BLASTX nr result

ID: Coptis24_contig00017081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017081
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300225.1| predicted protein [Populus trichocarpa] gi|1...   273   3e-71
ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus comm...   271   7e-71
ref|NP_001235533.1| uncharacterized protein LOC100527911 [Glycin...   270   3e-70
gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia es...   269   4e-70
gb|ADR71283.1| 40S ribosomal protein S16A [Hevea brasiliensis]        269   4e-70

>ref|XP_002300225.1| predicted protein [Populus trichocarpa] gi|118481666|gb|ABK92774.1|
           unknown [Populus trichocarpa]
           gi|118483691|gb|ABK93739.1| unknown [Populus
           trichocarpa] gi|118487129|gb|ABK95393.1| unknown
           [Populus trichocarpa] gi|222847483|gb|EEE85030.1|
           predicted protein [Populus trichocarpa]
          Length = 146

 Score =  273 bits (697), Expect = 3e-71
 Identities = 138/148 (93%), Positives = 141/148 (95%)
 Frame = +1

Query: 22  MTTPAPTKVESVQCFGRKKTAVAVTHCKRGRGLIKINGSPIELVEPEILKFKAIEPMLLL 201
           M T APT  ESVQCFGRKKTAVAVTHCKRGRGLIKINGSPIELVEPEIL+FKA EP+LLL
Sbjct: 1   MATAAPT--ESVQCFGRKKTAVAVTHCKRGRGLIKINGSPIELVEPEILRFKAYEPILLL 58

Query: 202 GRHRFAGVDMRIRVRGGGHTSQIYAIRQSIAKALVAFYQKYVDEQQKKEIKDILVRYDRT 381
           GRHRFAGVDMRIRV+GGGHTSQIYAIRQSIAKALVAFYQKYVDEQ KKEIKDILVRYDRT
Sbjct: 59  GRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRT 118

Query: 382 LLVADPRRCEPKKFGGRGARARFQKSYR 465
           LLVADPRRCE KKFGGRGARARFQKSYR
Sbjct: 119 LLVADPRRCETKKFGGRGARARFQKSYR 146


>ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223542119|gb|EEF43663.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 151

 Score =  271 bits (694), Expect = 7e-71
 Identities = 133/143 (93%), Positives = 139/143 (97%)
 Frame = +1

Query: 37  PTKVESVQCFGRKKTAVAVTHCKRGRGLIKINGSPIELVEPEILKFKAIEPMLLLGRHRF 216
           P++ ESVQCFGRKKTAVAVTHCKRGRGLIKING PIELVEPEIL+FKA EP+LLLGRHRF
Sbjct: 9   PSQTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHRF 68

Query: 217 AGVDMRIRVRGGGHTSQIYAIRQSIAKALVAFYQKYVDEQQKKEIKDILVRYDRTLLVAD 396
           AGVDMRIRV+GGGHTSQIYAIRQSIAKALVA+YQKYVDEQ KKEIKDILVRYDRTLLVAD
Sbjct: 69  AGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVAD 128

Query: 397 PRRCEPKKFGGRGARARFQKSYR 465
           PRRCEPKKFGGRGARARFQKSYR
Sbjct: 129 PRRCEPKKFGGRGARARFQKSYR 151


>ref|NP_001235533.1| uncharacterized protein LOC100527911 [Glycine max]
           gi|255633528|gb|ACU17122.1| unknown [Glycine max]
          Length = 157

 Score =  270 bits (689), Expect = 3e-70
 Identities = 132/144 (91%), Positives = 138/144 (95%)
 Frame = +1

Query: 34  APTKVESVQCFGRKKTAVAVTHCKRGRGLIKINGSPIELVEPEILKFKAIEPMLLLGRHR 213
           AP  +E VQCFGRKKTAVAVT+CKRGRGLIKING PIELVEPEIL+FKA EP+LLLGRHR
Sbjct: 14  APAAIEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPILLLGRHR 73

Query: 214 FAGVDMRIRVRGGGHTSQIYAIRQSIAKALVAFYQKYVDEQQKKEIKDILVRYDRTLLVA 393
           FAGVDMRIRV+GGGHTSQIYAIRQSIAKALVA+YQKYVDEQ KKEIKDILVRYDRTLLVA
Sbjct: 74  FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVA 133

Query: 394 DPRRCEPKKFGGRGARARFQKSYR 465
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 134 DPRRCEPKKFGGRGARARFQKSYR 157


>gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia esula]
          Length = 144

 Score =  269 bits (688), Expect = 4e-70
 Identities = 133/144 (92%), Positives = 138/144 (95%)
 Frame = +1

Query: 34  APTKVESVQCFGRKKTAVAVTHCKRGRGLIKINGSPIELVEPEILKFKAIEPMLLLGRHR 213
           A T  ESVQCFGRKKTAVAVTHCKRGRGLIKING PIELVEPEIL+FKA EP+LLLGRHR
Sbjct: 1   AATPTESVQCFGRKKTAVAVTHCKRGRGLIKINGCPIELVEPEILRFKAYEPILLLGRHR 60

Query: 214 FAGVDMRIRVRGGGHTSQIYAIRQSIAKALVAFYQKYVDEQQKKEIKDILVRYDRTLLVA 393
           FAGVDMRIRV+GGGHTSQIYAIRQSIAKALVA+YQK+VDEQ KKEIKDILVRYDRTLLVA
Sbjct: 61  FAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRYDRTLLVA 120

Query: 394 DPRRCEPKKFGGRGARARFQKSYR 465
           DPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 DPRRCEPKKFGGRGARARFQKSYR 144


>gb|ADR71283.1| 40S ribosomal protein S16A [Hevea brasiliensis]
          Length = 147

 Score =  269 bits (688), Expect = 4e-70
 Identities = 135/148 (91%), Positives = 140/148 (94%)
 Frame = +1

Query: 22  MTTPAPTKVESVQCFGRKKTAVAVTHCKRGRGLIKINGSPIELVEPEILKFKAIEPMLLL 201
           M  PA   +ESVQCFGRKKTAVAVT+CKRGRGLIKING PIELVEPEIL+FKA EP+LLL
Sbjct: 1   MAAPA-APIESVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAYEPILLL 59

Query: 202 GRHRFAGVDMRIRVRGGGHTSQIYAIRQSIAKALVAFYQKYVDEQQKKEIKDILVRYDRT 381
           GRHRFAGVDMRIRV+GGGHTSQIYAIRQSIAKALVAFYQKYVDEQ KKEIKDILVRYDRT
Sbjct: 60  GRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRT 119

Query: 382 LLVADPRRCEPKKFGGRGARARFQKSYR 465
           LLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 120 LLVADPRRCEPKKFGGRGARARFQKSYR 147


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