BLASTX nr result

ID: Coptis24_contig00017182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017182
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273563.1| PREDICTED: uncharacterized RNA methyltransfe...   323   1e-86
emb|CAN82187.1| hypothetical protein VITISV_031112 [Vitis vinifera]   316   1e-84
ref|XP_004168694.1| PREDICTED: uncharacterized RNA methyltransfe...   309   1e-82
ref|XP_004145672.1| PREDICTED: uncharacterized RNA methyltransfe...   309   1e-82
ref|XP_002509532.1| conserved hypothetical protein [Ricinus comm...   306   9e-82

>ref|XP_002273563.1| PREDICTED: uncharacterized RNA methyltransferase pc1998 [Vitis
           vinifera] gi|296082357|emb|CBI21362.3| unnamed protein
           product [Vitis vinifera]
          Length = 497

 Score =  323 bits (828), Expect = 1e-86
 Identities = 151/175 (86%), Positives = 163/175 (93%)
 Frame = +2

Query: 2   LANFLWRNGGPRSSFHIVHSVWVNFQTSSNNIIFGNRWRHLLGERDFWEHVGGIDISLAP 181
           LANFLWRNGGPRS+ H++HSVW NFQTS+NNIIFGNRWRHLLGE DFWEHVGGIDI+LAP
Sbjct: 200 LANFLWRNGGPRSNVHLIHSVWANFQTSTNNIIFGNRWRHLLGEIDFWEHVGGIDIALAP 259

Query: 182 SSFGQANTRAFDSLLRKLQTYVPYGATVTDLYAGAGVIGLSLAVARKCRSVKCVEINKES 361
           SSFGQANTRAFDSLLRKLQ YVPYGA V DLYAGAGVIGLSLA  RKCRSVKC+EINKE+
Sbjct: 260 SSFGQANTRAFDSLLRKLQKYVPYGAAVADLYAGAGVIGLSLAATRKCRSVKCIEINKEA 319

Query: 362 KLSFEKTVSRLPKSVDSSISWHQADTSIEPLSWLAGSDVVVVDPPRKGLDPSLID 526
           +LSFEKTV RLPKS+D++ISWH ADTSI PLSWL GSDVVVVDPPRKGLDPSL+D
Sbjct: 320 RLSFEKTVGRLPKSIDTTISWHHADTSIGPLSWLMGSDVVVVDPPRKGLDPSLVD 374


>emb|CAN82187.1| hypothetical protein VITISV_031112 [Vitis vinifera]
          Length = 480

 Score =  316 bits (810), Expect = 1e-84
 Identities = 151/180 (83%), Positives = 162/180 (90%), Gaps = 5/180 (2%)
 Frame = +2

Query: 2   LANFLWRNGGPRSSFHIVHSVWVNFQTSSNNIIFGNRWRHLLGERDFWEHVGGIDISLAP 181
           LANFLWRNGGPRS+ H++HSVW NFQTS+NNIIFGNRWRHLLGE DFWEHVGGIDI+LAP
Sbjct: 160 LANFLWRNGGPRSNVHLIHSVWANFQTSTNNIIFGNRWRHLLGEIDFWEHVGGIDIALAP 219

Query: 182 SSFGQANTRAFDSLLRKLQTYVPYGATVTDLYAGAGVIGLSLAVARKCR-----SVKCVE 346
           SSFGQANTRAFDSLLRKLQ YVPYGA V DLYAGAGVIGLSLA  RKCR     SVKC+E
Sbjct: 220 SSFGQANTRAFDSLLRKLQKYVPYGAAVADLYAGAGVIGLSLAATRKCRQELRWSVKCIE 279

Query: 347 INKESKLSFEKTVSRLPKSVDSSISWHQADTSIEPLSWLAGSDVVVVDPPRKGLDPSLID 526
           INKE++LSFEKTV RLPKS+D +ISWH ADTSI PLSWL GSDVVVVDPPRKGLDPSL+D
Sbjct: 280 INKEARLSFEKTVGRLPKSIDXTISWHHADTSIGPLSWLXGSDVVVVDPPRKGLDPSLVD 339


>ref|XP_004168694.1| PREDICTED: uncharacterized RNA methyltransferase pc1998-like,
           partial [Cucumis sativus]
          Length = 414

 Score =  309 bits (792), Expect = 1e-82
 Identities = 147/173 (84%), Positives = 157/173 (90%)
 Frame = +2

Query: 2   LANFLWRNGGPRSSFHIVHSVWVNFQTSSNNIIFGNRWRHLLGERDFWEHVGGIDISLAP 181
           LANFLW+NGG RS+ H+VHSVW NFQTS+NN+IFGNRWRHLLGERDFWEHVGGIDI L P
Sbjct: 116 LANFLWKNGGVRSNTHLVHSVWANFQTSTNNVIFGNRWRHLLGERDFWEHVGGIDICLTP 175

Query: 182 SSFGQANTRAFDSLLRKLQTYVPYGATVTDLYAGAGVIGLSLAVARKCRSVKCVEINKES 361
           SSFGQANT+AFDSLLRKLQ YVPYGA+V DLYAGAGVIGLSLA  RKCRSVKCVE+NKES
Sbjct: 176 SSFGQANTQAFDSLLRKLQKYVPYGASVADLYAGAGVIGLSLAATRKCRSVKCVEVNKES 235

Query: 362 KLSFEKTVSRLPKSVDSSISWHQADTSIEPLSWLAGSDVVVVDPPRKGLDPSL 520
           KLSFEKTV RLP  V+SSISWH ADTS EPLSW+ GSDVVVVDPPRKGLD SL
Sbjct: 236 KLSFEKTVERLPDRVNSSISWHHADTSKEPLSWIMGSDVVVVDPPRKGLDASL 288


>ref|XP_004145672.1| PREDICTED: uncharacterized RNA methyltransferase pc1998-like
           [Cucumis sativus]
          Length = 519

 Score =  309 bits (792), Expect = 1e-82
 Identities = 147/173 (84%), Positives = 157/173 (90%)
 Frame = +2

Query: 2   LANFLWRNGGPRSSFHIVHSVWVNFQTSSNNIIFGNRWRHLLGERDFWEHVGGIDISLAP 181
           LANFLW+NGG RS+ H+VHSVW NFQTS+NN+IFGNRWRHLLGERDFWEHVGGIDI L P
Sbjct: 221 LANFLWKNGGVRSNTHLVHSVWANFQTSTNNVIFGNRWRHLLGERDFWEHVGGIDICLTP 280

Query: 182 SSFGQANTRAFDSLLRKLQTYVPYGATVTDLYAGAGVIGLSLAVARKCRSVKCVEINKES 361
           SSFGQANT+AFDSLLRKLQ YVPYGA+V DLYAGAGVIGLSLA  RKCRSVKCVE+NKES
Sbjct: 281 SSFGQANTQAFDSLLRKLQKYVPYGASVADLYAGAGVIGLSLAATRKCRSVKCVEVNKES 340

Query: 362 KLSFEKTVSRLPKSVDSSISWHQADTSIEPLSWLAGSDVVVVDPPRKGLDPSL 520
           KLSFEKTV RLP  V+SSISWH ADTS EPLSW+ GSDVVVVDPPRKGLD SL
Sbjct: 341 KLSFEKTVERLPDRVNSSISWHHADTSKEPLSWIMGSDVVVVDPPRKGLDASL 393


>ref|XP_002509532.1| conserved hypothetical protein [Ricinus communis]
           gi|223549431|gb|EEF50919.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 518

 Score =  306 bits (785), Expect = 9e-82
 Identities = 140/175 (80%), Positives = 161/175 (92%)
 Frame = +2

Query: 2   LANFLWRNGGPRSSFHIVHSVWVNFQTSSNNIIFGNRWRHLLGERDFWEHVGGIDISLAP 181
           LAN+LWRNGGPR++   +HS+W NFQTS+NNIIFGNRWRHLLG++DFWE VGGID+SLAP
Sbjct: 217 LANYLWRNGGPRTAVRFIHSIWANFQTSTNNIIFGNRWRHLLGDQDFWERVGGIDMSLAP 276

Query: 182 SSFGQANTRAFDSLLRKLQTYVPYGATVTDLYAGAGVIGLSLAVARKCRSVKCVEINKES 361
           SSFGQANTRAFD+LLRKLQ YVP GA+V DLYAGAGVIGLSLA +RKCRSVKC+E+NK+S
Sbjct: 277 SSFGQANTRAFDALLRKLQKYVPLGASVADLYAGAGVIGLSLAASRKCRSVKCIEVNKQS 336

Query: 362 KLSFEKTVSRLPKSVDSSISWHQADTSIEPLSWLAGSDVVVVDPPRKGLDPSLID 526
           K+SFEK   RLPKSVDSSISW+QADTS+EPLSWL GS+VV+VDPPRKGLD SL+D
Sbjct: 337 KISFEKAAERLPKSVDSSISWYQADTSVEPLSWLMGSEVVIVDPPRKGLDASLVD 391


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