BLASTX nr result

ID: Coptis24_contig00017101 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017101
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29820.3| unnamed protein product [Vitis vinifera]              156   4e-36
ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257...   156   4e-36
ref|XP_002533439.1| conserved hypothetical protein [Ricinus comm...   147   2e-33
ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
ref|XP_003535869.1| PREDICTED: uncharacterized protein LOC100775...   139   5e-31

>emb|CBI29820.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  156 bits (394), Expect = 4e-36
 Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
 Frame = +2

Query: 311 CRWFVTPSGLIPSQPTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLEXXXXXXXXVK 490
           CRW   P+ L  + P+LGRKVTGTLFG+++GHV+F VQ+DPRS+PV +LE        VK
Sbjct: 97  CRWLSIPNHLSIT-PSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELATSTSTLVK 155

Query: 491 EMSSGLVRIALEC-KIGT--RPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHALSTVQ 661
           EMSSGLVRIALEC K+    RP+KLFQEP+WTMY NG+K GYAMSR CGE++ H LSTVQ
Sbjct: 156 EMSSGLVRIALECEKVAARGRPVKLFQEPMWTMYCNGRKCGYAMSRECGEFDRHVLSTVQ 215

Query: 662 TVS 670
           +VS
Sbjct: 216 SVS 218


>ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257201 [Vitis vinifera]
          Length = 262

 Score =  156 bits (394), Expect = 4e-36
 Identities = 79/123 (64%), Positives = 96/123 (78%), Gaps = 3/123 (2%)
 Frame = +2

Query: 311 CRWFVTPSGLIPSQPTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLEXXXXXXXXVK 490
           CRW   P+ L  + P+LGRKVTGTLFG+++GHV+F VQ+DPRS+PV +LE        VK
Sbjct: 80  CRWLSIPNHLSIT-PSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELATSTSTLVK 138

Query: 491 EMSSGLVRIALEC-KIGT--RPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHALSTVQ 661
           EMSSGLVRIALEC K+    RP+KLFQEP+WTMY NG+K GYAMSR CGE++ H LSTVQ
Sbjct: 139 EMSSGLVRIALECEKVAARGRPVKLFQEPMWTMYCNGRKCGYAMSRECGEFDRHVLSTVQ 198

Query: 662 TVS 670
           +VS
Sbjct: 199 SVS 201


>ref|XP_002533439.1| conserved hypothetical protein [Ricinus communis]
           gi|223526713|gb|EEF28946.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 276

 Score =  147 bits (370), Expect = 2e-33
 Identities = 75/126 (59%), Positives = 92/126 (73%), Gaps = 6/126 (4%)
 Frame = +2

Query: 311 CRWFVTPSGLIPSQPTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLEXXXXXXXXVK 490
           C+W   P+ L   + +LGRKVTGTLFG+++GHV+F VQ+DPRS+PV +LE        VK
Sbjct: 91  CKWLSIPTHL-SIKSSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELAMSTSTLVK 149

Query: 491 EMSSGLVRIALEC-KI-----GTRPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHALS 652
           EMSSGLVRIALEC K+     GTR  KLF EP WTMY NG+K GYA+SR C E +WH L+
Sbjct: 150 EMSSGLVRIALECDKVQVPTNGTRSGKLFNEPTWTMYCNGRKCGYAVSRTCTELDWHVLN 209

Query: 653 TVQTVS 670
           TVQ+VS
Sbjct: 210 TVQSVS 215


>ref|XP_002308021.1| predicted protein [Populus trichocarpa] gi|222853997|gb|EEE91544.1|
           predicted protein [Populus trichocarpa]
          Length = 215

 Score =  141 bits (356), Expect = 1e-31
 Identities = 72/127 (56%), Positives = 88/127 (69%), Gaps = 7/127 (5%)
 Frame = +2

Query: 311 CRWFVTPSGLIPSQPTLGRKVTGTLFGYKKGHVTFTVQEDPRSDPVFVLEXXXXXXXXVK 490
           C+W  TP+  +   P+LGRKVTGTLFG + GHV+F VQ+DP S+PV +LE        VK
Sbjct: 28  CKWLSTPTQYLSLTPSLGRKVTGTLFGNRHGHVSFAVQDDPGSEPVLLLELSISTAMLVK 87

Query: 491 EMSSGLVRIALEC------KIGT-RPMKLFQEPIWTMYFNGKKFGYAMSRACGEYEWHAL 649
           EMSSGLVRIALEC      ++ T RP KLF EP WTMY NG+K GYA+SR C   +W+ L
Sbjct: 88  EMSSGLVRIALECEKVRAPQVQTGRPGKLFNEPTWTMYCNGRKCGYAVSRRCTYSDWYVL 147

Query: 650 STVQTVS 670
            TVQ+VS
Sbjct: 148 GTVQSVS 154


>ref|XP_003535869.1| PREDICTED: uncharacterized protein LOC100775417 [Glycine max]
          Length = 296

 Score =  139 bits (350), Expect = 5e-31
 Identities = 80/169 (47%), Positives = 99/169 (58%), Gaps = 15/169 (8%)
 Frame = +2

Query: 209 QNQTSLSQPNKPKPITKLAXXXXXXXXXXXXXXXCRWFVTPSGLIPSQPTLGRKVTGTLF 388
           Q+   L+Q NK   I+ L                C+W   PS L  + P+LGRKVTGTLF
Sbjct: 66  QHTPKLTQQNK---ISSLIRSFLNIFTFPTMIPTCKWLTIPSQLSVT-PSLGRKVTGTLF 121

Query: 389 GYKKGHVTFTVQEDPRSDPVFVLEXXXXXXXXVKEMSSGLVRIALE-----CKIGTRPM- 550
           G+++GH++F VQ  PR+DPV +LE        VKEMSSGLVRIALE         TR M 
Sbjct: 122 GHRRGHISFAVQLHPRADPVLLLELAMSTSSLVKEMSSGLVRIALESQKLSASTITRTMR 181

Query: 551 ---------KLFQEPIWTMYFNGKKFGYAMSRACGEYEWHALSTVQTVS 670
                    KLFQEP WTMY NG+  GYA+SR CG+ +WH LST+Q+VS
Sbjct: 182 SNSGRQQQCKLFQEPSWTMYCNGRNCGYAVSRTCGDLDWHVLSTIQSVS 230


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