BLASTX nr result
ID: Coptis24_contig00017122
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00017122
(846 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002518974.1| conserved hypothetical protein [Ricinus comm... 180 6e-48
ref|XP_002303432.1| predicted protein [Populus trichocarpa] gi|2... 171 2e-44
ref|XP_002326542.1| predicted protein [Populus trichocarpa] gi|2... 164 4e-43
ref|NP_174505.1| uncharacterized protein [Arabidopsis thaliana] ... 165 4e-42
ref|XP_002893715.1| hypothetical protein ARALYDRAFT_473416 [Arab... 165 2e-41
>ref|XP_002518974.1| conserved hypothetical protein [Ricinus communis]
gi|223541961|gb|EEF43507.1| conserved hypothetical
protein [Ricinus communis]
Length = 198
Score = 180 bits (457), Expect(2) = 6e-48
Identities = 94/170 (55%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Frame = -3
Query: 781 MVLWELALGTAYFLGLKRSYKLALKLERRLITSNHPKIRQFASRRTRAIFDMALGVHRKV 602
MVLWE+ LGTAYFLGLKR+Y+LAL+++RRL++ N PK+R F RRTRA FD+AL VH+ +
Sbjct: 1 MVLWEITLGTAYFLGLKRTYRLALRIQRRLVSPNRPKVRNFLQRRTRAAFDVALRVHQNI 60
Query: 601 QLKDIEVGRNLGNWIVRWLDHMKPSAEIRGNTPSKPFSSS--GTTKNLSNSVHQPPNPNQ 428
Q +D+EVGRNLGNWI+RWLD MKPSA+IRG +P KP SS+ T + S+S + P Q
Sbjct: 61 QQRDLEVGRNLGNWILRWLDRMKPSAQIRGTSPLKPPSSNVKMTKQTSSSSQLKTPGSIQ 120
Query: 427 KSNNAPAAQKSGR-VFATSLNIGSKSFPTLSMMMRPLNPFRANIQFEHLW 281
N Q SGR +F S N SK FPT++M+MRP P Q+ HL+
Sbjct: 121 SRN-----QDSGRHLFTGSRNTWSKPFPTIAMIMRPPRPAGTITQYRHLF 165
Score = 37.4 bits (85), Expect(2) = 6e-48
Identities = 20/38 (52%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Frame = -1
Query: 306 QTSNLSICGPDLARPTAGGGA--FEGAVRKDIMQWMLR 199
Q +L I GP++A + GGA FEG +RKDIMQ+ML+
Sbjct: 160 QYRHLFIRGPEMASTSYIGGARGFEGVIRKDIMQYMLQ 197
>ref|XP_002303432.1| predicted protein [Populus trichocarpa] gi|222840864|gb|EEE78411.1|
predicted protein [Populus trichocarpa]
Length = 204
Score = 171 bits (432), Expect(2) = 2e-44
Identities = 90/173 (52%), Positives = 124/173 (71%), Gaps = 7/173 (4%)
Frame = -3
Query: 781 MVLWELALGTAYFLGLKRSYKLALKLERRLITSNHPKIRQFASRRTRAIFDMALGVHRKV 602
MVLWE+ LGTAYFLGLKR+Y+LA++++RRLI+ +P+IRQF RRTRA+FD+AL VH +
Sbjct: 1 MVLWEITLGTAYFLGLKRTYRLAVRIQRRLISPKYPRIRQFVQRRTRAVFDVALKVHLNI 60
Query: 601 QLKDIEVGRNLGNWIVRWLDHMKPSAEIRGNTPSKP----FSSSGTTKNLSNSVH--QPP 440
Q +DIEVGR+LGN I+RWLD MKPSA+IRG P KP S++ TK ++N+ + P
Sbjct: 61 QQRDIEVGRHLGNRILRWLDRMKPSAQIRGPPPVKPTNGASSNTNVTKQVTNNTSHLKAP 120
Query: 439 NPNQKSNNAPAAQKSGR-VFATSLNIGSKSFPTLSMMMRPLNPFRANIQFEHL 284
+ Q S + Q+S R +F ++ N+ SK FP+++MMMRP P Q+ HL
Sbjct: 121 SIGQTSRH----QESDRHLFTSARNMWSKPFPSIAMMMRPSRPAGTFTQYRHL 169
Score = 35.0 bits (79), Expect(2) = 2e-44
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = -1
Query: 306 QTSNLSICGPDLARPT---AGGGAFEGAVRKDIMQWMLR 199
Q +LSI P+++RP GG ++G RKDIMQ++L+
Sbjct: 165 QYRHLSIQCPEMSRPNYNIGGGSGYQGVFRKDIMQYILQ 203
>ref|XP_002326542.1| predicted protein [Populus trichocarpa] gi|222833864|gb|EEE72341.1|
predicted protein [Populus trichocarpa]
Length = 203
Score = 164 bits (415), Expect(2) = 4e-43
Identities = 85/168 (50%), Positives = 114/168 (67%), Gaps = 2/168 (1%)
Frame = -3
Query: 781 MVLWELALGTAYFLGLKRSYKLALKLERRLITSNHPKIRQFASRRTRAIFDMALGVHRKV 602
MVLWE+ LGTAYFLGLKR+YKLA +++ R+I+ +P+IRQF RRTRAIFD+AL VH V
Sbjct: 1 MVLWEITLGTAYFLGLKRAYKLASRIQLRVISPKYPRIRQFVQRRTRAIFDVALKVHLNV 60
Query: 601 QLKDIEVGRNLGNWIVRWLDHMKPSAEIRGNTPSKPFSSSGTTKNLSNSVHQPPNPNQKS 422
Q +DIEVGRNLGN I+RWL MKPSA+I G +P KP + + + N++N V +
Sbjct: 61 QQRDIEVGRNLGNRILRWLHQMKPSAQIHGPSPEKPTNGASSNMNVTNQVTNTSHLKASG 120
Query: 421 -NNAPAAQKSGR-VFATSLNIGSKSFPTLSMMMRPLNPFRANIQFEHL 284
Q+S R +F ++ + SK FP+++MMMRP P Q+ HL
Sbjct: 121 IGQTSRCQESYRHLFTSARSTWSKPFPSIAMMMRPSRPAGIFTQYRHL 168
Score = 37.4 bits (85), Expect(2) = 4e-43
Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Frame = -1
Query: 306 QTSNLSICGPDLARPT---AGGGAFEGAVRKDIMQWMLR 199
Q +LSI GP+++RP GG F+G RKD+MQ++L+
Sbjct: 164 QYRHLSIQGPEMSRPNYNIGGGCGFQGVFRKDMMQYILQ 202
>ref|NP_174505.1| uncharacterized protein [Arabidopsis thaliana]
gi|8920600|gb|AAF81322.1|AC007767_2 Contains similarity
to an unknown protein At2g35480 gi|3608140 from
Arabidopsis thaliana BAC T32F12 gb|AC005314. ESTs
gb|AV557757 and gb|AV555222 come from this gene
[Arabidopsis thaliana]
gi|12597866|gb|AAG60175.1|AC084110_8 hypothetical
protein [Arabidopsis thaliana]
gi|44681340|gb|AAS47610.1| At1g32260 [Arabidopsis
thaliana] gi|45773860|gb|AAS76734.1| At1g32260
[Arabidopsis thaliana] gi|332193336|gb|AEE31457.1|
uncharacterized protein [Arabidopsis thaliana]
Length = 202
Score = 165 bits (418), Expect(2) = 4e-42
Identities = 83/169 (49%), Positives = 112/169 (66%), Gaps = 1/169 (0%)
Frame = -3
Query: 781 MVLWELALGTAYFLGLKRSYKLALKLERRLITSNHPKIRQFASRRTRAIFDMALGVHRKV 602
MV WE+ LGTAYFLGL+R+Y+LALK++RRL+T HPKIRQF RRTR IFD+A+ VH+ +
Sbjct: 1 MVFWEITLGTAYFLGLRRTYRLALKIQRRLVTPKHPKIRQFLHRRTRKIFDVAISVHKNI 60
Query: 601 QLKDIEVGRNLGNWIVRWLDHMKPSAEIRGNTPSKPFSSSGTTKNLSNSVHQPPNPNQKS 422
Q +DIEVGRNLGNWI+RWLD MKP+A+IR S+S K + P + +
Sbjct: 61 QERDIEVGRNLGNWILRWLDKMKPAAQIRTRPELPHNSNSNMDKAKRLTELSRPKSHTNT 120
Query: 421 NNAPAAQKSGRVFATSL-NIGSKSFPTLSMMMRPLNPFRANIQFEHLWT 278
P ++S R TSL + K FP++SMM++P P Q+ H ++
Sbjct: 121 TQTPQNRESDRHLFTSLKHFRHKPFPSVSMMIQPPRPNGTTTQYRHYYS 169
Score = 32.7 bits (73), Expect(2) = 4e-42
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -1
Query: 252 GGAFEGAVRKDIMQWMLRK 196
GG F G VRKDI+QWM ++
Sbjct: 184 GGGFNGVVRKDILQWMAQR 202
>ref|XP_002893715.1| hypothetical protein ARALYDRAFT_473416 [Arabidopsis lyrata subsp.
lyrata] gi|297339557|gb|EFH69974.1| hypothetical protein
ARALYDRAFT_473416 [Arabidopsis lyrata subsp. lyrata]
Length = 201
Score = 165 bits (417), Expect(2) = 2e-41
Identities = 83/168 (49%), Positives = 112/168 (66%), Gaps = 3/168 (1%)
Frame = -3
Query: 781 MVLWELALGTAYFLGLKRSYKLALKLERRLITSNHPKIRQFASRRTRAIFDMALGVHRKV 602
MV WE+ LGTAYFLGL+R+Y+LALK++RR+++ HPKIR F RRTR IFD+A+ VH+ +
Sbjct: 1 MVFWEITLGTAYFLGLRRTYRLALKIQRRIVSPKHPKIRHFLHRRTRKIFDVAISVHKNI 60
Query: 601 QLKDIEVGRNLGNWIVRWLDHMKPSAEI--RGNTPSKPFSSSGTTKNLSNSVHQPPNPNQ 428
Q +DIEVGRNLGNWI+RWLD MKP+A+I R P S+ G K L+ P +
Sbjct: 61 QERDIEVGRNLGNWILRWLDRMKPAAQIRTRPELPHNSNSNMGKAKRLTEL--SQPKSHT 118
Query: 427 KSNNAPAAQKSGRVFATSLN-IGSKSFPTLSMMMRPLNPFRANIQFEH 287
+ P ++SGR +SLN K FP++SMM++P P Q+ H
Sbjct: 119 NTTQTPQNRESGRHLFSSLNHFRHKPFPSVSMMIQPPRPNGTTTQYRH 166
Score = 31.2 bits (69), Expect(2) = 2e-41
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = -1
Query: 252 GGAFEGAVRKDIMQWMLRK 196
GG F+G +RKDI+QW+ ++
Sbjct: 183 GGRFDGVIRKDILQWIAQR 201