BLASTX nr result
ID: Coptis24_contig00017129
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00017129 (316 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281517.1| PREDICTED: B3 domain-containing transcriptio... 85 7e-15 emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera] 85 7e-15 emb|CBI32503.3| unnamed protein product [Vitis vinifera] 83 2e-14 emb|CAN72782.1| hypothetical protein VITISV_008015 [Vitis vinifera] 78 8e-13 ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|2... 76 2e-12 >ref|XP_002281517.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Vitis vinifera] Length = 407 Score = 84.7 bits (208), Expect = 7e-15 Identities = 45/103 (43%), Positives = 64/103 (62%) Frame = -3 Query: 311 SAELVSGTRRPFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVCGRYLLNISNRFARRYL 132 SAE R + +K+RA+ AA F NPFC VI++ +YV R+LL++ +RFA +YL Sbjct: 268 SAETSKQRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYL 327 Query: 131 KGDAPFVSLRVLDGRTWQVQPVFTIGGANVKLSKGWKTFVLDN 3 G + F+ L+ DG+ W V+ + G + VKLSKGW FV DN Sbjct: 328 NGVSKFIKLQTSDGKQWHVRCL--SGESRVKLSKGWTEFVKDN 368 >emb|CAN82369.1| hypothetical protein VITISV_027620 [Vitis vinifera] Length = 563 Score = 84.7 bits (208), Expect = 7e-15 Identities = 45/103 (43%), Positives = 64/103 (62%) Frame = -3 Query: 311 SAELVSGTRRPFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVCGRYLLNISNRFARRYL 132 SAE R + +K+RA+ AA F NPFC VI++ +YV R+LL++ +RFA +YL Sbjct: 424 SAETSKQRWRVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYL 483 Query: 131 KGDAPFVSLRVLDGRTWQVQPVFTIGGANVKLSKGWKTFVLDN 3 G + F+ L+ DG+ W V+ + G + VKLSKGW FV DN Sbjct: 484 NGVSKFIKLQTSDGKQWHVRCL--SGESRVKLSKGWTEFVKDN 524 >emb|CBI32503.3| unnamed protein product [Vitis vinifera] Length = 355 Score = 83.2 bits (204), Expect = 2e-14 Identities = 42/94 (44%), Positives = 61/94 (64%) Frame = -3 Query: 284 RPFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVCGRYLLNISNRFARRYLKGDAPFVSL 105 R + +K+RA+ AA F NPFC VI++ +YV R+LL++ +RFA +YL G + F+ L Sbjct: 225 RVVTMEEKKRALHAAEMFQPSNPFCRVILRRSYVHERFLLHMPSRFAEKYLNGVSKFIKL 284 Query: 104 RVLDGRTWQVQPVFTIGGANVKLSKGWKTFVLDN 3 + DG+ W V+ + G + VKLSKGW FV DN Sbjct: 285 QTSDGKQWHVRCL--SGESRVKLSKGWTEFVKDN 316 >emb|CAN72782.1| hypothetical protein VITISV_008015 [Vitis vinifera] Length = 318 Score = 77.8 bits (190), Expect = 8e-13 Identities = 41/93 (44%), Positives = 58/93 (62%) Frame = -3 Query: 281 PFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVCGRYLLNISNRFARRYLKGDAPFVSLR 102 P + S++ A+ A F +KNPF IV MQPTYV RY LNI RF +R+ + + +L Sbjct: 188 PLAASEEXGALRRAKAFKTKNPFFIVTMQPTYVTRRYKLNIPLRFVKRHFEKNNNTATLL 247 Query: 101 VLDGRTWQVQPVFTIGGANVKLSKGWKTFVLDN 3 V GRTW V+ ++ +VK S+GW+ FV+DN Sbjct: 248 VPAGRTWPVK--CSVAKTDVKFSRGWRNFVVDN 278 >ref|XP_002330309.1| predicted protein [Populus trichocarpa] gi|222871344|gb|EEF08475.1| predicted protein [Populus trichocarpa] Length = 321 Score = 76.3 bits (186), Expect = 2e-12 Identities = 44/103 (42%), Positives = 63/103 (61%) Frame = -3 Query: 311 SAELVSGTRRPFSFSKKERAIIAATKFTSKNPFCIVIMQPTYVCGRYLLNISNRFARRYL 132 ++E ++ RR + +KER I AA F S NPF VI++P+YV +LL+I + FAR +L Sbjct: 182 TSETLTRRRRAVTPEEKERTIRAAHMFRSDNPFFRVILRPSYVYRGFLLHIPSSFARTFL 241 Query: 131 KGDAPFVSLRVLDGRTWQVQPVFTIGGANVKLSKGWKTFVLDN 3 FV+L+V DG+ W V+ F G A KL +GW FV +N Sbjct: 242 NTVTGFVTLQVSDGKQWPVRCSFKDGKA--KLGQGWTEFVWEN 282