BLASTX nr result

ID: Coptis24_contig00017187 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017187
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28136.3| unnamed protein product [Vitis vinifera]              161   7e-38
emb|CAN83719.1| hypothetical protein VITISV_017077 [Vitis vinifera]   161   7e-38
ref|XP_002529346.1| conserved hypothetical protein [Ricinus comm...   152   3e-35
ref|XP_002324957.1| predicted protein [Populus trichocarpa] gi|2...   150   2e-34
ref|XP_003525655.1| PREDICTED: uncharacterized protein LOC100807...   142   5e-32

>emb|CBI28136.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  161 bits (408), Expect = 7e-38
 Identities = 86/146 (58%), Positives = 95/146 (65%), Gaps = 2/146 (1%)
 Frame = -3

Query: 607 SPSHQAGGTQAPQLVV--LGSIWVPPEYXXXXXXXXXGPTIYGAHPASLASTHFCAPPVP 434
           SPS QA G  APQLVV  LG IWVPPEY           T+YGAHP S  S H+C PPVP
Sbjct: 255 SPSPQATGAAAPQLVVVGLGGIWVPPEYATAAHTGGT--TLYGAHPPSHTSPHYCGPPVP 312

Query: 433 QDFYPGPSXXXXXXXXXXXXXXXXHAYKVSSQTHGSSESDTRGAGDRSESIEDGKSESGS 254
           QDFY  P+                  YK S QT  S +SD RGAGDRSESIEDGKSES S
Sbjct: 313 QDFYAAPAQPHHHSLHHQLHM-----YKASPQTQSSPDSDMRGAGDRSESIEDGKSESSS 367

Query: 253 WKGDSGENGGERRGLASLRDEGEKSN 176
           WKG+SGENGGER+GL +LRD+GE+SN
Sbjct: 368 WKGESGENGGERKGLVTLRDDGEESN 393


>emb|CAN83719.1| hypothetical protein VITISV_017077 [Vitis vinifera]
          Length = 444

 Score =  161 bits (408), Expect = 7e-38
 Identities = 87/146 (59%), Positives = 96/146 (65%), Gaps = 2/146 (1%)
 Frame = -3

Query: 607 SPSHQAGGTQAPQLVV--LGSIWVPPEYXXXXXXXXXGPTIYGAHPASLASTHFCAPPVP 434
           SPS QA G  APQLVV  LG IWVPPEY           T+YGAHP S  S H+C PPVP
Sbjct: 293 SPSPQATGAAAPQLVVVGLGGIWVPPEYATAAHTGGX--TLYGAHPPSHTSPHYCGPPVP 350

Query: 433 QDFYPGPSXXXXXXXXXXXXXXXXHAYKVSSQTHGSSESDTRGAGDRSESIEDGKSESGS 254
           QDFY  P+                  YK S QT  S +SD RGAGDRSESIEDGKSES S
Sbjct: 351 QDFYAAPAQPHHHSLHHQLHM-----YKASPQTQSSPDSDMRGAGDRSESIEDGKSESSS 405

Query: 253 WKGDSGENGGERRGLASLRDEGEKSN 176
           WKG+SGENGGER+GL +LRD+GE+SN
Sbjct: 406 WKGESGENGGERKGLVTLRDDGEESN 431


>ref|XP_002529346.1| conserved hypothetical protein [Ricinus communis]
           gi|223531166|gb|EEF33013.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 474

 Score =  152 bits (385), Expect = 3e-35
 Identities = 89/166 (53%), Positives = 100/166 (60%), Gaps = 14/166 (8%)
 Frame = -3

Query: 607 SPSHQAGGTQAPQLVVLGSIWVPPEYXXXXXXXXXGPTIYGA--HPASLA-STHFC-APP 440
           SPS QA G   PQLVVLG IWVPPEY          PT+YG   HP S A   HFC APP
Sbjct: 311 SPSPQAPGAPTPQLVVLGGIWVPPEY--ATAAHGGTPTLYGTHHHPVSHAPPPHFCAAPP 368

Query: 439 VPQDFYPGPSXXXXXXXXXXXXXXXXHAY----------KVSSQTHGSSESDTRGAGDRS 290
           VPQDFY   +                H +          K +SQ H S ESD RG GDRS
Sbjct: 369 VPQDFYTAAAAAGATTPPLPPPHHQLHHHTLHHQLHMYNKATSQAHSSPESDIRGTGDRS 428

Query: 289 ESIEDGKSESGSWKGDSGENGGERRGLASLRDEGEKSNDNEITLNF 152
           ESIEDGKSES SWK +SGENGGER+GLA+ R++GE+SN +EITL F
Sbjct: 429 ESIEDGKSESSSWKAESGENGGERKGLAAFREDGEESNGSEITLKF 474


>ref|XP_002324957.1| predicted protein [Populus trichocarpa] gi|222866391|gb|EEF03522.1|
           predicted protein [Populus trichocarpa]
          Length = 463

 Score =  150 bits (379), Expect = 2e-34
 Identities = 89/156 (57%), Positives = 99/156 (63%), Gaps = 4/156 (2%)
 Frame = -3

Query: 607 SPSHQAGGTQAPQLVVLGSIWVPPEYXXXXXXXXXG-PTIYGAHPASLAST-HFCA-PPV 437
           SPS QA G   PQLVVLG IWVPPEY         G PT+YGAH AS A   HFCA PPV
Sbjct: 309 SPSPQAAGAPPPQLVVLGGIWVPPEYATAAAAAHSGGPTLYGAHQASHAPPPHFCAAPPV 368

Query: 436 PQDFYPGPSXXXXXXXXXXXXXXXXHAYKVSSQTHGSSESDTRGAGDRSESIEDGKSESG 257
            QDFY   +                  YK ++Q H S ESD RG   RSESIEDGKSES 
Sbjct: 369 SQDFYTAAATPPPPLHHHTLYHQLHL-YKPTAQAHSSPESDVRGTRGRSESIEDGKSESS 427

Query: 256 SWKGDSGEN-GGERRGLASLRDEGEKSNDNEITLNF 152
           SWKG+SGEN GGERRGLA+LR++ E+SN +EITL F
Sbjct: 428 SWKGESGENDGGERRGLAALREDCEESNGSEITLKF 463


>ref|XP_003525655.1| PREDICTED: uncharacterized protein LOC100807925 [Glycine max]
          Length = 454

 Score =  142 bits (358), Expect = 5e-32
 Identities = 85/156 (54%), Positives = 95/156 (60%), Gaps = 4/156 (2%)
 Frame = -3

Query: 607 SPSHQAGGTQAPQLVVLGSIWVPPEYXXXXXXXXXGPTIYGAHPASLAST-HFCAP-PVP 434
           SPS QAG   APQLVVLG IWVPPEY          PT+YGAHP S A   H+CA  P+P
Sbjct: 308 SPSPQAGAA-APQLVVLGGIWVPPEYATAAHTAT--PTLYGAHPTSHAPPPHYCAATPMP 364

Query: 433 QDFYPG--PSXXXXXXXXXXXXXXXXHAYKVSSQTHGSSESDTRGAGDRSESIEDGKSES 260
           QDFY    P                 H YK +S  HGS ESD  G G+RSESIEDGKSES
Sbjct: 365 QDFYTAAPPQPLLPPPPQHHNALHHLHMYKAASHGHGSPESDVPGGGERSESIEDGKSES 424

Query: 259 GSWKGDSGENGGERRGLASLRDEGEKSNDNEITLNF 152
            SWKG+SGEN GER+G+      GE+SN +EITL F
Sbjct: 425 SSWKGESGENEGERKGI------GEESNGSEITLKF 454


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