BLASTX nr result

ID: Coptis24_contig00017075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017075
         (1655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136869.1| PREDICTED: protein TrpH-like [Cucumis sativu...   553   e-155
ref|XP_002299681.1| predicted protein [Populus trichocarpa] gi|2...   540   e-151
ref|XP_003531039.1| PREDICTED: protein trpH-like [Glycine max]        521   e-145
ref|XP_003524745.1| PREDICTED: protein trpH-like [Glycine max]        518   e-144
ref|XP_002885895.1| PHP domain-containing protein [Arabidopsis l...   509   e-142

>ref|XP_004136869.1| PREDICTED: protein TrpH-like [Cucumis sativus]
            gi|449478899|ref|XP_004155448.1| PREDICTED: protein
            TrpH-like [Cucumis sativus]
          Length = 443

 Score =  553 bits (1425), Expect = e-155
 Identities = 272/407 (66%), Positives = 331/407 (81%), Gaps = 1/407 (0%)
 Frame = +1

Query: 163  MTMEQSYATKYVSEWVFLXXXXXXXXXXXXXXXXXFGVQLKSSNKVSDKFVFELHSHSIC 342
            MT EQ  A KYV+EW +L                 FGVQ K+  K  +K VFELHSHS C
Sbjct: 31   MTSEQIAAFKYVTEWAYLDQSNSLASSAAASVVDDFGVQ-KTVGKGGEKVVFELHSHSKC 89

Query: 343  SDGFLSPTAVVERAHRNGVKVLSLTDHDTMSGIPEALEAARKFGIKIIPGVEISTIFTSR 522
            SDGFL+P+ +VERAH NGVKVL+LTDHDTMSGIPEA+EAAR+FGIKIIPGVEISTIF++ 
Sbjct: 90   SDGFLTPSKLVERAHGNGVKVLALTDHDTMSGIPEAVEAARRFGIKIIPGVEISTIFSNG 149

Query: 523  -ESGAEEPVHVLAYYGSCGPKGMDELETCLAYIREGRYQRAKNMISKLENLKMPLKWEHV 699
             +S +EEPVH+LAYY SCGP  +++LE  L  IREGR+ RAKNM+SKL  LK+PLKW+HV
Sbjct: 150  GDSESEEPVHILAYYSSCGPAKIEKLEKFLENIREGRFLRAKNMVSKLNELKLPLKWDHV 209

Query: 700  AKIAGIGVAPGRLHVARAMVEAGHVENLKQAFNRYLYDGGPAYSTGNELHAEEAVQMICR 879
            AKI G GVAPGRLHVARA+VEAG+VENLKQAF+RYL+DGGPAYSTG+E  A EA+Q+I  
Sbjct: 210  AKITGKGVAPGRLHVARALVEAGYVENLKQAFSRYLFDGGPAYSTGSEPCAAEAIQLIHD 269

Query: 880  TGGVAALAHPWALKNPLAVVRRLKDAGLHGIEVYRSDGKLAAFSDLADTYDLVKLGGSDY 1059
            TGG+A LAHPWALKNP+AV+RRLKDAGLHG+EVYRSDG+LAA+SDLAD Y L+KLGGSD+
Sbjct: 270  TGGMAVLAHPWALKNPVAVIRRLKDAGLHGLEVYRSDGRLAAYSDLADNYGLLKLGGSDF 329

Query: 1060 HGRGTHDESDLGSVNLPVMTLHAFLKVARPIWCNAFKDILHNFVEDPSDSSLEKLTKFGK 1239
            HGRG H ES++GSVNLPV+ +H FLK ARP+WC+A +DIL ++VE+PS+S+L K+T+FG+
Sbjct: 330  HGRGGHSESEVGSVNLPVLAMHDFLKAARPVWCSAIRDILESYVEEPSESNLAKITRFGR 389

Query: 1240 VRNLKAGINMNCCNDVIDMCLSSWLTNDERQEVEFEALRLKLSHTDI 1380
             R LK G +    ND+I+ CL+ WLTN+E+Q  EFEA+RLKLSH  I
Sbjct: 390  TRVLKGGSSPGSGNDLIERCLTLWLTNEEKQNDEFEAIRLKLSHISI 436


>ref|XP_002299681.1| predicted protein [Populus trichocarpa] gi|222846939|gb|EEE84486.1|
            predicted protein [Populus trichocarpa]
          Length = 408

 Score =  540 bits (1390), Expect = e-151
 Identities = 271/402 (67%), Positives = 314/402 (78%)
 Frame = +1

Query: 163  MTMEQSYATKYVSEWVFLXXXXXXXXXXXXXXXXXFGVQLKSSNKVSDKFVFELHSHSIC 342
            MT+EQ+ A+K VSEWV+L                 FGV      +  DK VFELH+HS  
Sbjct: 1    MTVEQTLASKSVSEWVYLDRKLVADDFD-------FGVHKTVMMRREDKVVFELHTHSKF 53

Query: 343  SDGFLSPTAVVERAHRNGVKVLSLTDHDTMSGIPEALEAARKFGIKIIPGVEISTIFTSR 522
            SDGFLSP+ +VERAH NGVKVL+LTDHDTMSGIPEA EAAR+FGIKIIPGVEIST+F+ R
Sbjct: 54   SDGFLSPSKLVERAHGNGVKVLALTDHDTMSGIPEATEAARRFGIKIIPGVEISTMFSPR 113

Query: 523  ESGAEEPVHVLAYYGSCGPKGMDELETCLAYIREGRYQRAKNMISKLENLKMPLKWEHVA 702
               AEEPVH+LAYY S GP   DELE  LA IR+GRY RAK+M+ KL  LK+PLKWEHV 
Sbjct: 114  NPEAEEPVHILAYYSSGGPTRSDELEKFLANIRDGRYLRAKDMVLKLNKLKLPLKWEHVT 173

Query: 703  KIAGIGVAPGRLHVARAMVEAGHVENLKQAFNRYLYDGGPAYSTGNELHAEEAVQMICRT 882
            +I G GVAPGRLHVARAMVEAG+VENLKQAF RYLYDGGPAYSTGNE   EEAVQ+IC T
Sbjct: 174  RITGKGVAPGRLHVARAMVEAGYVENLKQAFARYLYDGGPAYSTGNEPLVEEAVQLICET 233

Query: 883  GGVAALAHPWALKNPLAVVRRLKDAGLHGIEVYRSDGKLAAFSDLADTYDLVKLGGSDYH 1062
            GGVA LAHPWALKNP+A+++RLKDAGLHG+EVYRSDGKLA +SDLAD Y L+KLGGSDYH
Sbjct: 234  GGVAVLAHPWALKNPVAIIQRLKDAGLHGMEVYRSDGKLAVYSDLADAYGLLKLGGSDYH 293

Query: 1063 GRGTHDESDLGSVNLPVMTLHAFLKVARPIWCNAFKDILHNFVEDPSDSSLEKLTKFGKV 1242
            GRG + ES+LGSVNLP + LH FLKVARPIW +A KDI   + E+PSD +L ++TKFG  
Sbjct: 294  GRGGNSESELGSVNLPAIALHDFLKVARPIWYHAIKDIFERYAEEPSDLNLARITKFGGT 353

Query: 1243 RNLKAGINMNCCNDVIDMCLSSWLTNDERQEVEFEALRLKLS 1368
            + LK    M+C  D+ID CLS WLT +ERQ  EFEA+++KLS
Sbjct: 354  KILKGNSPMSCGKDLIDRCLSLWLTTEERQTAEFEAIKIKLS 395


>ref|XP_003531039.1| PREDICTED: protein trpH-like [Glycine max]
          Length = 458

 Score =  521 bits (1343), Expect = e-145
 Identities = 261/409 (63%), Positives = 319/409 (77%), Gaps = 3/409 (0%)
 Frame = +1

Query: 163  MTMEQSYATKYVSEWVFLXXXXXXXXXXXXXXXXX--FGVQLKSSNKVSDKFVFELHSHS 336
            MT EQ  A K VSEWVFL                   FGVQ K   +  +K +FELHSHS
Sbjct: 39   MTHEQVLAFKLVSEWVFLDHPSASSSSSSAASCVVDDFGVQ-KPLGRGGEKLLFELHSHS 97

Query: 337  ICSDGFLSPTAVVERAHRNGVKVLSLTDHDTMSGIPEALEAARKFGIKIIPGVEISTIFT 516
              SDGF SP+ VVERAH NGVKVL+LTDHDTMSGIPEA+E+ARK+GIKIIPGVEISTIF+
Sbjct: 98   KFSDGFFSPSKVVERAHINGVKVLALTDHDTMSGIPEAVESARKYGIKIIPGVEISTIFS 157

Query: 517  SR-ESGAEEPVHVLAYYGSCGPKGMDELETCLAYIREGRYQRAKNMISKLENLKMPLKWE 693
             R +S  EEPVH+LAYY S GP   +EL+  L+ IR+GR+ RA+N++ KL  LK+PLKWE
Sbjct: 158  PRGDSEVEEPVHILAYYSSIGPSRFEELDKFLSNIRDGRFLRAQNIVLKLNKLKLPLKWE 217

Query: 694  HVAKIAGIGVAPGRLHVARAMVEAGHVENLKQAFNRYLYDGGPAYSTGNELHAEEAVQMI 873
            HV +IAG GVAPGRLHVARAM+EAG+VENL+QAF RYL+DGGPAYSTG+E  AEEA++MI
Sbjct: 218  HVCRIAGKGVAPGRLHVARAMLEAGYVENLRQAFARYLFDGGPAYSTGSEPLAEEAIKMI 277

Query: 874  CRTGGVAALAHPWALKNPLAVVRRLKDAGLHGIEVYRSDGKLAAFSDLADTYDLVKLGGS 1053
              TGGVA LAHPWALKNP+ +VRRLK+AGLHG+EVY+SDG+LAA+SDLAD Y L+K+GGS
Sbjct: 278  SHTGGVAVLAHPWALKNPVPIVRRLKEAGLHGMEVYKSDGRLAAYSDLADAYGLLKIGGS 337

Query: 1054 DYHGRGTHDESDLGSVNLPVMTLHAFLKVARPIWCNAFKDILHNFVEDPSDSSLEKLTKF 1233
            DYHGRG H+ES+LGSVNLPV+ LH FLKVARPIWCNA ++IL  + E+PSDS+L  +T+F
Sbjct: 338  DYHGRGGHNESELGSVNLPVIVLHDFLKVARPIWCNAIREILECYAEEPSDSNLATITRF 397

Query: 1234 GKVRNLKAGINMNCCNDVIDMCLSSWLTNDERQEVEFEALRLKLSHTDI 1380
            G+  + K G   +C  D+ID CL  WL++ E +  EFEA++LKLS+  +
Sbjct: 398  GRTWSFKGGSPFSCGQDLIDHCLPLWLSSQEMENAEFEAIKLKLSNVSV 446


>ref|XP_003524745.1| PREDICTED: protein trpH-like [Glycine max]
          Length = 455

 Score =  518 bits (1333), Expect = e-144
 Identities = 256/404 (63%), Positives = 316/404 (78%), Gaps = 1/404 (0%)
 Frame = +1

Query: 163  MTMEQSYATKYVSEWVFLXXXXXXXXXXXXXXXXXFGVQLKSSNKVSDKFVFELHSHSIC 342
            MT EQ  A K VSEWVFL                 FGVQ K   +  +K +FELHSHS  
Sbjct: 38   MTHEQVLAFKLVSEWVFLDHPSASSSSSSSCVVDDFGVQ-KPLGRGGEKLLFELHSHSKF 96

Query: 343  SDGFLSPTAVVERAHRNGVKVLSLTDHDTMSGIPEALEAARKFGIKIIPGVEISTIFTSR 522
            SDGF SP+ VVERAH NGVKVL+LTDHDTMSGIPEA+E+ARK+GIKIIPGVEIST+F+ R
Sbjct: 97   SDGFFSPSKVVERAHLNGVKVLALTDHDTMSGIPEAVESARKYGIKIIPGVEISTMFSPR 156

Query: 523  -ESGAEEPVHVLAYYGSCGPKGMDELETCLAYIREGRYQRAKNMISKLENLKMPLKWEHV 699
             +S  +EPVH+LAYY S GP   +EL+  L+ IR+GR+ RA+N++ KL  LK+PLKWEHV
Sbjct: 157  GDSEVKEPVHILAYYSSIGPSRFEELDKFLSNIRDGRFLRAQNIVLKLNKLKLPLKWEHV 216

Query: 700  AKIAGIGVAPGRLHVARAMVEAGHVENLKQAFNRYLYDGGPAYSTGNELHAEEAVQMICR 879
             +IAG GVAPGRLHVARAMVEAG+VENL+QAF RYL+DGGPAY+TG+E  AEEA++MIC 
Sbjct: 217  CRIAGKGVAPGRLHVARAMVEAGYVENLRQAFARYLFDGGPAYATGSEPLAEEAIKMICH 276

Query: 880  TGGVAALAHPWALKNPLAVVRRLKDAGLHGIEVYRSDGKLAAFSDLADTYDLVKLGGSDY 1059
            TGGVA LAHPWALKNP+ ++R LK+AGLHG+EVY+SDG+LAA+SDLAD Y L+K+GGSDY
Sbjct: 277  TGGVAVLAHPWALKNPIPIIRGLKEAGLHGMEVYKSDGRLAAYSDLADAYGLLKIGGSDY 336

Query: 1060 HGRGTHDESDLGSVNLPVMTLHAFLKVARPIWCNAFKDILHNFVEDPSDSSLEKLTKFGK 1239
            HGRG H+ES+LGSVNLPV+ LH FL VARPIWCNA ++IL  + E+PSDS+L  +T+FG+
Sbjct: 337  HGRGGHNESELGSVNLPVLVLHDFLMVARPIWCNAIREILECYAEEPSDSNLATITRFGR 396

Query: 1240 VRNLKAGINMNCCNDVIDMCLSSWLTNDERQEVEFEALRLKLSH 1371
             R  K G  ++   D+ID CL  WL++ E +   FEA++LKLS+
Sbjct: 397  TRIFKGGSPLSFGQDLIDHCLPLWLSSQEMENAGFEAIKLKLSN 440


>ref|XP_002885895.1| PHP domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297331735|gb|EFH62154.1| PHP domain-containing protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 434

 Score =  509 bits (1312), Expect = e-142
 Identities = 253/407 (62%), Positives = 311/407 (76%), Gaps = 1/407 (0%)
 Frame = +1

Query: 163  MTMEQSYATKYVSEWVFLXXXXXXXXXXXXXXXXXFGVQLKSSN-KVSDKFVFELHSHSI 339
            MT EQS A K V++W+F+                 F V + SS+ +  +K VFELHSHS 
Sbjct: 22   MTTEQSEAFKSVTDWLFVGSSPSLSSSSDD-----FAVTINSSSLRCGEKLVFELHSHSN 76

Query: 340  CSDGFLSPTAVVERAHRNGVKVLSLTDHDTMSGIPEALEAARKFGIKIIPGVEISTIFTS 519
             SDGFLSP+ +VERAH NGVKVLSLTDHDTM+GIPEA+EA R+FGIKIIPG+EIST+F S
Sbjct: 77   RSDGFLSPSKLVERAHNNGVKVLSLTDHDTMAGIPEAVEAGRRFGIKIIPGIEISTLFGS 136

Query: 520  RESGAEEPVHVLAYYGSCGPKGMDELETCLAYIREGRYQRAKNMISKLENLKMPLKWEHV 699
            R+SG+EEPVH+LAYYG+ GP   DELE  L  IR+GR+ R + M+ KL  LK+PLKWEHV
Sbjct: 137  RDSGSEEPVHILAYYGTSGPAMYDELEDFLVKIRDGRFVRGREMVLKLNKLKVPLKWEHV 196

Query: 700  AKIAGIGVAPGRLHVARAMVEAGHVENLKQAFNRYLYDGGPAYSTGNELHAEEAVQMICR 879
             +IAG  VAPGR+HVARA++EAG+VENLKQAF +YL+DGGPAYSTG+E  AEEAV++IC+
Sbjct: 197  TRIAGKDVAPGRMHVARALLEAGYVENLKQAFTKYLHDGGPAYSTGSEPMAEEAVKLICK 256

Query: 880  TGGVAALAHPWALKNPLAVVRRLKDAGLHGIEVYRSDGKLAAFSDLADTYDLVKLGGSDY 1059
            TGGVA LAHPWALKN + V+RRLKDAGLHG+EVYRSDGKL  FS+LADTY L+KLGGSDY
Sbjct: 257  TGGVAVLAHPWALKNHVGVIRRLKDAGLHGVEVYRSDGKLEVFSELADTYSLLKLGGSDY 316

Query: 1060 HGRGTHDESDLGSVNLPVMTLHAFLKVARPIWCNAFKDILHNFVEDPSDSSLEKLTKFGK 1239
            HG+G  +ES+LGSVNLPV  L  FL V RP+WC A K  +  F+  PSDS+L  + +F +
Sbjct: 317  HGKGGRNESELGSVNLPVTALQDFLNVGRPLWCEAIKATMKAFLAQPSDSNLSNILRFDR 376

Query: 1240 VRNLKAGINMNCCNDVIDMCLSSWLTNDERQEVEFEALRLKLSHTDI 1380
             R LK     +C  +++D CL+ WLT+DER+  +FEALRLKLS   I
Sbjct: 377  ARILKGNSAWSCGKELMDRCLAIWLTSDERKSNDFEALRLKLSFVPI 423


Top