BLASTX nr result

ID: Coptis24_contig00017096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017096
         (805 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263686.1| PREDICTED: uncharacterized protein LOC100251...   134   2e-29
ref|XP_002533995.1| conserved hypothetical protein [Ricinus comm...   129   6e-28
ref|XP_003546382.1| PREDICTED: uncharacterized protein LOC100787...   129   7e-28
ref|XP_003534854.1| PREDICTED: uncharacterized protein LOC100795...   122   7e-26
ref|XP_004134511.1| PREDICTED: uncharacterized protein LOC101220...   120   3e-25

>ref|XP_002263686.1| PREDICTED: uncharacterized protein LOC100251363 [Vitis vinifera]
          Length = 526

 Score =  134 bits (337), Expect = 2e-29
 Identities = 84/234 (35%), Positives = 103/234 (44%), Gaps = 12/234 (5%)
 Frame = +3

Query: 138 FVGVVWNCAAEIKILLLTLIFICSLATVXXXXXXXXXXXXXXXXXXXXKFSSLQEEQQVA 317
           FVG V NC AE+KILL  L+ +C++AT+                      SS       +
Sbjct: 13  FVGFVRNCMAELKILLTALLLLCTIATLVQFLPPRFSFSPSDLRNCLSAISSSSSSSNSS 72

Query: 318 ------PSSLFILXXXXXXXXXXLQXXXXXXXXXXXXXXDGGFVKRVFNPYGPVVYTFIQ 479
                 P                L               DGG +KR FNPYG   Y F+ 
Sbjct: 73  QKVTSPPLPHPSPPASDPPSPPPLPPPPSIQQQQKDQILDGGIIKRAFNPYGAAAYNFVL 132

Query: 480 MGTYRGGLNSFAVVGLASKSLHLYGKPSYQCEWL------XXXXXXXXXXXXFGSKILPD 641
           M  YRGGLN+FAVVGLASK LHL+G P+YQCEW+                   G KILPD
Sbjct: 133 MSAYRGGLNTFAVVGLASKPLHLFGNPTYQCEWVPQSNQTQQQQQMPPSISTRGYKILPD 192

Query: 642 WGYGRXXXXXXXXXXXXXXXXXXXXXXRLVVHASTGGGGDRAVDSIEKIEALRE 803
           WGYGR                      +L++HAST GGGDR ++  + IEAL E
Sbjct: 193 WGYGRVYTVVVVNCTFPVAVGQNGSGGQLLLHASTSGGGDRDLNVTDTIEALIE 246


>ref|XP_002533995.1| conserved hypothetical protein [Ricinus communis]
           gi|223526015|gb|EEF28392.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 520

 Score =  129 bits (325), Expect = 6e-28
 Identities = 76/226 (33%), Positives = 101/226 (44%), Gaps = 3/226 (1%)
 Frame = +3

Query: 135 MFVGVVWNCAAEIKILLLTLIFICSLATVXXXXXXXXXXXXXXXXXXXXKFSSLQEEQQV 314
           MF+GVV NCAAE+K+LL  L+ +C++AT+                    + ++       
Sbjct: 20  MFIGVVMNCAAELKLLLTALLILCTIATLLQFLPSRFTISTSDLRFCISRITTTTTTTTT 79

Query: 315 APSSLFILXXXXXXXXXXLQXXXXXXXXXXXXXXDGGFVKRVFNPYGPVVYTFIQMGTYR 494
             S   I                             G VKR F P+G   Y FI MG YR
Sbjct: 80  TTS---IALPLNSSSVSPQSSPPSSLQQPEEQLPPNGTVKRAFYPHGAAAYNFIAMGAYR 136

Query: 495 GGLNSFAVVGLASKSLHLYGKPSYQCEWLXXXXXXXXXXXXFGS---KILPDWGYGRXXX 665
           GG ++FA+VGL+SK LHLY KP+YQCEW+              +   KILPDWGYGR   
Sbjct: 137 GGFDTFAIVGLSSKPLHLYAKPTYQCEWVPHKNSSSGGSDPITAVAYKILPDWGYGRVYT 196

Query: 666 XXXXXXXXXXXXXXXXXXXRLVVHASTGGGGDRAVDSIEKIEALRE 803
                              +L +HAST GGGDR  +  ++ E L+E
Sbjct: 197 VVVVNCTFAQPINSDNSGGKLFLHASTSGGGDRDFNITDRFEVLQE 242


>ref|XP_003546382.1| PREDICTED: uncharacterized protein LOC100787815 [Glycine max]
          Length = 515

 Score =  129 bits (324), Expect = 7e-28
 Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
 Frame = +3

Query: 135 MFVGVVWNCAAEIKILLLTLIFICSLATVXXXXXXXXXXXXXXXXXXXXKFSSL-----Q 299
           ++V V+ N AAE+K+LL TL+ +C++AT+                    + +        
Sbjct: 9   LYVAVLGNYAAELKLLLTTLLLLCAVATLLQFLPSRFTISASDLRVCISRVTQTTPTLSN 68

Query: 300 EEQQVAPSSLFILXXXXXXXXXXLQXXXXXXXXXXXXXXDGGFVKRVFNPYGPVVYTFIQ 479
                +P +  ++                            G +KRVFNPYG   Y FI 
Sbjct: 69  STNATSPPAPPLVASLSSPTTSPPPPPPPPPPPPSEQVLPDGTIKRVFNPYGSAAYNFIT 128

Query: 480 MGTYRGGLNSFAVVGLASKSLHLYGKPSYQCEWLXXXXXXXXXXXXFGSKILPDWGYGRX 659
           MG YRGGLN+FA++G+ASK LH+Y KP+Y+C W              G KILPDWGYG  
Sbjct: 129 MGAYRGGLNTFAIIGIASKPLHVYAKPTYECAWFSLAGDNKKVSSTVGYKILPDWGYGHV 188

Query: 660 XXXXXXXXXXXXXXXXXXXXXRLVVHASTGGGGDRAVDSIEKIEALRE 803
                                +LV+ AST GGGD + ++ ++IEAL E
Sbjct: 189 YTVVIVNCTFPEPLNADNSGGKLVLFASTSGGGDASFNTTDRIEALTE 236


>ref|XP_003534854.1| PREDICTED: uncharacterized protein LOC100795606 [Glycine max]
          Length = 527

 Score =  122 bits (307), Expect = 7e-26
 Identities = 57/127 (44%), Positives = 74/127 (58%)
 Frame = +3

Query: 423 GFVKRVFNPYGPVVYTFIQMGTYRGGLNSFAVVGLASKSLHLYGKPSYQCEWLXXXXXXX 602
           G +KRVFNPYG   Y F+ MG YRGGL++FA++G+ASK LH+Y KP+Y+C W        
Sbjct: 122 GTIKRVFNPYGSAAYNFVTMGAYRGGLDTFAIIGIASKPLHVYAKPTYECAWFSLAGDKK 181

Query: 603 XXXXXFGSKILPDWGYGRXXXXXXXXXXXXXXXXXXXXXXRLVVHASTGGGGDRAVDSIE 782
                 G KILPDWGYGR                      +LV+ AST GGGD + ++ +
Sbjct: 182 KLSTTVGYKILPDWGYGRVYTVVIVNCTFPIPVNADNSGGKLVLFASTSGGGDASFNTTD 241

Query: 783 KIEALRE 803
           +IEAL E
Sbjct: 242 RIEALTE 248


>ref|XP_004134511.1| PREDICTED: uncharacterized protein LOC101220016 [Cucumis sativus]
           gi|449515589|ref|XP_004164831.1| PREDICTED:
           uncharacterized LOC101220016 [Cucumis sativus]
          Length = 499

 Score =  120 bits (302), Expect = 3e-25
 Identities = 76/225 (33%), Positives = 104/225 (46%), Gaps = 2/225 (0%)
 Frame = +3

Query: 135 MFVGVVWNCAAEIKILLLTLIFICSLATVXXXXXXXXXXXXXXXXXXXXKFSSLQE--EQ 308
           M+VGV++N AAE+K+ L  L+ +C+LAT+                      S L+     
Sbjct: 9   MYVGVIFNYAAELKLFLSALLLLCALATLLQFLPSRFTL----------SISDLRSCSAT 58

Query: 309 QVAPSSLFILXXXXXXXXXXLQXXXXXXXXXXXXXXDGGFVKRVFNPYGPVVYTFIQMGT 488
           Q +PSS  +                             G ++R F+PYG   Y FI MG 
Sbjct: 59  QDSPSSA-LSATLHSSTPTPTPTPSPSPYLPTDQLLPNGVLRRSFHPYGAAAYNFITMGA 117

Query: 489 YRGGLNSFAVVGLASKSLHLYGKPSYQCEWLXXXXXXXXXXXXFGSKILPDWGYGRXXXX 668
           YRGGL +FA+VGLASK LH++G P+YQC+W+               KILPDWGYGR    
Sbjct: 118 YRGGLQNFAIVGLASKPLHVFGHPTYQCQWIPRLQPSNPINAS-AFKILPDWGYGRVYTV 176

Query: 669 XXXXXXXXXXXXXXXXXXRLVVHASTGGGGDRAVDSIEKIEALRE 803
                             +L+++AST GGGDR  +  + IE L E
Sbjct: 177 VVVNCTFSHPVNADNQGGKLLLYASTSGGGDRNFNLTDTIEVLTE 221


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