BLASTX nr result

ID: Coptis24_contig00017129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017129
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio...    85   7e-15
emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]    85   7e-15
emb|CBI32503.3| unnamed protein product [Vitis vinifera]               83   2e-14
emb|CAN72782.1| hypothetical protein VITISV_008015 [Vitis vinifera]    78   8e-13
ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12

>ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Vitis vinifera]
          Length = 407

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/103 (43%), Positives = 64/103 (62%)
 Frame = -3

Query: 311 SAELVSGTRRPFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVCGRYLLNISNRFARRYL 132
           SAE      R  +  +K+RA+ AA  F   NPFC VI++ +YV  R+LL++ +RFA +YL
Sbjct: 268 SAETSKQRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYL 327

Query: 131 KGDAPFVSLRVLDGRTWQVQPVFTIGGANVKLSKGWKTFVLDN 3
            G + F+ L+  DG+ W V+ +   G + VKLSKGW  FV DN
Sbjct: 328 NGVSKFIKLQTSDGKQWHVRCL--SGESRVKLSKGWTEFVKDN 368


>emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera]
          Length = 563

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/103 (43%), Positives = 64/103 (62%)
 Frame = -3

Query: 311 SAELVSGTRRPFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVCGRYLLNISNRFARRYL 132
           SAE      R  +  +K+RA+ AA  F   NPFC VI++ +YV  R+LL++ +RFA +YL
Sbjct: 424 SAETSKQRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYL 483

Query: 131 KGDAPFVSLRVLDGRTWQVQPVFTIGGANVKLSKGWKTFVLDN 3
            G + F+ L+  DG+ W V+ +   G + VKLSKGW  FV DN
Sbjct: 484 NGVSKFIKLQTSDGKQWHVRCL--SGESRVKLSKGWTEFVKDN 524


>emb|CBI32503.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 42/94 (44%), Positives = 61/94 (64%)
 Frame = -3

Query: 284 RPFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVCGRYLLNISNRFARRYLKGDAPFVSL 105
           R  +  +K+RA+ AA  F   NPFC VI++ +YV  R+LL++ +RFA +YL G + F+ L
Sbjct: 225 RVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYLNGVSKFIKL 284

Query: 104 RVLDGRTWQVQPVFTIGGANVKLSKGWKTFVLDN 3
           +  DG+ W V+ +   G + VKLSKGW  FV DN
Sbjct: 285 QTSDGKQWHVRCL--SGESRVKLSKGWTEFVKDN 316


>emb|CAN72782.1| hypothetical protein VITISV_008015 [Vitis vinifera]
          Length = 318

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 41/93 (44%), Positives = 58/93 (62%)
 Frame = -3

Query: 281 PFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVCGRYLLNISNRFARRYLKGDAPFVSLR 102
           P + S++  A+  A  F +KNPF IV MQPTYV  RY LNI  RF +R+ + +    +L 
Sbjct: 188 PLAASEEXGALRRAKAFKTKNPFFIVTMQPTYVTRRYKLNIPLRFVKRHFEKNNNTATLL 247

Query: 101 VLDGRTWQVQPVFTIGGANVKLSKGWKTFVLDN 3
           V  GRTW V+   ++   +VK S+GW+ FV+DN
Sbjct: 248 VPAGRTWPVK--CSVAKTDVKFSRGWRNFVVDN 278


>ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/103 (42%), Positives = 63/103 (61%)
 Frame = -3

Query: 311 SAELVSGTRRPFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVCGRYLLNISNRFARRYL 132
           ++E ++  RR  +  +KER I AA  F S NPF  VI++P+YV   +LL+I + FAR +L
Sbjct: 182 TSETLTRRRRAVTPEEKERTIRAAHMFRSDNPFFRVILRPSYVYRGFLLHIPSSFARTFL 241

Query: 131 KGDAPFVSLRVLDGRTWQVQPVFTIGGANVKLSKGWKTFVLDN 3
                FV+L+V DG+ W V+  F  G A  KL +GW  FV +N
Sbjct: 242 NTVTGFVTLQVSDGKQWPVRCSFKDGKA--KLGQGWTEFVWEN 282


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