BLASTX nr result
ID: Coptis24_contig00017147
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017147 (1013 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004136720.1| PREDICTED: pentatricopeptide repeat-containi... 102 2e-19 ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|2... 102 2e-19 emb|CBI39664.3| unnamed protein product [Vitis vinifera] 100 7e-19 ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containi... 100 7e-19 emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera] 100 7e-19 >ref|XP_004136720.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Cucumis sativus] gi|449501182|ref|XP_004161300.1| PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Cucumis sativus] Length = 728 Score = 102 bits (253), Expect = 2e-19 Identities = 53/125 (42%), Positives = 76/125 (60%) Frame = -3 Query: 990 ECAWLLDQMVDDGIIPCSETVYRVVSFMASHSQLHVVVYTLNKLISKTGLFSLAINKMLI 811 E L + MV++ ++P SE +Y + +A+HSQLH++ T++KL++ T L + A +LI Sbjct: 599 ESILLFNHMVNEALLPDSERLYDLFLCIANHSQLHMISTTIDKLVTHTDLVNTATYNLLI 658 Query: 810 HGLVKEGHKRDACKLLDHMLDNGWLPDAVTHSLLIXXXXXXXXXXXXXXXXYSEVPDKVS 631 +GL KE K +ACKLLD ML+ GW+PDA TH LLI S + D VS Sbjct: 659 NGLWKEDRKYEACKLLDSMLEKGWVPDATTHGLLIGSLFQEKTGDKVLISENSAIEDNVS 718 Query: 630 SILVD 616 SILV+ Sbjct: 719 SILVE 723 >ref|XP_002318926.1| predicted protein [Populus trichocarpa] gi|222857302|gb|EEE94849.1| predicted protein [Populus trichocarpa] Length = 724 Score = 102 bits (253), Expect = 2e-19 Identities = 52/135 (38%), Positives = 86/135 (63%) Frame = -3 Query: 1005 EKMTSECAWLLDQMVDDGIIPCSETVYRVVSFMASHSQLHVVVYTLNKLISKTGLFSLAI 826 +K +C L+ MV++G++P S+T+Y+++S +A+HSQL+++ +L+KL+S + A+ Sbjct: 591 QKQIKDCTLFLNVMVNEGLVPDSDTLYKLLSCLANHSQLYLISLSLDKLVSDCEVLDSAM 650 Query: 825 NKMLIHGLVKEGHKRDACKLLDHMLDNGWLPDAVTHSLLIXXXXXXXXXXXXXXXXYSEV 646 +LI+GL KEG+K +A +LLD ML+ GW+PD++TH LLI S + Sbjct: 651 YNILINGLWKEGNKNEAHRLLDLMLEKGWVPDSMTHGLLIGSGNREGTGKGKLTYVDS-I 709 Query: 645 PDKVSSILVDSFLDT 601 D VS ILV+ +T Sbjct: 710 KDSVSDILVEGLGET 724 >emb|CBI39664.3| unnamed protein product [Vitis vinifera] Length = 512 Score = 100 bits (248), Expect = 7e-19 Identities = 51/137 (37%), Positives = 78/137 (56%) Frame = -3 Query: 1011 CLEKMTSECAWLLDQMVDDGIIPCSETVYRVVSFMASHSQLHVVVYTLNKLISKTGLFSL 832 C T + A + MV +G++P SETV ++S + HSQLH ++ + KL S + + Sbjct: 376 CALSRTEDIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLASDGEILNS 435 Query: 831 AINKMLIHGLVKEGHKRDACKLLDHMLDNGWLPDAVTHSLLIXXXXXXXXXXXXXXXXYS 652 ++ +LI GL+KEG+K +AC+LLD ML+ GW+PDA TH LLI S Sbjct: 436 SMYNLLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIGSVVSEVPHKEAVEYENS 495 Query: 651 EVPDKVSSILVDSFLDT 601 + DK+ +IL + +T Sbjct: 496 CMQDKIGNILAEGLRET 512 >ref|XP_002276575.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62590-like [Vitis vinifera] Length = 730 Score = 100 bits (248), Expect = 7e-19 Identities = 51/137 (37%), Positives = 78/137 (56%) Frame = -3 Query: 1011 CLEKMTSECAWLLDQMVDDGIIPCSETVYRVVSFMASHSQLHVVVYTLNKLISKTGLFSL 832 C T + A + MV +G++P SETV ++S + HSQLH ++ + KL S + + Sbjct: 594 CALSRTEDIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLASDGEILNS 653 Query: 831 AINKMLIHGLVKEGHKRDACKLLDHMLDNGWLPDAVTHSLLIXXXXXXXXXXXXXXXXYS 652 ++ +LI GL+KEG+K +AC+LLD ML+ GW+PDA TH LLI S Sbjct: 654 SMYNLLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIGSVVSEVPHKEAVEYENS 713 Query: 651 EVPDKVSSILVDSFLDT 601 + DK+ +IL + +T Sbjct: 714 CMQDKIGNILAEGLRET 730 >emb|CAN65741.1| hypothetical protein VITISV_037758 [Vitis vinifera] Length = 730 Score = 100 bits (248), Expect = 7e-19 Identities = 51/137 (37%), Positives = 78/137 (56%) Frame = -3 Query: 1011 CLEKMTSECAWLLDQMVDDGIIPCSETVYRVVSFMASHSQLHVVVYTLNKLISKTGLFSL 832 C T + A + MV +G++P SETV ++S + HSQLH ++ + KL S + + Sbjct: 594 CALSRTEDIARFFNLMVSEGLVPDSETVATLLSCLTKHSQLHTILTAIGKLASDGEILNS 653 Query: 831 AINKMLIHGLVKEGHKRDACKLLDHMLDNGWLPDAVTHSLLIXXXXXXXXXXXXXXXXYS 652 ++ +LI GL+KEG+K +AC+LLD ML+ GW+PDA TH LLI S Sbjct: 654 SMYNLLIIGLLKEGYKSEACRLLDLMLEKGWVPDASTHGLLIGSVVSEVPHKEAVEYENS 713 Query: 651 EVPDKVSSILVDSFLDT 601 + DK+ +IL + +T Sbjct: 714 CMQDKIGNILAEGLRET 730