6e-09
 Identities = 48/146 (32%), Positives = 69/146 (47%), Gaps = 25/146 (17%)
 Frame = +3

Query: 147 EIEGLKQNETEHEQDKKALEAISTRASQLEIEVSRLQHDFISSASENEDLGKELKQIKVK 326
           ++E + +     E DKKAL+ I  RA +LE EVSRLQHD IS++SE ++   E+ Q+K  
Sbjct: 233 KLEEMMREIERSESDKKALDVIGARAVELETEVSRLQHDLISASSEADEANAEVMQLKRI 292

Query: 327 FEEMEIRIXXXXXXXXXXXXXXG-------DYLDKV------------------VEISAR 431
            EE E+R+              G       D  +K+                   E   +
Sbjct: 293 LEEKELRVENLEKEKGLIEKEKGENESRLRDLEEKIRVMEVKESKTNEEKIKIEQETKEK 352

Query: 432 VDEKEDEIARLKCVIKEKEAENAVLK 509
           +DEKE EI+ LK  I+E +A    LK
Sbjct: 353 IDEKEREISNLKSDIEELKASIEHLK 378


>ref|XP_002300884.1| predicted protein [Populus trichocarpa] gi|222842610|gb|EEE80157.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 25/154 (16%)
 Frame = +3

Query: 159 LKQNETEHEQDKKALEAISTRASQLEIEVSRLQHDFISSASENEDLGKELKQIKVKFEEM 338
           L++   + E+ ++ALE+I+ RA++LE  VSRLQHD IS+ SE ++  KE+ ++K +  E 
Sbjct: 82  LEREVEQSEETQRALESIAGRAAELETNVSRLQHDLISAMSEGDEANKEVAELKREVSEK 141

Query: 339 EIRI-------------------------XXXXXXXXXXXXXXGDYLDKVVEISARVDEK 443
           E++I                                        D  +KV E    + + 
Sbjct: 142 EVKIEEVKKEKSEAEKKVRELERKIGVLEVKEIEEKSKKVRLEEDMREKVTEKDKEIIDC 201

Query: 444 EDEIARLKCVIKEKEAENAVLKESGAKMAEIEDK 545
           +  I  L+ ++ EKE     L+ES  K+ E+E K
Sbjct: 202 KKRIKELESLVVEKERLEKKLRESEEKVKEMEGK 235


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