BLASTX nr result

ID: Coptis24_contig00017201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017201
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635410.1| PREDICTED: LOW QUALITY PROTEIN: patatin grou...   371   e-100
gb|AAF98369.1|AF158253_1 patatin-like protein 3 [Nicotiana tabacum]   369   e-100
emb|CBI25858.3| unnamed protein product [Vitis vinifera]              366   5e-99
ref|XP_002262942.1| PREDICTED: patatin group A-3-like [Vitis vin...   362   7e-98
emb|CAN62059.1| hypothetical protein VITISV_024099 [Vitis vinifera]   361   2e-97

>ref|XP_003635410.1| PREDICTED: LOW QUALITY PROTEIN: patatin group A-3-like [Vitis
            vinifera]
          Length = 388

 Score =  371 bits (953), Expect = e-100
 Identities = 182/321 (56%), Positives = 237/321 (73%), Gaps = 8/321 (2%)
 Frame = -1

Query: 1105 LPAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEIS-------TTGPKYDGKYLKTLLQNM 947
            L APN DNRP+YAAKDIN+FY+E  P IFPQN  +        TGPKYDGKYL++L   +
Sbjct: 67   LTAPNKDNRPIYAAKDINNFYLEHCPKIFPQNSTNPNTSVSGATGPKYDGKYLRSLTDEL 126

Query: 946  LGNSSIDQYLTNVIIPAFDVIYIQPTIFTNLEANFDVSRNTKLSDICLGTSAAPTYLPGH 767
            LG+ ++ Q LTNV+IP FD+  +QP IF+  +A  +V++N +LSDIC+GTSAAPTYLP H
Sbjct: 127  LGDLTLKQTLTNVVIPTFDIKLLQPIIFSTKDARTNVAKNARLSDICIGTSAAPTYLPAH 186

Query: 766  YFETKDSNGDIQTFNLVDGGVAASNPTLLAMSLVTEEI-MGQNPDFSHIKPMDCTRILII 590
            YFET+D++G  ++F+L+DGG AA+NPTL+ +S VT+EI +  N     I PMD  R+L++
Sbjct: 187  YFETRDASGKTRSFDLIDGGXAANNPTLMGISQVTKEIILMHNSQSEEINPMDPKRMLVL 246

Query: 589  SLGTGSAKWEARYSANMVSEWSTNDWLFSNGTTPLIDFYSNASADMVDIHTSVLFQSNNA 410
            SLGTG+ K E +Y+    S W   +WL  NG TPL+D Y +AS+DMVDIH S LFQS   
Sbjct: 247  SLGTGAPKLEEKYNGATASSWGPLEWLLDNGATPLLDIYGHASSDMVDIHVSTLFQSRRC 306

Query: 409  KANYLRIQIDTLTGDAATLDLATKENLQNLVKIGKDLLKAPVSRINLLTGKYEACRGEGT 230
            + NYLRIQ DTLTGDA+++D+AT ENL+ L +IGK+LL+ PVSR+NL TGKYE   GEGT
Sbjct: 307  QKNYLRIQDDTLTGDASSVDIATVENLERLEEIGKELLEKPVSRVNLETGKYEELVGEGT 366

Query: 229  NEEALAHFANLLSDERKLRRS 167
            N  AL  FA LLS +RKLR++
Sbjct: 367  NRGALTQFAMLLSHQRKLRQA 387


>gb|AAF98369.1|AF158253_1 patatin-like protein 3 [Nicotiana tabacum]
          Length = 411

 Score =  369 bits (947), Expect = e-100
 Identities = 177/323 (54%), Positives = 242/323 (74%), Gaps = 9/323 (2%)
 Frame = -1

Query: 1105 LPAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEISTT---------GPKYDGKYLKTLLQ 953
            L APN DNRPLY AKDI++FY+E  P IFPQ+  ++          GPKYDGKYL++++ 
Sbjct: 89   LTAPNKDNRPLYQAKDISNFYMEHGPQIFPQSRRNSFVRRVTNLFGGPKYDGKYLRSIIN 148

Query: 952  NMLGNSSIDQYLTNVIIPAFDVIYIQPTIFTNLEANFDVSRNTKLSDICLGTSAAPTYLP 773
            ++LGN ++ Q LTN IIP FD+  +QP IF+  +A  ++S+N +LSDICL TSAAPTY P
Sbjct: 149  SILGNLTMKQTLTNTIIPTFDIKRLQPIIFSTADAKANISKNAQLSDICLSTSAAPTYFP 208

Query: 772  GHYFETKDSNGDIQTFNLVDGGVAASNPTLLAMSLVTEEIMGQNPDFSHIKPMDCTRILI 593
             HYFETKD+ G  +TF+LVDGG+AA+NPTL+AM+ ++++IM  N  +  ++ MDC ++L+
Sbjct: 209  VHYFETKDAEGKTRTFDLVDGGLAANNPTLMAMTHISKQIMTGNFQYEDMEKMDCKKVLV 268

Query: 592  ISLGTGSAKWEARYSANMVSEWSTNDWLFSNGTTPLIDFYSNASADMVDIHTSVLFQSNN 413
            +SLGTG+ K E +Y+A + S W    W+++NG TPLID Y++ASADMVDIH S +FQ+  
Sbjct: 269  LSLGTGTGKHEEKYNATIASRWGMLGWIYNNGATPLIDVYADASADMVDIHVSTMFQTLA 328

Query: 412  AKANYLRIQIDTLTGDAATLDLATKENLQNLVKIGKDLLKAPVSRINLLTGKYEACRGEG 233
            ++ NY+RIQ D LTG+AA++D+AT EN+  LV+IG DLLK PVSR+NL TG+YE    EG
Sbjct: 329  SEKNYIRIQDDNLTGEAASMDIATIENMGRLVQIGNDLLKKPVSRVNLETGRYEPVVAEG 388

Query: 232  TNEEALAHFANLLSDERKLRRSN 164
            TNE A+  FA LLS+ERKLR +N
Sbjct: 389  TNEAAIIRFAQLLSEERKLRLNN 411


>emb|CBI25858.3| unnamed protein product [Vitis vinifera]
          Length = 378

 Score =  366 bits (940), Expect = 5e-99
 Identities = 177/318 (55%), Positives = 237/318 (74%), Gaps = 6/318 (1%)
 Frame = -1

Query: 1105 LPAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEI------STTGPKYDGKYLKTLLQNML 944
            L APN DNRP++AAKDIN FY++  P IFPQN        +  GPKY+GKYL++L  ++L
Sbjct: 58   LTAPNKDNRPVFAAKDINSFYLDHCPEIFPQNSRFGSLIDAVRGPKYNGKYLQSLAVDLL 117

Query: 943  GNSSIDQYLTNVIIPAFDVIYIQPTIFTNLEANFDVSRNTKLSDICLGTSAAPTYLPGHY 764
                + Q LTNV+IP FD+  +QP IF+  EA  +V++N +LSDIC+ TSAAPTYLP HY
Sbjct: 118  DKVYLKQTLTNVVIPTFDIKLLQPVIFSTDEAKVNVAKNARLSDICISTSAAPTYLPAHY 177

Query: 763  FETKDSNGDIQTFNLVDGGVAASNPTLLAMSLVTEEIMGQNPDFSHIKPMDCTRILIISL 584
            FETK++NG  ++FNL+DGGVAA+NPTL+AMS +++EI+  N  F  +KPMD   +L++SL
Sbjct: 178  FETKEANGKTRSFNLIDGGVAANNPTLVAMSHISKEILMDNTQFIEMKPMDSKSMLVLSL 237

Query: 583  GTGSAKWEARYSANMVSEWSTNDWLFSNGTTPLIDFYSNASADMVDIHTSVLFQSNNAKA 404
            GTG+ K E +YSA   S W  + W ++NG TPL+D +S+AS+DMVDIH S +FQS   + 
Sbjct: 238  GTGAPKHEEKYSAAEASRWGLHRWAYNNGATPLLDIFSHASSDMVDIHVSTVFQSLGCEK 297

Query: 403  NYLRIQIDTLTGDAATLDLATKENLQNLVKIGKDLLKAPVSRINLLTGKYEACRGEGTNE 224
            NYLRIQ DTLTG+ +++D+AT ENLQ L +IGK+LL  P+SR+NL TG++E   GEGTN+
Sbjct: 298  NYLRIQDDTLTGEESSVDVATTENLQRLGEIGKELLAKPLSRVNLETGRHEQLEGEGTNQ 357

Query: 223  EALAHFANLLSDERKLRR 170
            EAL  FA LLS+ERK R+
Sbjct: 358  EALTQFAKLLSEERKFRQ 375


>ref|XP_002262942.1| PREDICTED: patatin group A-3-like [Vitis vinifera]
          Length = 397

 Score =  362 bits (930), Expect = 7e-98
 Identities = 177/328 (53%), Positives = 237/328 (72%), Gaps = 16/328 (4%)
 Frame = -1

Query: 1105 LPAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEI----------------STTGPKYDGK 974
            L APN DNRP++AAKDIN FY++  P IFPQN                  +  GPKY+GK
Sbjct: 67   LTAPNKDNRPVFAAKDINSFYLDHCPEIFPQNRRISFGKSTISRFGSLIDAVRGPKYNGK 126

Query: 973  YLKTLLQNMLGNSSIDQYLTNVIIPAFDVIYIQPTIFTNLEANFDVSRNTKLSDICLGTS 794
            YL++L  ++L    + Q LTNV+IP FD+  +QP IF+  EA  +V++N +LSDIC+ TS
Sbjct: 127  YLQSLAVDLLDKVYLKQTLTNVVIPTFDIKLLQPVIFSTDEAKVNVAKNARLSDICISTS 186

Query: 793  AAPTYLPGHYFETKDSNGDIQTFNLVDGGVAASNPTLLAMSLVTEEIMGQNPDFSHIKPM 614
            AAPTYLP HYFETK++NG  ++FNL+DGGVAA+NPTL+AMS +++EI+  N  F  +KPM
Sbjct: 187  AAPTYLPAHYFETKEANGKTRSFNLIDGGVAANNPTLVAMSHISKEILMDNTQFIEMKPM 246

Query: 613  DCTRILIISLGTGSAKWEARYSANMVSEWSTNDWLFSNGTTPLIDFYSNASADMVDIHTS 434
            D   +L++SLGTG+ K E +YSA   S W  + W ++NG TPL+D +S+AS+DMVDIH S
Sbjct: 247  DSKSMLVLSLGTGAPKHEEKYSAAEASRWGLHRWAYNNGATPLLDIFSHASSDMVDIHVS 306

Query: 433  VLFQSNNAKANYLRIQIDTLTGDAATLDLATKENLQNLVKIGKDLLKAPVSRINLLTGKY 254
             +FQS   + NYLRIQ DTLTG+ +++D+AT ENLQ L +IGK+LL  P+SR+NL TG++
Sbjct: 307  TVFQSLGCEKNYLRIQDDTLTGEESSVDVATTENLQRLGEIGKELLAKPLSRVNLETGRH 366

Query: 253  EACRGEGTNEEALAHFANLLSDERKLRR 170
            E   GEGTN+EAL  FA LLS+ERK R+
Sbjct: 367  EQLEGEGTNQEALTQFAKLLSEERKFRQ 394


>emb|CAN62059.1| hypothetical protein VITISV_024099 [Vitis vinifera]
          Length = 397

 Score =  361 bits (926), Expect = 2e-97
 Identities = 177/328 (53%), Positives = 235/328 (71%), Gaps = 16/328 (4%)
 Frame = -1

Query: 1105 LPAPNNDNRPLYAAKDINDFYVEQAPLIFPQNEI----------------STTGPKYDGK 974
            L APN DNRP +AAKDIN FY++  P IFPQN                  +  GPKY+GK
Sbjct: 67   LTAPNKDNRPXFAAKDINSFYLDHCPEIFPQNRRISFGKSTISRFGSLIDAVRGPKYNGK 126

Query: 973  YLKTLLQNMLGNSSIDQYLTNVIIPAFDVIYIQPTIFTNLEANFDVSRNTKLSDICLGTS 794
            YL++L  ++L    + Q LTNV+IP FD+  +QP IF   EA  +V++N +LSDIC+ TS
Sbjct: 127  YLQSLAVDLLDKVYLKQTLTNVVIPTFDIKLLQPVIFXTDEAKVNVAKNARLSDICISTS 186

Query: 793  AAPTYLPGHYFETKDSNGDIQTFNLVDGGVAASNPTLLAMSLVTEEIMGQNPDFSHIKPM 614
            AAPTYLP HYFETK++NG  ++FNL+DGGVAA+NPTL+AMS +++EI+  N  F  +KPM
Sbjct: 187  AAPTYLPAHYFETKEANGKTRSFNLIDGGVAANNPTLVAMSHISKEILMDNTQFIEMKPM 246

Query: 613  DCTRILIISLGTGSAKWEARYSANMVSEWSTNDWLFSNGTTPLIDFYSNASADMVDIHTS 434
            D   +L++SLGTG+ K E +YSA   S W  + W ++NG TPL+D +S+AS+DMVDIH S
Sbjct: 247  DSKSMLVLSLGTGAPKHEEKYSAAEASRWGLHRWAYNNGATPLLDIFSHASSDMVDIHVS 306

Query: 433  VLFQSNNAKANYLRIQIDTLTGDAATLDLATKENLQNLVKIGKDLLKAPVSRINLLTGKY 254
             +FQS   + NYLRIQ DTLTG+ +++D+AT ENLQ L +IGK+LL  P+SR+NL TG++
Sbjct: 307  TVFQSLGCEKNYLRIQDDTLTGEESSVDVATTENLQRLGEIGKELLXKPLSRVNLETGRH 366

Query: 253  EACRGEGTNEEALAHFANLLSDERKLRR 170
            E   GEGTN+EAL  FA LLS+ERK R+
Sbjct: 367  EQLEGEGTNQEALTQFAKLLSEERKFRQ 394


Top