BLASTX nr result

ID: Coptis24_contig00017148 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017148
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603683.1| Ubiquitin-fold modifier-conjugating enzyme [...   349   4e-94
ref|XP_003603681.1| Ubiquitin-fold modifier-conjugating enzyme [...   349   4e-94
ref|NP_001236810.1| uncharacterized protein LOC100527748 [Glycin...   347   1e-93
ref|XP_002301104.1| predicted protein [Populus trichocarpa] gi|1...   347   1e-93
gb|AFK35090.1| unknown [Lotus japonicus] gi|388509226|gb|AFK4267...   346   3e-93

>ref|XP_003603683.1| Ubiquitin-fold modifier-conjugating enzyme [Medicago truncatula]
           gi|355492731|gb|AES73934.1| Ubiquitin-fold
           modifier-conjugating enzyme [Medicago truncatula]
          Length = 318

 Score =  349 bits (895), Expect = 4e-94
 Identities = 160/177 (90%), Positives = 169/177 (95%)
 Frame = -2

Query: 653 RRKMESWDPNTKSTLTQIPLLTTKAGPRDGALWTQRLKEEYKSLIGYTGMNKSNDNDWFR 474
           +R+ME WDPNTKSTLTQIPLLTTKAGPRDGA WT RLKEEYKSLI YT MNKSNDNDWFR
Sbjct: 142 KREMEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTTRLKEEYKSLIAYTQMNKSNDNDWFR 201

Query: 473 ISAANPEGTKWTGKCWYVHNLFKYEFDLQFDIPVTYPATAPELELPQLDGKTNKMYRGGK 294
           ISA+NPEGT+WTGKCWYV+NL KYEFDLQFDIPVTYP+TAPELELPQLDGKT KMYRGGK
Sbjct: 202 ISASNPEGTRWTGKCWYVYNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGK 261

Query: 293 ICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNATSSTEA 123
           ICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+AT+S E+
Sbjct: 262 ICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDATTSAES 318


>ref|XP_003603681.1| Ubiquitin-fold modifier-conjugating enzyme [Medicago truncatula]
           gi|355492729|gb|AES73932.1| Ubiquitin-fold
           modifier-conjugating enzyme [Medicago truncatula]
          Length = 335

 Score =  349 bits (895), Expect = 4e-94
 Identities = 160/177 (90%), Positives = 169/177 (95%)
 Frame = -2

Query: 653 RRKMESWDPNTKSTLTQIPLLTTKAGPRDGALWTQRLKEEYKSLIGYTGMNKSNDNDWFR 474
           +R+ME WDPNTKSTLTQIPLLTTKAGPRDGA WT RLKEEYKSLI YT MNKSNDNDWFR
Sbjct: 159 KREMEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTTRLKEEYKSLIAYTQMNKSNDNDWFR 218

Query: 473 ISAANPEGTKWTGKCWYVHNLFKYEFDLQFDIPVTYPATAPELELPQLDGKTNKMYRGGK 294
           ISA+NPEGT+WTGKCWYV+NL KYEFDLQFDIPVTYP+TAPELELPQLDGKT KMYRGGK
Sbjct: 219 ISASNPEGTRWTGKCWYVYNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGK 278

Query: 293 ICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNATSSTEA 123
           ICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+AT+S E+
Sbjct: 279 ICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDATTSAES 335


>ref|NP_001236810.1| uncharacterized protein LOC100527748 [Glycine max]
           gi|255633104|gb|ACU16907.1| unknown [Glycine max]
          Length = 175

 Score =  347 bits (891), Expect = 1e-93
 Identities = 161/175 (92%), Positives = 168/175 (96%), Gaps = 1/175 (0%)
 Frame = -2

Query: 644 MESWDPNTKSTLTQIPLLTTKAGPRDGALWTQRLKEEYKSLIGYTGMNKSNDNDWFRISA 465
           ME WDPNTKSTLTQIPLLTTKAGPRDGA WTQRLKEEYK+LI YT MNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISA 60

Query: 464 ANPEGTKWTGKCWYVHNLFKYEFDLQFDIPVTYPATAPELELPQLDGKTNKMYRGGKICL 285
           ANPEGT+WTGKCWYVHNL KYEFDLQFD+PVTYP+TAPELELPQLDGKT KMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDVPVTYPSTAPELELPQLDGKTQKMYRGGKICL 120

Query: 284 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDN-ATSSTEA 123
           TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+ AT+STE+
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDTATTSTES 175


>ref|XP_002301104.1| predicted protein [Populus trichocarpa] gi|118484728|gb|ABK94233.1|
           unknown [Populus trichocarpa]
           gi|222842830|gb|EEE80377.1| predicted protein [Populus
           trichocarpa]
          Length = 174

 Score =  347 bits (890), Expect = 1e-93
 Identities = 158/174 (90%), Positives = 167/174 (95%)
 Frame = -2

Query: 644 MESWDPNTKSTLTQIPLLTTKAGPRDGALWTQRLKEEYKSLIGYTGMNKSNDNDWFRISA 465
           ME WDPNTKSTLTQIPLLTTKAGPRDGA WT RLKEEYK+LI YT MNKSNDNDWFRIS+
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGAAWTTRLKEEYKALIAYTQMNKSNDNDWFRISS 60

Query: 464 ANPEGTKWTGKCWYVHNLFKYEFDLQFDIPVTYPATAPELELPQLDGKTNKMYRGGKICL 285
           ANPEGT+WTGKCWYVHNL KYEFDLQFDIPVTYP+TAPELELPQLDGKT KMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVHNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGKICL 120

Query: 284 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNATSSTEA 123
           TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVP+LVDSGMIKHKD+ATS++E+
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPVLVDSGMIKHKDDATSTSES 174


>gb|AFK35090.1| unknown [Lotus japonicus] gi|388509226|gb|AFK42679.1| unknown
           [Lotus japonicus]
          Length = 174

 Score =  346 bits (887), Expect = 3e-93
 Identities = 159/174 (91%), Positives = 165/174 (94%)
 Frame = -2

Query: 644 MESWDPNTKSTLTQIPLLTTKAGPRDGALWTQRLKEEYKSLIGYTGMNKSNDNDWFRISA 465
           ME WDPNTKSTLTQIPLLTTKAGPRDG  WTQRLKEEYKSLI YT MNKSNDNDWFRISA
Sbjct: 1   MEGWDPNTKSTLTQIPLLTTKAGPRDGTAWTQRLKEEYKSLIAYTQMNKSNDNDWFRISA 60

Query: 464 ANPEGTKWTGKCWYVHNLFKYEFDLQFDIPVTYPATAPELELPQLDGKTNKMYRGGKICL 285
           ANPEGT+WTGKCWYV+NL KYEFDLQFDIPVTYP+TAPELELPQLDGKT KMYRGGKICL
Sbjct: 61  ANPEGTRWTGKCWYVYNLLKYEFDLQFDIPVTYPSTAPELELPQLDGKTQKMYRGGKICL 120

Query: 284 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDNATSSTEA 123
           TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKD+A +S E+
Sbjct: 121 TVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEVPILVDSGMIKHKDDAATSAES 174


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