BLASTX nr result

ID: Coptis24_contig00017168 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017168
         (1347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28253.3| unnamed protein product [Vitis vinifera]               77   1e-11
emb|CAN77039.1| hypothetical protein VITISV_036000 [Vitis vinifera]    65   5e-08

>emb|CBI28253.3| unnamed protein product [Vitis vinifera]
          Length = 522

 Score = 76.6 bits (187), Expect = 1e-11
 Identities = 89/335 (26%), Positives = 130/335 (38%), Gaps = 21/335 (6%)
 Frame = -1

Query: 1119 LPEFDFGNSCAVSQHGVSKSPVPSSSTHVSNAVPLEMKVSAEG--------------VQP 982
            LPEFDF  +C  SQ    KS          +A+ LE ++  EG              +Q 
Sbjct: 266  LPEFDFRTACGASQTPTGKS---------FDAMALERRLPPEGFRKMDVSVPLVIPNLQS 316

Query: 981  MGIANQQRSQAMTFSVVSGASPSKGFGEGLSLRPALSYSDEKLLAQ---GKEPSVQP-VV 814
            M I NQ+ S+ ++F  +   +      +G+ L   + + D ++  Q   G+  SVQ    
Sbjct: 317  MPILNQKSSENLSFPRLQTDAD-----QGMPLPKNVCHRDFQIPVQPILGERYSVQGRAT 371

Query: 813  GNPAPSIALPAPNNLWDDGDD---MPEWCPPNLCHQSRPATMSTTRPSIPCTPSSVINPK 643
             +PA +  + +  N +DD DD   MPEW PPNL    +P    TT+PS    PS V N +
Sbjct: 372  LSPANATTITSSKNRFDDDDDDDDMPEWYPPNLQVHKQPVA-ETTQPSTTAFPSMVPNSR 430

Query: 642  SENKLPGQXXXXXXXXXAVPYISPPVFNHNSGYIRPGLPPRMATTRPSFTYMLSPVPRKL 463
             EN                                  LPP +   RP+   + SP+    
Sbjct: 431  FEN----------------------------------LPPSL--PRPT---LFSPITAS- 450

Query: 462  EHMXXXXXXXXXXXXXXXXLVFVRPQFQNQGLSHGYQSSKIISTKPAQIGSVDGLAHVGL 283
             H+                     P   +    HG  ++ +    PAQ+G V+G    G 
Sbjct: 451  SHLPF-------------------PSLSHPRAFHGPIATTL---NPAQLGPVNGYIQRGP 488

Query: 282  RSSMGFTSNSNLRPQVNRFDMKPPIRPAGWSGWRP 178
                GF S+  LRP  N   +K PI P    GW+P
Sbjct: 489  NPMRGFNSSPVLRPPTNP-HVKLPIHPTNKRGWKP 522


>emb|CAN77039.1| hypothetical protein VITISV_036000 [Vitis vinifera]
          Length = 751

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 58/186 (31%), Positives = 84/186 (45%), Gaps = 21/186 (11%)
 Frame = -1

Query: 1119 LPEFDFGNSCAVSQHGVSKSPVPSSSTHVSNAVPLEMKVSAEG--------------VQP 982
            LPEFDF  +C  SQ    KS          +A+ LE ++  EG              +Q 
Sbjct: 306  LPEFDFRTACGASQTPTGKS---------FDAMALERRLPPEGFRKMDVSVPLVIPNLQS 356

Query: 981  MGIANQQRSQAMTFSVVSGASPSKGFGEGLSLRPALSYSDEKLLAQ---GKEPSVQP-VV 814
            M I NQ+ S+ ++F  +   +      +G+ L   + + D ++  Q   GK  SVQ    
Sbjct: 357  MPILNQKSSENLSFPRLQTDAD-----QGMPLPKNVCHRDFQIPVQPILGKRYSVQGRAT 411

Query: 813  GNPAPSIALPAPNNLWDDGDD---MPEWCPPNLCHQSRPATMSTTRPSIPCTPSSVINPK 643
             +PA +  + +  N +DD DD   MPEW PPNL    +P    TT+ S    PS V N +
Sbjct: 412  LSPANATTITSSKNRFDDDDDDDDMPEWYPPNLQVHKQPVA-ETTQXSTTAFPSMVPNSR 470

Query: 642  SENKLP 625
             EN  P
Sbjct: 471  FENLPP 476


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