BLASTX nr result

ID: Coptis24_contig00017120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017120
         (1681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282518.1| PREDICTED: uncharacterized protein LOC100251...   182   2e-43
ref|XP_002266422.1| PREDICTED: uncharacterized protein LOC100241...   181   4e-43
gb|ACU20832.1| unknown [Glycine max]                                  176   2e-41
ref|XP_003535982.1| PREDICTED: uncharacterized protein LOC100797...   175   3e-41
ref|XP_002315598.1| predicted protein [Populus trichocarpa] gi|2...   168   3e-39

>ref|XP_002282518.1| PREDICTED: uncharacterized protein LOC100251153 [Vitis vinifera]
            gi|296088262|emb|CBI35770.3| unnamed protein product
            [Vitis vinifera]
          Length = 290

 Score =  182 bits (463), Expect = 2e-43
 Identities = 103/255 (40%), Positives = 139/255 (54%), Gaps = 5/255 (1%)
 Frame = -1

Query: 1480 WDSNAETFRXXXXXXXXXXXXXXXXXXXXXXXXXFTWRENRKRKWWSDDDDTQGR----- 1316
            WDSNAETFR                                 R    DDDD + +     
Sbjct: 62   WDSNAETFRTQRSRFNF-------------------------RDTADDDDDDESQEMDPG 96

Query: 1315 NSVIEDVIDNVWFFKVLRSFGWLLPAIMISMLIATGPKTFLMALALPLGQAAVSFAIDKV 1136
            ++++E+ ID+ W FKV RS+GW+LP I+IS+L+ TGPK FLMALALPLGQ+ +S A  K 
Sbjct: 97   SALLEEFIDSFWIFKVFRSYGWMLPLIIISVLLTTGPKAFLMALALPLGQSVLSLAFKKF 156

Query: 1135 FXXXXXXXXXXXXXXRNPFSRAASSVEINEEELVESSGISEGRQGYQSWVTTDNGSVKQR 956
            +              + PF+    +V +++EE  +S G  + + GYQSWV   NG    +
Sbjct: 157  WGMTQNSPKRRVRTKKKPFASTPGNVVMDDEEQEKSKGSRKRKMGYQSWV-AGNGVSVDK 215

Query: 955  GDQRKPSFGGWDELDMRKRVAKGFTKRHSQKVGGPPRSGVDKGKMSRKGRHREAPLLLRL 776
              Q  P FGGWDELD R+ +  G  +R S +  G  +    KGK+S  GR  + PLLLRL
Sbjct: 216  DVQAAPKFGGWDELDGREELGAGSMQRRSARTAGSSQRTPVKGKLSWGGRKGDTPLLLRL 275

Query: 775  LVAVFPFLGSWTRLL 731
            L+AVFPFLGSWT++L
Sbjct: 276  LIAVFPFLGSWTKML 290


>ref|XP_002266422.1| PREDICTED: uncharacterized protein LOC100241669 [Vitis vinifera]
          Length = 287

 Score =  181 bits (460), Expect = 4e-43
 Identities = 113/255 (44%), Positives = 142/255 (55%), Gaps = 5/255 (1%)
 Frame = -1

Query: 1480 WDSNAETFRXXXXXXXXXXXXXXXXXXXXXXXXXFTWRENRKRKWWSDDD---DTQGRNS 1310
            WDSNAET R                            R+  +R WW DD    D  G   
Sbjct: 45   WDSNAETVRTQRFRFNDFVSDDDDDDDEDYEFDFG--RKEEQRTWWFDDSPGIDDDGEFE 102

Query: 1309 VIEDVIDNVW-FFKVLRSFGWLLPAIMISMLIATGPKTFLMALALPLGQAAVSFAIDKVF 1133
              E+ +D     FKV R+FGW+LPAI ISML+ TGP   +MALALPLGQ A+S AIDKV+
Sbjct: 103  FWEESVDGFGVVFKVFRAFGWMLPAIAISMLLGTGPNALIMALALPLGQTALSLAIDKVW 162

Query: 1132 XXXXXXXXXXXXXXRNPFSRAASSVEINEEELVESSGISEGRQGYQSWVTTDNGSVKQRG 953
                          + PFS+AA +  +NEE+  E+    +GR+ Y+SWV   +GSVK  G
Sbjct: 163  GRTSNRPKPRSQTKKKPFSQAARNTRMNEEKRGENKENCKGRETYKSWVGAPDGSVK--G 220

Query: 952  DQRKPSFGGWDELDMRKRVAKGFTKRHSQKV-GGPPRSGVDKGKMSRKGRHREAPLLLRL 776
             +  PSFGGWDELD      +G   +  ++V  GPPR    K K+SR  R+RE PLLLRL
Sbjct: 221  SKTAPSFGGWDELD-----KEGEANKTPRRVPDGPPRQ-QKKSKLSR--RNRETPLLLRL 272

Query: 775  LVAVFPFLGSWTRLL 731
            L+AVFPFLGSW +LL
Sbjct: 273  LIAVFPFLGSWAKLL 287


>gb|ACU20832.1| unknown [Glycine max]
          Length = 293

 Score =  176 bits (446), Expect = 2e-41
 Identities = 111/316 (35%), Positives = 160/316 (50%), Gaps = 10/316 (3%)
 Frame = -1

Query: 1648 LSSPCPTAASLKPSSDKPFLLFFSLTRNPNSYSSNCCCYXXXXXXXXXXXXXXXSYWDSN 1469
            LS P P    L PSS +P LL    + +  S SSN                     WDSN
Sbjct: 19   LSHPLP----LPPSSWRPLLLARPFSPSLVSCSSN-------------------KRWDSN 55

Query: 1468 AETFRXXXXXXXXXXXXXXXXXXXXXXXXXFTWRENRKRKWWSDDDDT----------QG 1319
            AETFR                               +KR+WWSD+D            + 
Sbjct: 56   AETFRPRNFTPNDVRKGQEQERELKEGF-------GKKRRWWSDEDREFEDKEEEVVEET 108

Query: 1318 RNSVIEDVIDNVWFFKVLRSFGWLLPAIMISMLIATGPKTFLMALALPLGQAAVSFAIDK 1139
             + ++ED ID+VWF ++ +S+GW LP I++S LI++GPK FLMAL LPLGQ+A++ A +K
Sbjct: 109  SSGILEDAIDSVWFLQIFKSYGWTLPVILMSWLISSGPKAFLMALILPLGQSALALAFEK 168

Query: 1138 VFXXXXXXXXXXXXXXRNPFSRAASSVEINEEELVESSGISEGRQGYQSWVTTDNGSVKQ 959
            ++              R P  R  + VE   EE  ++      ++GYQSWV  D GSV  
Sbjct: 169  LWGPSERKPKRKYRMRRKPRVRNYTRVEEEPEEKQKT------KKGYQSWVVEDKGSVDT 222

Query: 958  RGDQRKPSFGGWDELDMRKRVAKGFTKRHSQKVGGPPRSGVDKGKMSRKGRHREAPLLLR 779
               +  PSFGGWD+L+  +      T + S+ + G  R+ ++ G++SR+ R  + PLLLR
Sbjct: 223  GSREAAPSFGGWDDLERSRP-----TTKSSRGMDGSRRTSMEGGRLSRRQRKSDTPLLLR 277

Query: 778  LLVAVFPFLGSWTRLL 731
            +L A+FPFLG+WT++L
Sbjct: 278  VLFAIFPFLGTWTKML 293


>ref|XP_003535982.1| PREDICTED: uncharacterized protein LOC100797034 [Glycine max]
          Length = 293

 Score =  175 bits (444), Expect = 3e-41
 Identities = 111/316 (35%), Positives = 159/316 (50%), Gaps = 10/316 (3%)
 Frame = -1

Query: 1648 LSSPCPTAASLKPSSDKPFLLFFSLTRNPNSYSSNCCCYXXXXXXXXXXXXXXXSYWDSN 1469
            LS P P    L PSS +P LL    + +  S SSN                     WDSN
Sbjct: 19   LSHPLP----LPPSSWRPLLLARPFSPSLVSCSSN-------------------KRWDSN 55

Query: 1468 AETFRXXXXXXXXXXXXXXXXXXXXXXXXXFTWRENRKRKWWSDDDDT----------QG 1319
            AETFR                               +KR+WWSD+D            + 
Sbjct: 56   AETFRPRNFTPNDVRKGQEQEQELKEGF-------GKKRRWWSDEDREFEDKEEEVVEET 108

Query: 1318 RNSVIEDVIDNVWFFKVLRSFGWLLPAIMISMLIATGPKTFLMALALPLGQAAVSFAIDK 1139
             + ++ED ID+VWF ++ +S+GW LP I++S LI++GPK FLMAL LPLGQ+A++ A +K
Sbjct: 109  SSGILEDAIDSVWFLQIFKSYGWTLPVILMSWLISSGPKAFLMALILPLGQSALALAFEK 168

Query: 1138 VFXXXXXXXXXXXXXXRNPFSRAASSVEINEEELVESSGISEGRQGYQSWVTTDNGSVKQ 959
            ++              R P  R  + VE   EE  ++      ++GYQSWV  D GSV  
Sbjct: 169  LWGPSERKPKRKYRMRRKPRVRNYTRVEEEPEEKQKT------KKGYQSWVVEDKGSVDT 222

Query: 958  RGDQRKPSFGGWDELDMRKRVAKGFTKRHSQKVGGPPRSGVDKGKMSRKGRHREAPLLLR 779
               +  PSFGGWD+L+  +   K      S+ + G  R+ ++ G++SR+ R  + PLLLR
Sbjct: 223  GSREAAPSFGGWDDLERSRPATKS-----SRGMDGSRRTPMEGGRLSRRQRKSDTPLLLR 277

Query: 778  LLVAVFPFLGSWTRLL 731
            +L A+FPFLG+WT++L
Sbjct: 278  VLFAIFPFLGTWTKML 293


>ref|XP_002315598.1| predicted protein [Populus trichocarpa] gi|222864638|gb|EEF01769.1|
            predicted protein [Populus trichocarpa]
          Length = 333

 Score =  168 bits (426), Expect = 3e-39
 Identities = 99/293 (33%), Positives = 145/293 (49%)
 Frame = -1

Query: 1609 SSDKPFLLFFSLTRNPNSYSSNCCCYXXXXXXXXXXXXXXXSYWDSNAETFRXXXXXXXX 1430
            +++KP+  F+S     + YS+   C                  WD NAET R        
Sbjct: 73   AAEKPYFFFYS-----HCYSTTTRCSSNNR-------------WDPNAETRRFNFKFKFR 114

Query: 1429 XXXXXXXXXXXXXXXXXFTWRENRKRKWWSDDDDTQGRNSVIEDVIDNVWFFKVLRSFGW 1250
                                 + RKR+WWSD ++      ++E+ ID++W  ++ +S+GW
Sbjct: 115  DKNVDSVQVEEDEKGGSTRKGKKRKRRWWSDQEEEPP--GILEEAIDSLWVLQLAKSYGW 172

Query: 1249 LLPAIMISMLIATGPKTFLMALALPLGQAAVSFAIDKVFXXXXXXXXXXXXXXRNPFSRA 1070
            + P I+I+ L+ATGPK FLM LAL +GQ+A++FA  K+               R      
Sbjct: 173  MFPPIVITSLLATGPKAFLMVLALSVGQSALTFAFQKLLGKTQSKPKRKVRKRRKTTGNT 232

Query: 1069 ASSVEINEEELVESSGISEGRQGYQSWVTTDNGSVKQRGDQRKPSFGGWDELDMRKRVAK 890
             +  +I++EE  +  G  +GR GY+SWV  DNGS   + +Q  P+FGGWDE D       
Sbjct: 233  VNDADIDDEE-QDKEGAVKGRMGYRSWVVDDNGSF-NKDNQDAPNFGGWDEFDATA---- 286

Query: 889  GFTKRHSQKVGGPPRSGVDKGKMSRKGRHREAPLLLRLLVAVFPFLGSWTRLL 731
                   Q+   P +  +  GK S  GR  + PLLLRLL+AVFPFLGSWT++L
Sbjct: 287  ------PQRKRQPRKKPLANGKWSMSGRKSDTPLLLRLLIAVFPFLGSWTKML 333


Top