BLASTX nr result

ID: Coptis24_contig00017112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017112
         (1298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-27
ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|2...   107   4e-27
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...   107   9e-27
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...   106   1e-26
ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|2...   104   3e-23

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score =  108 bits (269), Expect(2) = 2e-27
 Identities = 56/170 (32%), Positives = 88/170 (51%)
 Frame = +1

Query: 412 DAMYTFKFENDEERQSVLDIGSFHIASHLFVVRPWKTFVEAEARELRTIPIWVVVKGLPM 591
           +  + F F++ +   +VL+   +H+A+   V++ W+  ++    +L  +P+WV +  +P+
Sbjct: 192 NGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPL 251

Query: 592 EMWNKDGFSQVGSAVGIPMFTDRLTENMSRTNYARVCVEIDTDCPYPDDIPVILDQRRAY 771
           E W   G S V SAVG+P+  D  T    R +YARVCVEID       +  +        
Sbjct: 252 EYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFI 311

Query: 772 KVSFEYNWKPPKCSSCKVFGHSDHKCPKEDIMNTKKVWLQKTCDGKKEEG 921
            +S EY W P KCS+C VFGH+   C   +I N K V      +GK+  G
Sbjct: 312 TISAEYEWIPSKCSNCNVFGHTTALCATNNIDNLKVV-----AEGKRNLG 356



 Score = 41.6 bits (96), Expect(2) = 2e-27
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
 Frame = +2

Query: 35  ADQKTSLGEKH---QASNDTTSLAEMLGSNV--IDAGNTNKEPMRLK-----------SS 166
           AD   S+ E H   QASN    +  +LGS V  +  G+  +E ++ +           S 
Sbjct: 49  ADSDVSI-ENHSTVQASNVVPEMNHVLGSKVDEVKVGSHQQEQLKPRPKLNFLTALKGSD 107

Query: 167 WADVMGKKSVGSAA---LSYIPTATVNGKPVIHVTSEQFSEYNKKFENLVVGYFVGRRLN 337
             D  G K++G ++   L + P  T +G+  +    + F +  + +++ +VG+FVG++L 
Sbjct: 108 VDDNEGSKTLGISSVRNLHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLP 167

Query: 338 YNYVKDVVSRI 370
           Y  V  +  RI
Sbjct: 168 YPVVNSIAKRI 178


>ref|XP_002317320.1| predicted protein [Populus trichocarpa] gi|222860385|gb|EEE97932.1|
           predicted protein [Populus trichocarpa]
          Length = 761

 Score =  107 bits (266), Expect(2) = 4e-27
 Identities = 55/170 (32%), Positives = 88/170 (51%)
 Frame = +1

Query: 412 DAMYTFKFENDEERQSVLDIGSFHIASHLFVVRPWKTFVEAEARELRTIPIWVVVKGLPM 591
           +  + F F++ +   +VL+   +H+A+   V++ W+  ++    +L  +P+WV +  +P+
Sbjct: 192 NGFFIFNFDSVDRATNVLERAPWHMANMPLVLKRWQPNMQFLKDDLARVPVWVWLYNVPL 251

Query: 592 EMWNKDGFSQVGSAVGIPMFTDRLTENMSRTNYARVCVEIDTDCPYPDDIPVILDQRRAY 771
           E W   G S V SA+G+P+  D  T    R +YARVCVEID       +  +        
Sbjct: 252 EYWTIKGLSCVASAIGVPLHADHTTFLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFI 311

Query: 772 KVSFEYNWKPPKCSSCKVFGHSDHKCPKEDIMNTKKVWLQKTCDGKKEEG 921
            +S EY W P KCS+C VFGH+   C   +I N K V      +GK+  G
Sbjct: 312 TISAEYEWIPSKCSNCNVFGHTRTLCATNNINNLKVV-----AEGKRNLG 356



 Score = 42.0 bits (97), Expect(2) = 4e-27
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
 Frame = +2

Query: 35  ADQKTSLGEKH---QASNDTTSLAEMLGSNV--IDAGNTNKEPMRLK-----------SS 166
           AD   S+ EKH   QASN    +   LGS V  +  G+  +E ++L+           S 
Sbjct: 49  ADSDVSI-EKHSIVQASNVVPEMNHALGSKVDEVKVGSHQQEQLKLRPKLNFLNALKGSD 107

Query: 167 WADVMGKKSVGSAA---LSYIPTATVNGKPVIHVTSEQFSEYNKKFENLVVGYFVGRRLN 337
             D  G K++G ++   L + P    +G+  +    + F +  + +++ +VG+F+G++L 
Sbjct: 108 VDDNEGSKTLGISSVRNLHFAPPTMTDGRVTVAPPLDVFEDGCEFWKSTLVGHFMGQKLP 167

Query: 338 YNYVKDVVSRI 370
           Y  V  +  RI
Sbjct: 168 YPVVNSIAKRI 178


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score =  107 bits (266), Expect(2) = 9e-27
 Identities = 56/170 (32%), Positives = 87/170 (51%)
 Frame = +1

Query: 412 DAMYTFKFENDEERQSVLDIGSFHIASHLFVVRPWKTFVEAEARELRTIPIWVVVKGLPM 591
           +  + F F+  +   +VL+   +H+A+   V++ W+  ++    +L  +P+WV +  +P+
Sbjct: 192 NGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPL 251

Query: 592 EMWNKDGFSQVGSAVGIPMFTDRLTENMSRTNYARVCVEIDTDCPYPDDIPVILDQRRAY 771
           E W   G S V SAVG+P+  D  T    R +YARVCVEID       +  +        
Sbjct: 252 EYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFI 311

Query: 772 KVSFEYNWKPPKCSSCKVFGHSDHKCPKEDIMNTKKVWLQKTCDGKKEEG 921
            +S EY W P KCS+C VFGH+   C   +I N K V      +GK+  G
Sbjct: 312 TISAEYEWIPSKCSNCNVFGHTTALCATNNIDNLKVV-----AEGKRNLG 356



 Score =  107 bits (266), Expect(2) = 9e-27
 Identities = 56/170 (32%), Positives = 87/170 (51%)
 Frame = +1

Query: 412  DAMYTFKFENDEERQSVLDIGSFHIASHLFVVRPWKTFVEAEARELRTIPIWVVVKGLPM 591
            +  + F F+  +   +VL+   +H+A+   V++ W+  ++    +L  +P+WV +  +P+
Sbjct: 985  NGFFIFNFDYVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPL 1044

Query: 592  EMWNKDGFSQVGSAVGIPMFTDRLTENMSRTNYARVCVEIDTDCPYPDDIPVILDQRRAY 771
            E W   G S V SAVG+P+  D  T    R +YARVCVEID       +  +        
Sbjct: 1045 EYWTIKGLSCVASAVGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFI 1104

Query: 772  KVSFEYNWKPPKCSSCKVFGHSDHKCPKEDIMNTKKVWLQKTCDGKKEEG 921
             +S EY W P KCS+C VFGH+   C   +I N K V      +GK+  G
Sbjct: 1105 TISAEYEWIPSKCSNCNVFGHTTALCATNNIDNLKVV-----AEGKRNLG 1149



 Score = 40.8 bits (94), Expect(2) = 9e-27
 Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
 Frame = +2

Query: 35  ADQKTSLGEKH---QASNDTTSLAEMLGSNV--IDAGNTNKEPMRLK-----------SS 166
           AD   S+ E H   QASN    +  +LGS V  +  G+  +E ++ +           S 
Sbjct: 49  ADSDVSI-ENHSTVQASNVVPEMNHVLGSKVDEVKVGSHQQEQLKPRPKLNFLTALKGSD 107

Query: 167 WADVMGKKSVGSAA---LSYIPTATVNGKPVIHVTSEQFSEYNKKFENLVVGYFVGRRLN 337
             D  G K++G ++   + + P  T +G+  +    + F +  + +++ +VG+FVG++L 
Sbjct: 108 VDDNEGSKTLGISSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLP 167

Query: 338 YNYVKDVVSRI 370
           Y  V  +  RI
Sbjct: 168 YPVVNSIAKRI 178



 Score = 40.8 bits (94), Expect(2) = 9e-27
 Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
 Frame = +2

Query: 35   ADQKTSLGEKH---QASNDTTSLAEMLGSNV--IDAGNTNKEPMRLK-----------SS 166
            AD   S+ E H   QASN    +  +LGS V  +  G+  +E ++ +           S 
Sbjct: 842  ADSDVSI-ENHSTVQASNVVPEMNHVLGSKVDEVKVGSHQQEQLKPRPKLNFLTALKGSD 900

Query: 167  WADVMGKKSVGSAA---LSYIPTATVNGKPVIHVTSEQFSEYNKKFENLVVGYFVGRRLN 337
              D  G K++G ++   + + P  T +G+  +    + F +  + +++ +VG+FVG++L 
Sbjct: 901  VDDNEGSKTLGISSVRNMHFAPPTTTDGRVTVAPPLDVFEDGCEFWKSTLVGHFVGQKLP 960

Query: 338  YNYVKDVVSRI 370
            Y  V  +  RI
Sbjct: 961  YPVVNSIAKRI 971


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score =  106 bits (264), Expect(2) = 1e-26
 Identities = 54/170 (31%), Positives = 87/170 (51%)
 Frame = +1

Query: 412 DAMYTFKFENDEERQSVLDIGSFHIASHLFVVRPWKTFVEAEARELRTIPIWVVVKGLPM 591
           +  + F F++ +   +VL+   +H+A+   V++ W+  ++    +   +P+WV +  +P+
Sbjct: 192 NGFFIFNFDSVDHATNVLERAPWHMANRPLVLKRWQPNMQFLKDDFARVPVWVRLYNVPL 251

Query: 592 EMWNKDGFSQVGSAVGIPMFTDRLTENMSRTNYARVCVEIDTDCPYPDDIPVILDQRRAY 771
           E W   G S V SA+G+P+  D  T    R +YARVCVEID       +  +        
Sbjct: 252 EYWTIKGLSCVASAIGVPLHADHTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFI 311

Query: 772 KVSFEYNWKPPKCSSCKVFGHSDHKCPKEDIMNTKKVWLQKTCDGKKEEG 921
            +S EY W P KCS+C VFGH+   C   +I N K V      +GK+  G
Sbjct: 312 TISAEYEWIPSKCSNCNVFGHTTALCATNNIDNLKVV-----AEGKRNLG 356



 Score = 41.2 bits (95), Expect(2) = 1e-26
 Identities = 35/131 (26%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
 Frame = +2

Query: 35  ADQKTSLGEKH---QASNDTTSLAEMLGSNV--IDAGNTNKEPMRLK-----------SS 166
           AD   S+ E H   QASN    +  +LGS V  +  G+  +E ++L+           S 
Sbjct: 49  ADSDVSI-ENHSTIQASNVVPEMNHVLGSKVDEVKVGSHQQEQLKLRPKLNFLTALKGSD 107

Query: 167 WADVMGKKSVGSAA---LSYIPTATVNGKPVIHVTSEQFSEYNKKFENLVVGYFVGRRLN 337
             D  G K++G ++   L + P    +G+  +    + F +  + +++ +VG+FVG++L 
Sbjct: 108 VDDNEGSKTLGISSVRNLHFAPPTMTDGRVKVAPPLDVFEDGCEFWKSTLVGHFVGQKLP 167

Query: 338 YNYVKDVVSRI 370
           Y  V  +  RI
Sbjct: 168 YPVVNSIAKRI 178


>ref|XP_002333857.1| predicted protein [Populus trichocarpa] gi|222838784|gb|EEE77135.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  104 bits (260), Expect(2) = 3e-23
 Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 4/157 (2%)
 Frame = +1

Query: 397 MKPYGDAMYTFKFENDEERQSVLDIGS---FHIASHLFVVRPWKTFVEAEARELRTIPIW 567
           +K Y      F  + +     VL +G    F+  S  F+++PW   +  E +EL++ P+W
Sbjct: 69  VKVYSQGSGVFVLDFESAHGKVLALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPVW 128

Query: 568 VVVKGLPMEMWNKDGFSQVGSAVGIPMFTDRLTENMSRTNYARVCVEIDTDCPYPDDIPV 747
           + +  L + +W+ +  S++ S VG P+F D +T +     +ARVCVE+D D   PD + +
Sbjct: 129 IKLPNLRLHLWSPEALSKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTI 188

Query: 748 ILDQRRAYKVSFEYNWKP-PKCSSCKVFGHSDHKCPK 855
             D+  +Y    EY W+P  +CS C   GHSD  CP+
Sbjct: 189 EDDKGYSYDQKVEYEWQPTSRCSYCLHLGHSD-SCPR 224



 Score = 31.2 bits (69), Expect(2) = 3e-23
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 209 LSYIPTATVNGKPVIHVTSEQFSEYNKKFENLVVGYFVG 325
           L ++     NGK +  V  E  +   K++EN VV YF+G
Sbjct: 3   LKFVEPVAKNGKELALVNGEDVASEFKRWENAVVAYFLG 41


Top