BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017109
         (807 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612614.1| hypothetical protein MTR_5g026940 [Medicago ...    88   1e-20
ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula] g...    67   3e-20
ref|XP_003547252.1| PREDICTED: putative ribonuclease H protein A...    94   4e-17
ref|XP_002531653.1| conserved hypothetical protein [Ricinus comm...    90   5e-16
gb|ABN08954.1| Ribonuclease H [Medicago truncatula]                    63   9e-16

>ref|XP_003612614.1| hypothetical protein MTR_5g026940 [Medicago truncatula]
           gi|355513949|gb|AES95572.1| hypothetical protein
           MTR_5g026940 [Medicago truncatula]
          Length = 323

 Score = 87.8 bits (216), Expect(2) = 1e-20
 Identities = 47/118 (39%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
 Frame = -3

Query: 580 FYIN*ESHFTGRPACAIRIIEVRWYPPLLSWVKVNTDGAAHSSPGHSSCGAIFKNSRG-- 407
           F+I    + +  P  A +IIEV W PP+ +W+K NTDG    S G  +C  IF+N  G  
Sbjct: 84  FFILKAFNVSNHPQKAPKIIEVLWQPPIFNWIKCNTDGTTLGSHGQDACAGIFRNCNGDN 143

Query: 406 FAKGCFTAYLGI*NSMFAELMGVILAIEEADRRGWNKLWLECDSKLTLHCILNSQSVP 233
           F   C   +  I N++ A +MGVILAIE      W+ L +ECDSKL      +   VP
Sbjct: 144 FGMFCPQPWHIISNALIAGIMGVILAIETTHNNNWHHLLIECDSKLATLAFKSPHIVP 201



 Score = 38.1 bits (87), Expect(2) = 1e-20
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = -1

Query: 222 TRWRNCLLIVSRMEFRYSHIYREGNRVADML 130
           TRW  CL ++S M F  SHI+RE N  A+ L
Sbjct: 206 TRWNKCLHLLSSMNFMISHIFREDNNCANKL 236


>ref|XP_003605652.1| GDSL esterase/lipase [Medicago truncatula]
           gi|355506707|gb|AES87849.1| GDSL esterase/lipase
           [Medicago truncatula]
          Length = 1004

 Score = 67.4 bits (163), Expect(2) = 3e-20
 Identities = 35/105 (33%), Positives = 51/105 (48%)
 Frame = -3

Query: 541 ACAIRIIEVRWYPPLLSWVKVNTDGAAHSSPGHSSCGAIFKNSRGFAKGCFTAYLGI*NS 362
           A  + II   WY     W+K NTDGA  S+   SSCG +F++       CF   LG  ++
Sbjct: 215 ATIVNIISTIWYNRNQRWIKFNTDGA--STATSSSCGGVFRDQNANFLSCFAKNLGGGSA 272

Query: 361 MFAELMGVILAIEEADRRGWNKLWLECDSKLTLHCILNSQSVPWR 227
              EL  ++  +E A +R W  +W+E DS L +        +P R
Sbjct: 273 YQPELAAIMRVVEIAYQRNWRNIWIESDSALVVMAFKKMSMIPCR 317



 Score = 57.4 bits (137), Expect(2) = 3e-20
 Identities = 28/65 (43%), Positives = 41/65 (63%)
 Frame = -1

Query: 219 RWRNCLLIVSRMEFRYSHIYREGNRVADMLPNNGLRSKPVFSWWPSVPNFIGREIIHDMN 40
           RW NC  ++ RM F  +HIYRE NR AD L + GL  + V + W ++P+FI   +IHD  
Sbjct: 321 RWINCRKLLCRMNFVITHIYREDNRCADKLASKGLDIEGV-TIWLNMPDFINNFVIHDRL 379

Query: 39  GLSNY 25
           G+ ++
Sbjct: 380 GMCDH 384


>ref|XP_003547252.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 193

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 44/80 (55%), Positives = 51/80 (63%)
 Frame = -3

Query: 505 PPLLSWVKVNTDGAAHSSPGHSSCGAIFKNSRGFAKGCFTAYLGI*NSMFAELMGVILAI 326
           P +  W K NTDGA   +PG + CG IFKN R    GCF   LG  NS+F EL  VILAI
Sbjct: 43  PLIQGWTKCNTDGAVKGNPGTAGCGDIFKNERTCVLGCFVLNLGTQNSLFVELTSVILAI 102

Query: 325 EEADRRGWNKLWLECDSKLT 266
               ++ WNKLWLECDS+LT
Sbjct: 103 GLTAKKNWNKLWLECDSELT 122


>ref|XP_002531653.1| conserved hypothetical protein [Ricinus communis]
           gi|223528711|gb|EEF30723.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 160

 Score = 90.1 bits (222), Expect = 5e-16
 Identities = 48/121 (39%), Positives = 64/121 (52%), Gaps = 1/121 (0%)
 Frame = -3

Query: 589 TCQFYIN*ESHFTGRPACAIRIIEVRWYPPLLSWVKVNTDGAAHSSPGHSSCGAIFKNSR 410
           T +F I    H  G+P+ A  II V W    L W+KVNTD +A  SP  +S G IF+ SR
Sbjct: 40  TSKFQILKSLHIAGKPSGAPSIISVFWRSSPLVWIKVNTDRSAFGSPRSASLGGIFEISR 99

Query: 409 GFAKGCFTAYLGI*NSMFAELMGVILAIEEADRRGWNKLWLECDSKLTLHCILN-SQSVP 233
           G+  GCF   +    +  AEL   +  + +A   GW +LWLECDS   +H   N    +P
Sbjct: 100 GYPAGCFVFSICNSFAHIAELCAAMFVVLKAKEFGWRQLWLECDSMYVVHLFKNIDMLIP 159

Query: 232 W 230
           W
Sbjct: 160 W 160


>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
          Length = 175

 Score = 62.8 bits (151), Expect(2) = 9e-16
 Identities = 33/97 (34%), Positives = 51/97 (52%)
 Frame = -3

Query: 517 VRWYPPLLSWVKVNTDGAAHSSPGHSSCGAIFKNSRGFAKGCFTAYLGI*NSMFAELMGV 338
           +R  P +   VK+N DG+A  +P   + G +F+N +  + G F   +G      AEL   
Sbjct: 1   MRISPAVQGRVKINLDGSAFGAPSCGATGGVFRNWQTHSLGGFAQNIGHATCFKAELCAA 60

Query: 337 ILAIEEADRRGWNKLWLECDSKLTLHCILNSQSVPWR 227
           I AIE++       +WLE DSKL +    +S+ VPW+
Sbjct: 61  IFAIEKSIEYNLRDIWLETDSKLVVKAFSSSEHVPWQ 97



 Score = 47.0 bits (110), Expect(2) = 9e-16
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -1

Query: 222 TRWRNCLLIVSRMEFRYSHIYREGNRVADMLPNNGLRSKPVFS-WWPSVPNF 70
           TRW NCL +  +++   +HI+REGN  AD L  NG     + S WW S P F
Sbjct: 100 TRWNNCLALAQKIKCVCTHIHREGNAGADSLAKNGKSLALLTSQWWSSSPLF 151