BLASTX nr result
ID: Coptis24_contig00017220
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017220 (2164 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containi... 588 e-165 emb|CBI33534.3| unnamed protein product [Vitis vinifera] 586 e-165 ref|XP_002301697.1| predicted protein [Populus trichocarpa] gi|2... 586 e-165 ref|XP_002532468.1| pentatricopeptide repeat-containing protein,... 563 e-158 ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containi... 546 e-153 >ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Vitis vinifera] Length = 502 Score = 588 bits (1516), Expect = e-165 Identities = 288/483 (59%), Positives = 367/483 (75%) Frame = -1 Query: 2095 RTKKRPTSQPDPSPNKKPHEKKRPTFPSYLQTPNLPPKIKLVCEILANTPTPNVETTLED 1916 R K+ +S D + + + KRP+FP+YL+TPNL PK++L+CEI+ANTP+ VE L D Sbjct: 23 RNKRHSSSTTDSATHHQT--PKRPSFPTYLETPNLSPKVRLLCEIIANTPSSTVEEVLHD 80 Query: 1915 TGIRVTTDDVEQVLKLSYAHPGPAVKFFRWSGKQLNDNHSPYGWNLVVDLLGNNSLFEAM 1736 T IRV+ +DVE LKLSY PG AVKFFRWSG QLNDNHSPY WNLVVD+LG N LF+AM Sbjct: 81 TAIRVSPEDVEDSLKLSYGFPGSAVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAM 140 Query: 1735 WDAIKSMKKEGLLSLATFASVFSSYVVGECVEEAMMTFEVMDQYGCARDVVALNSLLSAI 1556 WDA+KSMKK+GLLSLATFAS+FSSYV+ + V EA+MTF+VM+QYGC RD+VALNSLLSAI Sbjct: 141 WDAVKSMKKQGLLSLATFASIFSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAI 200 Query: 1555 CRQGKTVKAWEFLHIAKEKIRPDGDTYAILLEGWESEGDVGNAHKTFEEMVIQFGWDPVN 1376 CR G+TV+A EFL + IRPD DTYAILLEGWESEG+ G A +TF+EMV+ GWDP N Sbjct: 201 CRDGRTVQAAEFLRNVRGLIRPDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGN 260 Query: 1375 VPGYDAFLNTLLKSHHDGVRETMKFFDVMKSNRCFPGMKFFRSALNEFLKTSNLRDASNV 1196 V YD+FLN LL DG RE MKFF++M+ +C PGM+F+R L E +KTS+ + A + Sbjct: 261 VSAYDSFLNALLHG-PDGRREAMKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLL 319 Query: 1195 WETMVRLNGCKPDTEMYNGMMSLQCYLNQADVAYRLLDEMVFYGAFPDSKTYSTLLKFML 1016 W+TM+ N C+PDTEMYN M++L C + +A +LDEMV GAFPDS+TY+ L +F++ Sbjct: 320 WQTMLSRNICRPDTEMYNSMIALHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLI 379 Query: 1015 KLRKVREVSVVFNEMVKNEFIPTHENCSAALTLYVDIGDPDMAIKIWKCMLENEMMPGWE 836 + RK+ E +F+EMV+NE +P NC+AA+ +Y+D+GD AIK+WK ++EN G E Sbjct: 380 RRRKLEEAFSIFSEMVQNECVPDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENH-DSGLE 438 Query: 835 IAGNKLIVGLRDLNRLPEARKYAEDMIERGIKLHSKTLSKLKQSLTQLGKAYAYDELLRK 656 GN L+ GLRD +R+PEA KYA+DMI RGIKL S TLSKLK +L ++GK YDELLRK Sbjct: 439 ETGNLLVTGLRDHDRIPEAVKYAKDMIVRGIKLTSSTLSKLKHALVEVGKGPVYDELLRK 498 Query: 655 WKS 647 WK+ Sbjct: 499 WKT 501 >emb|CBI33534.3| unnamed protein product [Vitis vinifera] Length = 506 Score = 586 bits (1511), Expect = e-165 Identities = 284/462 (61%), Positives = 358/462 (77%) Frame = -1 Query: 2032 KRPTFPSYLQTPNLPPKIKLVCEILANTPTPNVETTLEDTGIRVTTDDVEQVLKLSYAHP 1853 KRP+FP+YL+TPNL PK++L+CEI+ANTP+ VE L DT IRV+ +DVE LKLSY P Sbjct: 46 KRPSFPTYLETPNLSPKVRLLCEIIANTPSSTVEEVLHDTAIRVSPEDVEDSLKLSYGFP 105 Query: 1852 GPAVKFFRWSGKQLNDNHSPYGWNLVVDLLGNNSLFEAMWDAIKSMKKEGLLSLATFASV 1673 G AVKFFRWSG QLNDNHSPY WNLVVD+LG N LF+AMWDA+KSMKK+GLLSLATFAS+ Sbjct: 106 GSAVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQGLLSLATFASI 165 Query: 1672 FSSYVVGECVEEAMMTFEVMDQYGCARDVVALNSLLSAICRQGKTVKAWEFLHIAKEKIR 1493 FSSYV+ + V EA+MTF+VM+QYGC RD+VALNSLLSAICR G+TV+A EFL + IR Sbjct: 166 FSSYVIADRVREAIMTFDVMEQYGCPRDIVALNSLLSAICRDGRTVQAAEFLRNVRGLIR 225 Query: 1492 PDGDTYAILLEGWESEGDVGNAHKTFEEMVIQFGWDPVNVPGYDAFLNTLLKSHHDGVRE 1313 PD DTYAILLEGWESEG+ G A +TF+EMV+ GWDP NV YD+FLN LL DG RE Sbjct: 226 PDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNALLHG-PDGRRE 284 Query: 1312 TMKFFDVMKSNRCFPGMKFFRSALNEFLKTSNLRDASNVWETMVRLNGCKPDTEMYNGMM 1133 MKFF++M+ +C PGM+F+R L E +KTS+ + A +W+TM+ N C+PDTEMYN M+ Sbjct: 285 AMKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNICRPDTEMYNSMI 344 Query: 1132 SLQCYLNQADVAYRLLDEMVFYGAFPDSKTYSTLLKFMLKLRKVREVSVVFNEMVKNEFI 953 +L C + +A +LDEMV GAFPDS+TY+ L +F+++ RK+ E +F+EMV+NE + Sbjct: 345 ALHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSIFSEMVQNECV 404 Query: 952 PTHENCSAALTLYVDIGDPDMAIKIWKCMLENEMMPGWEIAGNKLIVGLRDLNRLPEARK 773 P NC+AA+ +Y+D+GD AIK+WK ++EN G E GN L+ GLRD +R+PEA K Sbjct: 405 PDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENH-DSGLEETGNLLVTGLRDHDRIPEAVK 463 Query: 772 YAEDMIERGIKLHSKTLSKLKQSLTQLGKAYAYDELLRKWKS 647 YA+DMI RGIKL S TLSKLK +L ++GK YDELLRKWK+ Sbjct: 464 YAKDMIVRGIKLTSSTLSKLKHALVEVGKGPVYDELLRKWKT 505 >ref|XP_002301697.1| predicted protein [Populus trichocarpa] gi|222843423|gb|EEE80970.1| predicted protein [Populus trichocarpa] Length = 499 Score = 586 bits (1511), Expect = e-165 Identities = 287/463 (61%), Positives = 357/463 (77%) Frame = -1 Query: 2032 KRPTFPSYLQTPNLPPKIKLVCEILANTPTPNVETTLEDTGIRVTTDDVEQVLKLSYAHP 1853 K+P+F SYL+TPNLPP IKL+CEI+ANTP+ NVE+ L+ T IRV DVEQVLKLSY+ P Sbjct: 35 KKPSFQSYLETPNLPPTIKLLCEIIANTPSHNVESVLDATVIRVKQTDVEQVLKLSYSSP 94 Query: 1852 GPAVKFFRWSGKQLNDNHSPYGWNLVVDLLGNNSLFEAMWDAIKSMKKEGLLSLATFASV 1673 G AVKFFRW+G QLND HSPY WNLVVDLLG NS+F+AMW AIKSMK+E L+SLATFASV Sbjct: 95 GSAVKFFRWAGLQLNDKHSPYSWNLVVDLLGKNSMFDAMWGAIKSMKRENLVSLATFASV 154 Query: 1672 FSSYVVGECVEEAMMTFEVMDQYGCARDVVALNSLLSAICRQGKTVKAWEFLHIAKEKIR 1493 FSSYV+ + V+EA+MTFEVMDQYGC R+VVALNSLLSAICR+G+T A EFLH+AK +I Sbjct: 155 FSSYVIVDRVKEAIMTFEVMDQYGCTRNVVALNSLLSAICREGRTFDAVEFLHVAKNRIL 214 Query: 1492 PDGDTYAILLEGWESEGDVGNAHKTFEEMVIQFGWDPVNVPGYDAFLNTLLKSHHDGVRE 1313 PD D+YAILLEGWE E +V +A TF +MV GWDP NVP YD FL+TLL +DG+RE Sbjct: 215 PDADSYAILLEGWEKEMNVASARTTFADMVSMVGWDPRNVPAYDTFLSTLLMG-YDGLRE 273 Query: 1312 TMKFFDVMKSNRCFPGMKFFRSALNEFLKTSNLRDASNVWETMVRLNGCKPDTEMYNGMM 1133 MK FD MK CFPG+KFFR AL E LK +++R A +WET+V G +PD ++YN M+ Sbjct: 274 AMKHFDTMKDRGCFPGVKFFRLALEECLKCNDVRAAMLIWETLVARVGFRPDIQLYNLMI 333 Query: 1132 SLQCYLNQADVAYRLLDEMVFYGAFPDSKTYSTLLKFMLKLRKVREVSVVFNEMVKNEFI 953 + CY NQ D+A + LDEM++ G FPDS+TY+ L ++++K +K++E S V NEM+KNEF Sbjct: 334 GIHCYDNQTDIANKFLDEMIYNGVFPDSQTYNVLFQYLIKYKKLKEASFVLNEMIKNEFF 393 Query: 952 PTHENCSAALTLYVDIGDPDMAIKIWKCMLENEMMPGWEIAGNKLIVGLRDLNRLPEARK 773 P NC+AA+ Y+D +P MAIK+WKCM+EN E AGN L+V LR + +PEA K Sbjct: 394 PNKTNCNAAIKAYMDSKEPYMAIKVWKCMMENYGESDLEEAGNMLVVELRYHHMVPEAVK 453 Query: 772 YAEDMIERGIKLHSKTLSKLKQSLTQLGKAYAYDELLRKWKSN 644 YAE MIE+GIKL S +LSKLKQ L + K Y+ELLRKWK++ Sbjct: 454 YAEVMIEKGIKLTSSSLSKLKQMLNEEKKPILYEELLRKWKAH 496 >ref|XP_002532468.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223527826|gb|EEF29924.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 510 Score = 563 bits (1451), Expect = e-158 Identities = 277/465 (59%), Positives = 347/465 (74%) Frame = -1 Query: 2041 HEKKRPTFPSYLQTPNLPPKIKLVCEILANTPTPNVETTLEDTGIRVTTDDVEQVLKLSY 1862 + K PTFPSYL+TPNL PKIKL+CEI+A P+ VET L++TG+ V+ DVEQV+KLSY Sbjct: 47 YPNKHPTFPSYLETPNLSPKIKLLCEIIAKIPSSTVETILDETGLYVSQYDVEQVIKLSY 106 Query: 1861 AHPGPAVKFFRWSGKQLNDNHSPYGWNLVVDLLGNNSLFEAMWDAIKSMKKEGLLSLATF 1682 + PGPAVKFFRW+G +L DNHSPY WNLVVDLLG N LF+AMWDAIKSMK + L+SLATF Sbjct: 107 SFPGPAVKFFRWAGFRLQDNHSPYSWNLVVDLLGKNCLFDAMWDAIKSMKSKELVSLATF 166 Query: 1681 ASVFSSYVVGECVEEAMMTFEVMDQYGCARDVVALNSLLSAICRQGKTVKAWEFLHIAKE 1502 ASVF SYV V++A+ TFEVM+QYG RDVVALNSLLSAICR GKTV A +FL +AK Sbjct: 167 ASVFGSYVTAGRVKDAIFTFEVMNQYGVVRDVVALNSLLSAICRDGKTVDAVDFLFVAKN 226 Query: 1501 KIRPDGDTYAILLEGWESEGDVGNAHKTFEEMVIQFGWDPVNVPGYDAFLNTLLKSHHDG 1322 I+PD DT+AILLEGWE E ++ N+ +TF+EMV + GWDP N P YD FL TLL G Sbjct: 227 SIKPDADTFAILLEGWEKELNLVNSRQTFDEMVREIGWDPANTPAYDTFLCTLLMG-RIG 285 Query: 1321 VRETMKFFDVMKSNRCFPGMKFFRSALNEFLKTSNLRDASNVWETMVRLNGCKPDTEMYN 1142 E ++F ++MK RC PGM+FFR+A+ E LK +++R A +WE M+ NG +PD EMYN Sbjct: 286 FNEVIEFLEIMKEKRCCPGMRFFRAAIEECLKVNDVRVAGLIWEVMMETNGFRPDIEMYN 345 Query: 1141 GMMSLQCYLNQADVAYRLLDEMVFYGAFPDSKTYSTLLKFMLKLRKVREVSVVFNEMVKN 962 M+SL CY N D+A R LDEMV+ G FPD +TY+ L +F++K RK++E SV+FNEM+KN Sbjct: 346 LMISLYCYTNNTDIALRFLDEMVYNGVFPDRQTYNLLFQFLIKSRKLKEASVLFNEMIKN 405 Query: 961 EFIPTHENCSAALTLYVDIGDPDMAIKIWKCMLENEMMPGWEIAGNKLIVGLRDLNRLPE 782 E +P NCSAA+ +++ DP MAIK+WKCM+EN + E GN LIV L DL+ PE Sbjct: 406 ECLPNQANCSAAVRVFMHSKDPYMAIKVWKCMIENYEL-DLEETGNLLIVELCDLHMDPE 464 Query: 781 ARKYAEDMIERGIKLHSKTLSKLKQSLTQLGKAYAYDELLRKWKS 647 A KYAE MI +GIK+ S T+ KLK L Q K + Y+ LLRKWK+ Sbjct: 465 AVKYAESMIGKGIKVTSPTMEKLKLCLKQARKEFVYERLLRKWKA 509 >ref|XP_003552963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Glycine max] Length = 485 Score = 546 bits (1407), Expect = e-153 Identities = 277/485 (57%), Positives = 349/485 (71%), Gaps = 1/485 (0%) Frame = -1 Query: 2095 RTKKRPTSQPDPSP-NKKPHEKKRPTFPSYLQTPNLPPKIKLVCEILANTPTPNVETTLE 1919 R K+ S PSP +KKP TFPS+ PNLP IK +C ++A T +VE +L+ Sbjct: 8 RRKRAHPSSSSPSPISKKPQ-----TFPSFQDIPNLPSNIKSLCHLIATTSAASVEHSLQ 62 Query: 1918 DTGIRVTTDDVEQVLKLSYAHPGPAVKFFRWSGKQLNDNHSPYGWNLVVDLLGNNSLFEA 1739 I VT DVE+VLKLSY PG AVKFFRWSG+ LNDNH+PY WNLVVD+LG N F+A Sbjct: 63 SAAISVTPHDVEEVLKLSYGFPGQAVKFFRWSGRHLNDNHTPYSWNLVVDILGKNRFFDA 122 Query: 1738 MWDAIKSMKKEGLLSLATFASVFSSYVVGECVEEAMMTFEVMDQYGCARDVVALNSLLSA 1559 MWDAIKSM KEGLLSLATFASVFSSYV + + EA+M FE+MD Y RDVVALNSLLSA Sbjct: 123 MWDAIKSMNKEGLLSLATFASVFSSYVAADRIREAIMAFEIMDNYCVVRDVVALNSLLSA 182 Query: 1558 ICRQGKTVKAWEFLHIAKEKIRPDGDTYAILLEGWESEGDVGNAHKTFEEMVIQFGWDPV 1379 IC G+T+ A ++L +AK+ +RPD DTYAIL+EGWE E V A +TF EMVI+ GWDP+ Sbjct: 183 ICSNGRTLDACDYLQVAKKLVRPDTDTYAILMEGWEGENGVVGAKETFAEMVIEIGWDPL 242 Query: 1378 NVPGYDAFLNTLLKSHHDGVRETMKFFDVMKSNRCFPGMKFFRSALNEFLKTSNLRDASN 1199 NVP YD+FL TL++ DG+ E +KF D M+ RCFPG++F ++AL+E +K+ ++R A Sbjct: 243 NVPAYDSFLCTLVRG-PDGLLEAIKFVDSMRDRRCFPGVRFLKAALDECVKSHDVRTAEF 301 Query: 1198 VWETMVRLNGCKPDTEMYNGMMSLQCYLNQADVAYRLLDEMVFYGAFPDSKTYSTLLKFM 1019 WE +V +P EMYN M+ L CY D A R+LDEMV+ GAFPD +TY+ L KF+ Sbjct: 302 FWEVLVVGKVVQPTAEMYNLMIGLCCYRGDTDAARRMLDEMVYQGAFPDVETYNLLFKFL 361 Query: 1018 LKLRKVREVSVVFNEMVKNEFIPTHENCSAALTLYVDIGDPDMAIKIWKCMLENEMMPGW 839 +K RK+RE SVVF EMVKNE +P +NC AA+ YVD G+P MAIK+WK ++EN Sbjct: 362 IKGRKLREASVVFAEMVKNECVPEQDNCDAAVKAYVDCGEPVMAIKVWKYLVEN-YKKDL 420 Query: 838 EIAGNKLIVGLRDLNRLPEARKYAEDMIERGIKLHSKTLSKLKQSLTQLGKAYAYDELLR 659 E N L+VGLRDLNRLPEA KYAEDMI+R I+L S T+SKL+QSL + + + Y++LLR Sbjct: 421 ERTANFLVVGLRDLNRLPEAVKYAEDMIDREIRLSSNTMSKLRQSLIKERREFVYEDLLR 480 Query: 658 KWKSN 644 K KS+ Sbjct: 481 KSKSH 485