BLASTX nr result

ID: Coptis24_contig00017158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017158
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299379.1| predicted protein [Populus trichocarpa] gi|2...   370   e-100
ref|XP_002534164.1| minichromosome maintenance protein, putative...   365   6e-99
ref|XP_004134510.1| PREDICTED: DNA replication licensing factor ...   351   1e-94
emb|CAN77381.1| hypothetical protein VITISV_029723 [Vitis vinifera]   350   3e-94
ref|XP_003546381.1| PREDICTED: maternal DNA replication licensin...   344   1e-92

>ref|XP_002299379.1| predicted protein [Populus trichocarpa] gi|222846637|gb|EEE84184.1|
            predicted protein [Populus trichocarpa]
          Length = 842

 Score =  370 bits (949), Expect = e-100
 Identities = 198/273 (72%), Positives = 215/273 (78%), Gaps = 6/273 (2%)
 Frame = +2

Query: 2    KYNVALPPAILSRFDLVYVMIDEPDDQTDYHIAHHIVRVHQKHEEALSPAFTTTQLKRYI 181
            KYNVALPPAILSRFDLVYVMID+PDDQTDYHIAHHIVRVHQK EEALSPAFTT Q+KRYI
Sbjct: 519  KYNVALPPAILSRFDLVYVMIDDPDDQTDYHIAHHIVRVHQKREEALSPAFTTAQIKRYI 578

Query: 182  AYAKTLKPKLSQEARKLLVDSYVALRRGDTAPGSRTAYRMTVRQLEALIRLSEAIARSHL 361
             YAKTLKPKL+ EARKLLVDSYVALR+GDT PGSR AYRMTVRQLEALIRLSEAIARSHL
Sbjct: 579  TYAKTLKPKLNSEARKLLVDSYVALRKGDTTPGSRVAYRMTVRQLEALIRLSEAIARSHL 638

Query: 362  ELLVQPRHVRVAVRLLKTSII------SVEASEIDLSDFQEAVXXXXXXXXXXXXXXXXX 523
            E  VQPRHVRVAV+LLKTSII      +VE+SEIDLS+FQEA                  
Sbjct: 639  ETQVQPRHVRVAVKLLKTSIIRQENLENVESSEIDLSEFQEA---------YGDGGDGGN 689

Query: 524  XXXXNAQTQPSTEMEGPASGKTENGAEPSSKQAKKLVISDEYFQRVTQALVMCLRQKEEE 703
                    QPS     P S  TENGA  +S+Q KKLVIS+EYFQRVTQALVM LRQ EE 
Sbjct: 690  DGPSQGDAQPSNADANPVSENTENGAASASRQGKKLVISEEYFQRVTQALVMRLRQHEEA 749

Query: 704  AMQKGTGLAGMRQRELIQWYIDQQNKKSAYGSL 802
             M+ GTGLAGMRQ ELI+WY+DQQN+K++Y SL
Sbjct: 750  VMRDGTGLAGMRQGELIRWYVDQQNQKNSYSSL 782


>ref|XP_002534164.1| minichromosome maintenance protein, putative [Ricinus communis]
            gi|223525759|gb|EEF28218.1| minichromosome maintenance
            protein, putative [Ricinus communis]
          Length = 713

 Score =  365 bits (937), Expect = 6e-99
 Identities = 192/267 (71%), Positives = 212/267 (79%)
 Frame = +2

Query: 2    KYNVALPPAILSRFDLVYVMIDEPDDQTDYHIAHHIVRVHQKHEEALSPAFTTTQLKRYI 181
            KYNVALPPAILSRFDLVYVMID+PDDQ DYHIAHHIVRVHQK EEAL+PAFTT QLKRYI
Sbjct: 393  KYNVALPPAILSRFDLVYVMIDDPDDQVDYHIAHHIVRVHQKREEALAPAFTTAQLKRYI 452

Query: 182  AYAKTLKPKLSQEARKLLVDSYVALRRGDTAPGSRTAYRMTVRQLEALIRLSEAIARSHL 361
            AYAKTLKPKL+ EARKLLVDSYVALR+GDT PGSR AYRMTVRQLEALIRLSEAIARSHL
Sbjct: 453  AYAKTLKPKLNSEARKLLVDSYVALRKGDTTPGSRVAYRMTVRQLEALIRLSEAIARSHL 512

Query: 362  ELLVQPRHVRVAVRLLKTSIISVEASEIDLSDFQEAVXXXXXXXXXXXXXXXXXXXXXNA 541
            E  VQPRHVR+AVRLLKTSIISVE+SEIDLS+FQ+                         
Sbjct: 513  ENQVQPRHVRLAVRLLKTSIISVESSEIDLSEFQDG------NRDDIDGSDGGNDGAGQG 566

Query: 542  QTQPSTEMEGPASGKTENGAEPSSKQAKKLVISDEYFQRVTQALVMCLRQKEEEAMQKGT 721
              Q +    GP SG TE G   +S+Q KKLVIS+EYFQRVTQALVM LRQ EE   + GT
Sbjct: 567  DAQQNNAESGPTSGNTEGGVGSASQQGKKLVISEEYFQRVTQALVMRLRQHEESVTRDGT 626

Query: 722  GLAGMRQRELIQWYIDQQNKKSAYGSL 802
            GLAGM+Q ELI+WYI+QQN+K++Y S+
Sbjct: 627  GLAGMKQGELIRWYIEQQNQKNSYSSV 653


>ref|XP_004134510.1| PREDICTED: DNA replication licensing factor MCM6-like [Cucumis
            sativus] gi|449515593|ref|XP_004164833.1| PREDICTED: DNA
            replication licensing factor MCM6-like [Cucumis sativus]
          Length = 839

 Score =  351 bits (900), Expect = 1e-94
 Identities = 184/267 (68%), Positives = 211/267 (79%)
 Frame = +2

Query: 2    KYNVALPPAILSRFDLVYVMIDEPDDQTDYHIAHHIVRVHQKHEEALSPAFTTTQLKRYI 181
            KYNVALPPAILSRFDLVYVMID+PDDQTDYHIAHHIVRVHQKHE+AL+PAFTT +LKRYI
Sbjct: 517  KYNVALPPAILSRFDLVYVMIDDPDDQTDYHIAHHIVRVHQKHEDALAPAFTTAELKRYI 576

Query: 182  AYAKTLKPKLSQEARKLLVDSYVALRRGDTAPGSRTAYRMTVRQLEALIRLSEAIARSHL 361
            AYAKTLKPKLS EARK+LVDSYVALRRGDT PG R AYRMTVRQLEALIRLSEAIARS+L
Sbjct: 577  AYAKTLKPKLSLEARKVLVDSYVALRRGDTTPGCRVAYRMTVRQLEALIRLSEAIARSYL 636

Query: 362  ELLVQPRHVRVAVRLLKTSIISVEASEIDLSDFQEAVXXXXXXXXXXXXXXXXXXXXXNA 541
            E LVQ RHVR+AV LLKTSIISVE+SEIDLS+FQE                       N 
Sbjct: 637  ETLVQSRHVRLAVTLLKTSIISVESSEIDLSEFQEETNGGGDGDNNADGPNEVDAEPRNG 696

Query: 542  QTQPSTEMEGPASGKTENGAEPSSKQAKKLVISDEYFQRVTQALVMCLRQKEEEAMQKGT 721
             T+ +T      + +  +G+  S  + +KL +SDEYFQRVTQALVM LRQ EE   Q+G 
Sbjct: 697  ATEATT-----GNSEMGSGSGNSQHRKEKLFVSDEYFQRVTQALVMRLRQHEEYVNQEGP 751

Query: 722  GLAGMRQRELIQWYIDQQNKKSAYGSL 802
            GLAGMRQR+LI+WY+DQQN++++Y S+
Sbjct: 752  GLAGMRQRDLIEWYVDQQNERNSYSSM 778


>emb|CAN77381.1| hypothetical protein VITISV_029723 [Vitis vinifera]
          Length = 807

 Score =  350 bits (897), Expect = 3e-94
 Identities = 190/267 (71%), Positives = 205/267 (76%)
 Frame = +2

Query: 2    KYNVALPPAILSRFDLVYVMIDEPDDQTDYHIAHHIVRVHQKHEEALSPAFTTTQLKRYI 181
            KYNVALPPAILSRFDLVYVMID+PDDQ DYHIAHHIVRVHQKHE+AL PAFTT QLKRY 
Sbjct: 509  KYNVALPPAILSRFDLVYVMIDDPDDQIDYHIAHHIVRVHQKHEDALXPAFTTAQLKRYF 568

Query: 182  AYAKTLKPKLSQEARKLLVDSYVALRRGDTAPGSRTAYRMTVRQLEALIRLSEAIARSHL 361
            AYAKTLKPKLS EARKLLVDSYVALRRGDT PGSR AYRMTVRQLEALIRLSEAIARSHL
Sbjct: 569  AYAKTLKPKLSSEARKLLVDSYVALRRGDTTPGSRVAYRMTVRQLEALIRLSEAIARSHL 628

Query: 362  ELLVQPRHVRVAVRLLKTSIISVEASEIDLSDFQEAVXXXXXXXXXXXXXXXXXXXXXNA 541
            E  VQPRHVRVAVRLLKTSII  ++SEIDLS+FQ                          
Sbjct: 629  ETQVQPRHVRVAVRLLKTSIIR-QSSEIDLSEFQ-------------------------- 661

Query: 542  QTQPSTEMEGPASGKTENGAEPSSKQAKKLVISDEYFQRVTQALVMCLRQKEEEAMQKGT 721
                + E      G  E+G+   ++Q KKLVISDEYFQRVTQALVM LRQ EE  MQ GT
Sbjct: 662  --VENGEGGDDGHGGDESGSGSGNQQGKKLVISDEYFQRVTQALVMRLRQHEESVMQDGT 719

Query: 722  GLAGMRQRELIQWYIDQQNKKSAYGSL 802
            GLAGMRQR+LIQWY+ QQN+K+ Y S+
Sbjct: 720  GLAGMRQRDLIQWYVGQQNEKNNYSSM 746


>ref|XP_003546381.1| PREDICTED: maternal DNA replication licensing factor mcm6-like
            [Glycine max]
          Length = 831

 Score =  344 bits (883), Expect = 1e-92
 Identities = 181/267 (67%), Positives = 209/267 (78%)
 Frame = +2

Query: 2    KYNVALPPAILSRFDLVYVMIDEPDDQTDYHIAHHIVRVHQKHEEALSPAFTTTQLKRYI 181
            KYNVALPPAILSRFDLVYVMID+PDDQTDYHIAHHIVRVHQK E AL+PAFTT +LKRYI
Sbjct: 514  KYNVALPPAILSRFDLVYVMIDDPDDQTDYHIAHHIVRVHQKREGALAPAFTTAELKRYI 573

Query: 182  AYAKTLKPKLSQEARKLLVDSYVALRRGDTAPGSRTAYRMTVRQLEALIRLSEAIARSHL 361
            AYAKTLKPKLS +ARKLLVDSYVALRRGDT PGSR AYRMTVRQLEALIRLSEAIAR HL
Sbjct: 574  AYAKTLKPKLSPDARKLLVDSYVALRRGDTNPGSRVAYRMTVRQLEALIRLSEAIARCHL 633

Query: 362  ELLVQPRHVRVAVRLLKTSIISVEASEIDLSDFQEAVXXXXXXXXXXXXXXXXXXXXXNA 541
            +  VQPRHVR+AV+LLKTSIISVE+SEIDLS+FQE                       N 
Sbjct: 634  DNEVQPRHVRLAVKLLKTSIISVESSEIDLSEFQE----QNHDDGAGGGNENDNNRDANY 689

Query: 542  QTQPSTEMEGPASGKTENGAEPSSKQAKKLVISDEYFQRVTQALVMCLRQKEEEAMQKGT 721
            Q    T  +   +G   +G++P   Q +KL++SDEY+QRVT AL+M LRQ EE  +Q G 
Sbjct: 690  QEGNDTAQQAAGNGNPADGSKP---QVRKLIMSDEYYQRVTSALIMRLRQHEEAVVQGGD 746

Query: 722  GLAGMRQRELIQWYIDQQNKKSAYGSL 802
            GL+GMRQ++LIQWY+DQQN+++ Y S+
Sbjct: 747  GLSGMRQKDLIQWYVDQQNERNNYSSM 773


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