BLASTX nr result

ID: Coptis24_contig00017162 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017162
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20978.3| unnamed protein product [Vitis vinifera]              103   2e-20
emb|CAN80954.1| hypothetical protein VITISV_032205 [Vitis vinifera]   103   2e-20
gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida]     102   2e-20
gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axill...   102   2e-20
gb|AEO22189.1| ABCG subfamily transporter protein [Solanum tuber...   102   2e-20

>emb|CBI20978.3| unnamed protein product [Vitis vinifera]
          Length = 1436

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/63 (82%), Positives = 59/63 (93%)
 Frame = +3

Query: 90  VWTAKALFMDEISTGLDSSTTFQIVNALRQTIHILQGTAVISLLQPALETYDLFYEIILI 269
           V  AKALFMDEISTGLDSSTTFQIVN++RQ+IHIL+GTA+ISLLQPA ETYDLF +IIL+
Sbjct: 338 VGPAKALFMDEISTGLDSSTTFQIVNSIRQSIHILKGTAIISLLQPAPETYDLFDDIILL 397

Query: 270 SDG 278
           SDG
Sbjct: 398 SDG 400


>emb|CAN80954.1| hypothetical protein VITISV_032205 [Vitis vinifera]
          Length = 1441

 Score =  103 bits (256), Expect = 2e-20
 Identities = 52/63 (82%), Positives = 59/63 (93%)
 Frame = +3

Query: 90  VWTAKALFMDEISTGLDSSTTFQIVNALRQTIHILQGTAVISLLQPALETYDLFYEIILI 269
           V  AKALFMDEISTGLDSSTTFQIVN++RQ+IHIL+GTA+ISLLQPA ETYDLF +IIL+
Sbjct: 338 VGPAKALFMDEISTGLDSSTTFQIVNSIRQSIHILKGTAIISLLQPAPETYDLFDDIILL 397

Query: 270 SDG 278
           SDG
Sbjct: 398 SDG 400


>gb|AFA43816.1| ABCG/PDR subfamily ABC protein [Petunia x hybrida]
          Length = 1452

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/63 (82%), Positives = 59/63 (93%)
 Frame = +3

Query: 90  VWTAKALFMDEISTGLDSSTTFQIVNALRQTIHILQGTAVISLLQPALETYDLFYEIILI 269
           V  A+ALFMDEISTGLDSSTT+QIVN++RQ+IHILQGTAVISLLQPA ETYDLF +IIL+
Sbjct: 339 VGPARALFMDEISTGLDSSTTYQIVNSIRQSIHILQGTAVISLLQPAPETYDLFDDIILL 398

Query: 270 SDG 278
           SDG
Sbjct: 399 SDG 401


>gb|AFA43815.1| ABCG/PDR subfamily ABC transporter [Petunia axillaris]
          Length = 1452

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/63 (82%), Positives = 59/63 (93%)
 Frame = +3

Query: 90  VWTAKALFMDEISTGLDSSTTFQIVNALRQTIHILQGTAVISLLQPALETYDLFYEIILI 269
           V  A+ALFMDEISTGLDSSTT+QIVN++RQ+IHILQGTAVISLLQPA ETYDLF +IIL+
Sbjct: 339 VGPARALFMDEISTGLDSSTTYQIVNSIRQSIHILQGTAVISLLQPAPETYDLFDDIILL 398

Query: 270 SDG 278
           SDG
Sbjct: 399 SDG 401


>gb|AEO22189.1| ABCG subfamily transporter protein [Solanum tuberosum]
          Length = 1423

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/63 (82%), Positives = 59/63 (93%)
 Frame = +3

Query: 90  VWTAKALFMDEISTGLDSSTTFQIVNALRQTIHILQGTAVISLLQPALETYDLFYEIILI 269
           V  A+ALFMDEISTGLDSSTT+QIVN++RQ+IHILQGTAVISLLQPA ETYDLF +IIL+
Sbjct: 493 VGPARALFMDEISTGLDSSTTYQIVNSIRQSIHILQGTAVISLLQPAPETYDLFDDIILL 552

Query: 270 SDG 278
           SDG
Sbjct: 553 SDG 555


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