BLASTX nr result

ID: Coptis24_contig00017204 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017204
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27323.3| unnamed protein product [Vitis vinifera]              319   8e-85
ref|XP_002316014.1| predicted protein [Populus trichocarpa] gi|2...   300   5e-79
ref|XP_003535271.1| PREDICTED: nucleolar protein 14-like [Glycin...   271   2e-70
ref|XP_002464264.1| hypothetical protein SORBIDRAFT_01g015150 [S...   239   6e-61
ref|XP_004165503.1| PREDICTED: nucleolar protein 14-like [Cucumi...   239   1e-60

>emb|CBI27323.3| unnamed protein product [Vitis vinifera]
          Length = 899

 Score =  319 bits (817), Expect = 8e-85
 Identities = 180/317 (56%), Positives = 220/317 (69%), Gaps = 14/317 (4%)
 Frame = +2

Query: 152  NNPFETIWSRRKFDIIGKKRKGEQQRTGLARSRGIEKRKGTLLKEYEQSGKSSVFVDKRI 331
            +NPFETIWSR KFDI+GKKRKGEQ+R GLARSR I+KR  TLLKEYEQS KSSVF+DKRI
Sbjct: 8    SNPFETIWSRTKFDILGKKRKGEQKRIGLARSRAIQKRNATLLKEYEQSAKSSVFLDKRI 67

Query: 332  GEQNESLGEFDKAILRSQRQRQ---NKKSKYNLSDGEDEYDEIDGVXXXXXXXXXXXXXX 502
            GEQN++LGEFDKAILRSQR+RQ    KKSKYNLSDGE++  EI+GV              
Sbjct: 68   GEQNDALGEFDKAILRSQRERQLKLKKKSKYNLSDGEEDEFEIEGVPSFSERDDFEDEMV 127

Query: 503  XXXXXXXXXQA--------LLKRVNDRNMHDPLETGLGEG---RHKSKKEVMEELILKSK 649
                     +         LLK+VN  +M +  + GL EG   +HKSKKEVMEE+I KSK
Sbjct: 128  PDDDDDDGAEGAGTEKKPTLLKQVNAHDMQNQSQRGLMEGEENKHKSKKEVMEEIISKSK 187

Query: 650  YFKAQKSKDKEENEELKEQLDKDFTSLLQSEALLSLTQPSKMNALNALVNKGDSKENLIK 829
            ++KAQK+KD+EENE L E+LDK+FTSL+QSEALLSLT+P K+NAL ALVNK    E  +K
Sbjct: 188  FYKAQKAKDREENEHLVEELDKNFTSLVQSEALLSLTRPDKVNALKALVNKSIPNE-YMK 246

Query: 830  KAEMNLPPLNESSKQDKPDSYDKNVKQMSLEKRARPSDRTKTPXXXXXXXXXXXXXXXXX 1009
            K +++     +S KQ++PDSYDK + +M+L+ RARPSDRTKTP                 
Sbjct: 247  KDDVSAMQHIKSFKQEQPDSYDKIIGEMTLDMRARPSDRTKTPEEIAQEERERLERLEEE 306

Query: 1010 XXKRMHGNDDSSDEDGD 1060
              KRM   +DSSDE+GD
Sbjct: 307  RQKRMLAPNDSSDEEGD 323


>ref|XP_002316014.1| predicted protein [Populus trichocarpa] gi|222865054|gb|EEF02185.1|
            predicted protein [Populus trichocarpa]
          Length = 620

 Score =  300 bits (767), Expect = 5e-79
 Identities = 181/345 (52%), Positives = 223/345 (64%), Gaps = 27/345 (7%)
 Frame = +2

Query: 107  PNVMTMKTKSTSND---SNNPFETIWSRRKFDIIGKKRKGEQQRTGLARSRGIEKRKGTL 277
            PN + MK  + S D   S+NPFETIWSRRKFDI+GKKRKGE+ R GL+R R IEKRK TL
Sbjct: 29   PNSVAMKASAASKDNKNSSNPFETIWSRRKFDILGKKRKGEELRIGLSRCRAIEKRKKTL 88

Query: 278  LKEYEQSGKSSVFVDKRIGEQNESLGEFDKAILRSQRQRQ--NKKSKYNLSDGEDEYD-- 445
            LKEYE+SGKSSVF+DKRIGEQNE LGEFDKAI+RSQR+RQ  NKKSKYNLSDGE++ D  
Sbjct: 89   LKEYEESGKSSVFLDKRIGEQNEQLGEFDKAIIRSQRERQLKNKKSKYNLSDGEEDDDFA 148

Query: 446  -----EIDGVXXXXXXXXXXXXXXXXXXXXXXXQ-ALLKRVNDRNMHDPLETGLGEGRHK 607
                  + G                        + A+L+++N   +      G  E + K
Sbjct: 149  IPNLGPLSGQDDFEDEILSDDDGDDADADRTSKKPAILRQLNAHGLPQDAVHG-EENKPK 207

Query: 608  SKKEVMEELILKSKYFKAQKSKDKEENEELKEQLDKDFTSLLQSEALLSLTQPSKMNALN 787
            +KKEVM+E+ILKSK+FKAQK+KDKEENE+L E+LDK FTSL+QS+AL SLT+P KMNAL 
Sbjct: 208  TKKEVMQEVILKSKFFKAQKAKDKEENEQLMEELDKSFTSLVQSQALSSLTEPGKMNALK 267

Query: 788  ALVNKGDSKENLIKKAEMNLPPLNESSK-QDKPDSYDKNVKQMSLEKRARPSDRTKTP-- 958
            ALVNK    E+ +KK E+ +    E+ K Q++PDSYDK V +M+++ RARPSDRTKTP  
Sbjct: 268  ALVNKDIPNEH-VKKDELPVIQKPETFKQQEQPDSYDKLVYEMAIDSRARPSDRTKTPEE 326

Query: 959  -----------XXXXXXXXXXXXXXXXXXXKRMHGNDDSSDEDGD 1060
                                          KRM   DDSSDE+ D
Sbjct: 327  IAQKERERLEQLEASAWHYYHHYSDLEDRKKRMLVADDSSDEEND 371


>ref|XP_003535271.1| PREDICTED: nucleolar protein 14-like [Glycine max]
          Length = 919

 Score =  271 bits (693), Expect = 2e-70
 Identities = 162/330 (49%), Positives = 202/330 (61%), Gaps = 11/330 (3%)
 Frame = +2

Query: 104  GPNVMTMKTKSTSNDS---NNPFETIWSRRKFDIIGKKRKGEQQRTGLARSRGIEKRKGT 274
            GP  + MK K+ +N++   +NPFE+IWSRRKF+++G+KRKGE +R GLARS  I+KR  T
Sbjct: 29   GPEGVAMKVKANNNNNGTASNPFESIWSRRKFEVLGQKRKGEARRMGLARSLAIQKRNDT 88

Query: 275  LLKEYEQSGKSSVFVDKRIGEQNESLGEFDKAILRSQRQRQ-----NKKSKYNLSDGEDE 439
            LLKEY QS KSS+FVDKRIGE++E+L +F KAILRSQR+RQ     +KKSKY+LSDGE+ 
Sbjct: 89   LLKEYHQSAKSSLFVDKRIGEKDEALDDFGKAILRSQRERQLNMKLSKKSKYHLSDGEE- 147

Query: 440  YDEIDGVXXXXXXXXXXXXXXXXXXXXXXXQALLKRVNDRNMHDPLETGLGEG---RHKS 610
             D+ +G+                       +  L +   R+M  P E    +G   RHKS
Sbjct: 148  -DDFEGIDSLGRDDFEDEMLPDDVDAETDEKLNLVQ---RSMQIPGEISADDGEENRHKS 203

Query: 611  KKEVMEELILKSKYFKAQKSKDKEENEELKEQLDKDFTSLLQSEALLSLTQPSKMNALNA 790
            KKEVMEE+I KSK++KAQK+KDKEENE L E+LDKDFTSL+ SEALLSLT+P+KMN    
Sbjct: 204  KKEVMEEIISKSKFYKAQKAKDKEENENLVEELDKDFTSLVHSEALLSLTEPNKMN---- 259

Query: 791  LVNKGDSKENLIKKAEMNLPPLNESSKQDKPDSYDKNVKQMSLEKRARPSDRTKTPXXXX 970
                                        +KPD YDK VKQM LE RARPSDRTKTP    
Sbjct: 260  ----------------------------EKPDDYDKLVKQMGLEMRARPSDRTKTPEEIA 291

Query: 971  XXXXXXXXXXXXXXXKRMHGNDDSSDEDGD 1060
                           KRM   +DSSDED +
Sbjct: 292  QEEKERLEELEEERQKRMVAAEDSSDEDSE 321


>ref|XP_002464264.1| hypothetical protein SORBIDRAFT_01g015150 [Sorghum bicolor]
            gi|241918118|gb|EER91262.1| hypothetical protein
            SORBIDRAFT_01g015150 [Sorghum bicolor]
          Length = 925

 Score =  239 bits (611), Expect = 6e-61
 Identities = 143/325 (44%), Positives = 195/325 (60%), Gaps = 6/325 (1%)
 Frame = +2

Query: 104  GPNVMTMKTK-STSNDSNNPFETIWSRRKFDIIGKKRKGEQQRTGLARSRGIEKRKGTLL 280
            GP  + MK + + + + +NPFE IWSRRKFD++GKKRKGE++R   +RS  I KR+ TLL
Sbjct: 27   GPAKVAMKARGAAAEERSNPFEAIWSRRKFDVLGKKRKGEERRVSRSRSEAIRKRENTLL 86

Query: 281  KEYEQSGKSSVFVDKRIGEQNESLGEFDKAILRSQRQRQNK---KSKYNLSDGEDEYDEI 451
            KE+ +SGKSSVF D+RIGE++++L EFDKAILR QR+R  K   +SKYNLSD +++   +
Sbjct: 87   KEFMESGKSSVFHDRRIGERDDALPEFDKAILRQQRERLAKLKRESKYNLSDDDEDEINV 146

Query: 452  DGVXXXXXXXXXXXXXXXXXXXXXXXQALLKRVNDRNMHDPLETGLGEGRH--KSKKEVM 625
              +                           KR++ ++   P  T L +  H  KSKKEVM
Sbjct: 147  HNMLSEKDDFDEEVPLDDGSDEEGKMVLSKKRLSLQSDDHPSVTDLPQETHGQKSKKEVM 206

Query: 626  EELILKSKYFKAQKSKDKEENEELKEQLDKDFTSLLQSEALLSLTQPSKMNALNALVNKG 805
             E+I KSK++KAQ++K++EE+E L ++LD DF SL Q++ALLSLT  +K+      VNK 
Sbjct: 207  SEIISKSKFYKAQRAKEREEDEHLVDKLDSDFASLAQTQALLSLTDSAKVK-----VNKN 261

Query: 806  DSKENLIKKAEMNLPPLNESSKQDKPDSYDKNVKQMSLEKRARPSDRTKTPXXXXXXXXX 985
            DS   L  K   N         + K D+Y+K VK+M +++RARPSDRTKTP         
Sbjct: 262  DSSAGLTGKEIFN---------KLKADTYEKLVKEMVMDQRARPSDRTKTPEEIAQEEKE 312

Query: 986  XXXXXXXXXXKRMHGNDDSSDEDGD 1060
                      KRM G  DSSDED D
Sbjct: 313  RLEKLEEERQKRMLGTADSSDEDDD 337


>ref|XP_004165503.1| PREDICTED: nucleolar protein 14-like [Cucumis sativus]
          Length = 914

 Score =  239 bits (609), Expect = 1e-60
 Identities = 154/326 (47%), Positives = 183/326 (56%), Gaps = 7/326 (2%)
 Frame = +2

Query: 104  GPNVMTMKTKSTSNDSNNPFETIWSRRKFDIIGKKRKGEQQRTGLARSRGIEKRKGTLLK 283
            GP  +TMK    S    NPFE+IWS RKFD++GKKRKGE++R GLARS  IEKRK TLLK
Sbjct: 25   GPKALTMKV---SAPKANPFESIWSHRKFDVLGKKRKGEERRIGLARSLAIEKRKKTLLK 81

Query: 284  EYEQSGKSSVFVDKRIGEQNESLGEFDKAILRSQRQ---RQNKKSKYNLSDGEDEYDEID 454
            EYE+S KS+ F DKRIGE +E LGEFDKAILRSQR+   + +K SK+NLSDGE+  D+  
Sbjct: 82   EYERSRKSTEFSDKRIGEWDEELGEFDKAILRSQRELKRKLSKSSKFNLSDGEE--DDYF 139

Query: 455  GVXXXXXXXXXXXXXXXXXXXXXXXQALLKRVNDRNMHDPLETG-LGEG---RHKSKKEV 622
            G                        +A     N     D  + G L EG   + KSKKEV
Sbjct: 140  GTQNLGALPANDDFEDEIIPDDDEDEAAAAETNKGAYRDTQQKGRLLEGEDAKRKSKKEV 199

Query: 623  MEELILKSKYFKAQKSKDKEENEELKEQLDKDFTSLLQSEALLSLTQPSKMNALNALVNK 802
            MEE+I KSK+FKAQK+KDKEENE+L E+LDK F +L+QSEALLSLT     NAL ALV  
Sbjct: 200  MEEVIAKSKFFKAQKAKDKEENEQLVEELDKKFETLVQSEALLSLTGSGNSNALKALVQ- 258

Query: 803  GDSKENLIKKAEMNLPPLNESSKQDKPDSYDKNVKQMSLEKRARPSDRTKTPXXXXXXXX 982
                                              K M++E RARPSDRTKTP        
Sbjct: 259  ----------------------------------KSMAMEIRARPSDRTKTPEEIAQEER 284

Query: 983  XXXXXXXXXXXKRMHGNDDSSDEDGD 1060
                       KRM   D+SSDE+ D
Sbjct: 285  ERLEVLEEERQKRMLAPDNSSDEEDD 310


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