BLASTX nr result

ID: Coptis24_contig00017092 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017092
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|2...    62   7e-08
emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]    62   7e-08
ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264...    61   1e-07
ref|XP_002527364.1| conserved hypothetical protein [Ricinus comm...    59   6e-07

>ref|XP_002307329.1| predicted protein [Populus trichocarpa] gi|222856778|gb|EEE94325.1|
           predicted protein [Populus trichocarpa]
          Length = 329

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 33/122 (27%), Positives = 63/122 (51%)
 Frame = -1

Query: 379 ETWNVKVDTAQCQHKTCKWERAENGISNLNSDGSLQGMNGGWAAVARDGNGQVIVASKGR 200
           ETW+  +       + C+W+R + G   LN+DGS+   N G   + RD  G  I     +
Sbjct: 149 ETWSDLLGPVARSIRWCQWKRPDFGWIKLNTDGSIDSENAGIGGLFRDYEGNAICGFVSK 208

Query: 199 SNKHSIELIELNGVEQGLKMVVRHGIKKVRVQTDSSTVISFFRNKGQHPWQAEKMMRSIN 20
           ++ H I L+EL  + +GL + +   I+ + V++DS +V++    +  +  +A+  ++ I 
Sbjct: 209 ASGHDIFLVELWAIWRGLVLALNLHIQVLWVESDSLSVVNTINRQQPYSGKADACLKQIR 268

Query: 19  QL 14
            L
Sbjct: 269 LL 270


>emb|CAN72157.1| hypothetical protein VITISV_019020 [Vitis vinifera]
          Length = 318

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 33/101 (32%), Positives = 56/101 (55%)
 Frame = -1

Query: 325 WERAENGISNLNSDGSLQGMNGGWAAVARDGNGQVIVASKGRSNKHSIELIELNGVEQGL 146
           WE+ E G + LN+DGS+   N G+  + RD NG  I A   +++++ I L+EL  + +GL
Sbjct: 155 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 214

Query: 145 KMVVRHGIKKVRVQTDSSTVISFFRNKGQHPWQAEKMMRSI 23
            +    GIK + V++DS +V+     K  +  +A   +  I
Sbjct: 215 VLASGLGIKAIWVESDSMSVVKTINRKQPYSSRAGSCLNHI 255


>ref|XP_002285633.1| PREDICTED: uncharacterized protein LOC100264337 [Vitis vinifera]
          Length = 431

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 34/107 (31%), Positives = 58/107 (54%)
 Frame = -1

Query: 325 WERAENGISNLNSDGSLQGMNGGWAAVARDGNGQVIVASKGRSNKHSIELIELNGVEQGL 146
           WE+ E G + LN+DGS+   N G+  + RD NG  I A   +++++ I L+EL  + +GL
Sbjct: 268 WEKPEFGWTKLNTDGSIDRGNAGFGGLFRDHNGDPICAYASKAHQNDIFLVELWAIWRGL 327

Query: 145 KMVVRHGIKKVRVQTDSSTVISFFRNKGQHPWQAEKMMRSINQLREQ 5
            +    GIK + V++DS + +     K  +  +A   +  I  L E+
Sbjct: 328 VLASGLGIKAIWVESDSMSAVKTINRKQPYSSRAGSCLNHIWVLLEK 374


>ref|XP_002527364.1| conserved hypothetical protein [Ricinus communis]
           gi|223533283|gb|EEF35036.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 437

 Score = 58.5 bits (140), Expect = 6e-07
 Identities = 31/119 (26%), Positives = 57/119 (47%)
 Frame = -1

Query: 379 ETWNVKVDTAQCQHKTCKWERAENGISNLNSDGSLQGMNGGWAAVARDGNGQVIVASKGR 200
           E W+  +       + C W++ + G   LN+DGS+   + G+  + RD  G  I A   +
Sbjct: 256 EKWSGLISPVTGSIRWCIWKKPDVGWIKLNTDGSVDRQHAGFGGLLRDNEGNAICAFVSK 315

Query: 199 SNKHSIELIELNGVEQGLKMVVRHGIKKVRVQTDSSTVISFFRNKGQHPWQAEKMMRSI 23
           +    I L+EL  + +GL + +  GIK + V++DS + +        H  +A + +  I
Sbjct: 316 APLDDIFLVELWAIWRGLVLALGLGIKVIWVESDSMSAVKTINRVQSHSGKANRCLNHI 374


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