BLASTX nr result

ID: Coptis24_contig00017072 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017072
         (1674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33675.3| unnamed protein product [Vitis vinifera]              425   e-116
ref|XP_002279924.1| PREDICTED: uncharacterized protein LOC100256...   425   e-116
ref|XP_002516742.1| conserved hypothetical protein [Ricinus comm...   410   e-112
ref|XP_002329276.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_003541279.1| PREDICTED: uncharacterized protein LOC100808...   369   2e-99

>emb|CBI33675.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  425 bits (1092), Expect = e-116
 Identities = 236/510 (46%), Positives = 318/510 (62%), Gaps = 7/510 (1%)
 Frame = +2

Query: 77   MALVPTYSSLYTKDQVPPLSKSMKLKGRSIADDCSARQKKSKYFCSFYGNRRNDVLHHTT 256
            MA+VP    +  KDQ  P+ K ++   +    DC   Q+ S  F S   +        T 
Sbjct: 38   MAVVPVCHKMSYKDQAYPIQKIIRQSEKGFGWDCIGIQEGSGCFSSMCSDS-------TG 90

Query: 257  FQNKGKTRQGADVFSTVCQRTSMAFQV-TGLHVLCTLRDEENEMSSSLKNKLHTDKHPMT 433
               K K R        V  R+ + F+  T LH L  +   E+ + S  +N    +     
Sbjct: 91   ISIKLKAR--------VHNRSLLQFRHRTELHGLHRMSYTESCLRSISENASQRENLGTV 142

Query: 434  MYASESSSIGRQLEALDSYFGKLRNNSHKQQPSFISSGDSETMPISENELQPSSNIPSKT 613
              ASESS+  +QL  LD YFGKL N   +   S + S D +T      EL   S      
Sbjct: 143  WSASESSTNEKQLRLLDLYFGKLHN---EDDGSSLHSSDKKT------ELMDQSG----- 188

Query: 614  TDIEAEKGLASLEIYHSKLKAIKSHKTILTTKEMNLMRSEQH------VNRDYGSSEEKM 775
               + ++GL SLE +  K+    + +  L +   + +  ++H      +  D    +E  
Sbjct: 189  -QFKPKEGLRSLEDHLGKINKDATSENYLPSSPCDKIDEDKHDIEPFSITEDVNPVDEGK 247

Query: 776  VENYVQFEKMDDEPNPKFSQGVQPQEETSDLYLICVLASMNIGVFLFEKASPVKTSDVEL 955
            +++Y +    D +  PK S+  QP +ETSDLYLI +L S+NI V LFE ASP++ SD+EL
Sbjct: 248  LKSYAELRNKDGDSGPKNSREQQPYDETSDLYLISILVSINIAVVLFELASPIRNSDLEL 307

Query: 956  LTLPSLYGAKINQLILDGEWWRLVTPMFLHSGIFHVALGFWVLLSFAPQVCKGYGSFTFF 1135
             +LP +YGAKIN LIL GEWWRLVTPMFLHSGIFHVALG WVLL+F PQVC+GYGSFTFF
Sbjct: 308  SSLPLMYGAKINDLILVGEWWRLVTPMFLHSGIFHVALGCWVLLTFGPQVCRGYGSFTFF 367

Query: 1136 LIYLLGGISGNMTSYIHTPEPTVGGTGPIFAIIGAWLIYQFQNKEAIEKEVSESMFRKAV 1315
            LIY+LGGISGN+TS++HTP+ TVGGTGP+FAIIGAW+I+Q QNK+ I K+VSESM+ KA+
Sbjct: 368  LIYILGGISGNLTSFLHTPDLTVGGTGPVFAIIGAWVIHQIQNKDVIAKDVSESMYHKAI 427

Query: 1316 IATALSFVLSNFGPIDNWSHLGAACVGIAYGFLTCPTLQLDNLPSKTDKKNGFALVRHYA 1495
            IATALS +LS+F PID+W+H GAA  GIAYG+ TCPT+QL++  SKT +K G  LVR YA
Sbjct: 428  IATALSSILSHFCPIDDWTHFGAAFTGIAYGYFTCPTIQLNHTSSKTGQKEGITLVRRYA 487

Query: 1496 DPCKSIVTFAVFIVILSSLLLFVEPQVDTL 1585
            DPCKS++ F +F+++L  +L F+EP ++TL
Sbjct: 488  DPCKSLIIFTLFVLVLICVLFFIEPPLNTL 517


>ref|XP_002279924.1| PREDICTED: uncharacterized protein LOC100256693 [Vitis vinifera]
          Length = 486

 Score =  425 bits (1092), Expect = e-116
 Identities = 236/510 (46%), Positives = 318/510 (62%), Gaps = 7/510 (1%)
 Frame = +2

Query: 77   MALVPTYSSLYTKDQVPPLSKSMKLKGRSIADDCSARQKKSKYFCSFYGNRRNDVLHHTT 256
            MA+VP    +  KDQ  P+ K ++   +    DC   Q+ S  F S   +        T 
Sbjct: 1    MAVVPVCHKMSYKDQAYPIQKIIRQSEKGFGWDCIGIQEGSGCFSSMCSDS-------TG 53

Query: 257  FQNKGKTRQGADVFSTVCQRTSMAFQV-TGLHVLCTLRDEENEMSSSLKNKLHTDKHPMT 433
               K K R        V  R+ + F+  T LH L  +   E+ + S  +N    +     
Sbjct: 54   ISIKLKAR--------VHNRSLLQFRHRTELHGLHRMSYTESCLRSISENASQRENLGTV 105

Query: 434  MYASESSSIGRQLEALDSYFGKLRNNSHKQQPSFISSGDSETMPISENELQPSSNIPSKT 613
              ASESS+  +QL  LD YFGKL N   +   S + S D +T      EL   S      
Sbjct: 106  WSASESSTNEKQLRLLDLYFGKLHN---EDDGSSLHSSDKKT------ELMDQSG----- 151

Query: 614  TDIEAEKGLASLEIYHSKLKAIKSHKTILTTKEMNLMRSEQH------VNRDYGSSEEKM 775
               + ++GL SLE +  K+    + +  L +   + +  ++H      +  D    +E  
Sbjct: 152  -QFKPKEGLRSLEDHLGKINKDATSENYLPSSPCDKIDEDKHDIEPFSITEDVNPVDEGK 210

Query: 776  VENYVQFEKMDDEPNPKFSQGVQPQEETSDLYLICVLASMNIGVFLFEKASPVKTSDVEL 955
            +++Y +    D +  PK S+  QP +ETSDLYLI +L S+NI V LFE ASP++ SD+EL
Sbjct: 211  LKSYAELRNKDGDSGPKNSREQQPYDETSDLYLISILVSINIAVVLFELASPIRNSDLEL 270

Query: 956  LTLPSLYGAKINQLILDGEWWRLVTPMFLHSGIFHVALGFWVLLSFAPQVCKGYGSFTFF 1135
             +LP +YGAKIN LIL GEWWRLVTPMFLHSGIFHVALG WVLL+F PQVC+GYGSFTFF
Sbjct: 271  SSLPLMYGAKINDLILVGEWWRLVTPMFLHSGIFHVALGCWVLLTFGPQVCRGYGSFTFF 330

Query: 1136 LIYLLGGISGNMTSYIHTPEPTVGGTGPIFAIIGAWLIYQFQNKEAIEKEVSESMFRKAV 1315
            LIY+LGGISGN+TS++HTP+ TVGGTGP+FAIIGAW+I+Q QNK+ I K+VSESM+ KA+
Sbjct: 331  LIYILGGISGNLTSFLHTPDLTVGGTGPVFAIIGAWVIHQIQNKDVIAKDVSESMYHKAI 390

Query: 1316 IATALSFVLSNFGPIDNWSHLGAACVGIAYGFLTCPTLQLDNLPSKTDKKNGFALVRHYA 1495
            IATALS +LS+F PID+W+H GAA  GIAYG+ TCPT+QL++  SKT +K G  LVR YA
Sbjct: 391  IATALSSILSHFCPIDDWTHFGAAFTGIAYGYFTCPTIQLNHTSSKTGQKEGITLVRRYA 450

Query: 1496 DPCKSIVTFAVFIVILSSLLLFVEPQVDTL 1585
            DPCKS++ F +F+++L  +L F+EP ++TL
Sbjct: 451  DPCKSLIIFTLFVLVLICVLFFIEPPLNTL 480


>ref|XP_002516742.1| conserved hypothetical protein [Ricinus communis]
            gi|223544115|gb|EEF45640.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 429

 Score =  410 bits (1054), Expect = e-112
 Identities = 209/387 (54%), Positives = 275/387 (71%)
 Frame = +2

Query: 428  MTMYASESSSIGRQLEALDSYFGKLRNNSHKQQPSFISSGDSETMPISENELQPSSNIPS 607
            M  +AS++S   +QL  LDSYFGKL+ +++  QPS  SS ++  +     E+ P+  + S
Sbjct: 41   MGSHASKTSINEKQLRLLDSYFGKLQGDAN--QPSTDSSDETTKLGNKSKEINPTEELQS 98

Query: 608  KTTDIEAEKGLASLEIYHSKLKAIKSHKTILTTKEMNLMRSEQHVNRDYGSSEEKMVENY 787
              + ++     ++LE Y      + S    LTT+   L+     V  D    EE+  +++
Sbjct: 99   LNSYLDKLSKDSNLENY------VSSTSDDLTTESEKLVS----VYEDSKRGEEEKPKSF 148

Query: 788  VQFEKMDDEPNPKFSQGVQPQEETSDLYLICVLASMNIGVFLFEKASPVKTSDVELLTLP 967
            V+  + D     + SQ +Q  +ETSDLYL  +L S+NI VFLFE ASPV+ S+ EL TLP
Sbjct: 149  VKLREKDANRGLRRSQALQQNDETSDLYLTSILVSINIAVFLFELASPVRNSEFELFTLP 208

Query: 968  SLYGAKINQLILDGEWWRLVTPMFLHSGIFHVALGFWVLLSFAPQVCKGYGSFTFFLIYL 1147
             LYGAKIN LIL GEWWRL+TPMFLHSG+FH+ALG W LL+F PQV +GYGSFTF LI++
Sbjct: 209  LLYGAKINDLILVGEWWRLLTPMFLHSGVFHMALGCWSLLTFGPQVSRGYGSFTFVLIFI 268

Query: 1148 LGGISGNMTSYIHTPEPTVGGTGPIFAIIGAWLIYQFQNKEAIEKEVSESMFRKAVIATA 1327
            LGGISGN+TS++HTPEPTVGGTGPIFAIIGAWL++Q QNK+ I K++SESMF+KA+I T 
Sbjct: 269  LGGISGNLTSFLHTPEPTVGGTGPIFAIIGAWLVFQMQNKDVIAKDISESMFQKAIIITG 328

Query: 1328 LSFVLSNFGPIDNWSHLGAACVGIAYGFLTCPTLQLDNLPSKTDKKNGFALVRHYADPCK 1507
            LSF+LS+FGPID+W+HLGA   GI YG+ TCPTLQLDN  S++ +  G A VR YA+ CK
Sbjct: 329  LSFILSHFGPIDDWTHLGATLTGIVYGYFTCPTLQLDNASSRSGQDEGVAFVRGYANSCK 388

Query: 1508 SIVTFAVFIVILSSLLLFVEPQVDTLE 1588
            S++ FAV IV+L SLL F+EP +DTLE
Sbjct: 389  SLILFAVLIVLLISLLFFIEPPLDTLE 415


>ref|XP_002329276.1| predicted protein [Populus trichocarpa] gi|222870730|gb|EEF07861.1|
            predicted protein [Populus trichocarpa]
          Length = 492

 Score =  377 bits (969), Expect = e-102
 Identities = 224/515 (43%), Positives = 306/515 (59%), Gaps = 12/515 (2%)
 Frame = +2

Query: 77   MALVPTYSSLYTKDQVPPLSKSMKLKGRSIADDCSARQKKSKYFCSFYGNRRNDVLHHTT 256
            MA+VP    +  KD    +    +   R +   CSA  +   Y       +RN  + +TT
Sbjct: 1    MAVVPICYKIPCKDHTLSIRNLARQHERGLLCACSAFAQGGSYLSISSDVQRNWPVIYTT 60

Query: 257  FQN--KGKTRQGADVFS-TVCQRTSMAFQVTGLHVLCTLRDEENEMSSSLKNKLH-TDKH 424
                 K KTR   +    T+  +  + FQ              + M     +K+H T + 
Sbjct: 61   ADVLVKVKTRGRTNASKGTILNQGLLKFQ--------------SVMDVPHLHKIHRTSRE 106

Query: 425  PMTMY--ASESSSIGRQLEALDSYFGKLRNNSHKQQPSFISSGDSETMPISENELQPSSN 598
             +++   AS+S +  +QL  LDSYFGKL++N    +PS  S   +E     +  +Q    
Sbjct: 107  NLSVACCASKSGTNEKQLRLLDSYFGKLQDNV--SEPS--SDSCNERTDFLDTRVQ---- 158

Query: 599  IPSKTTDIEAEKGLASLEIYHSKL-KAIKSHKTILTT-----KEMNLMRSEQHVNRDYGS 760
                   I  ++ L  L  Y  K+ K       + +T      E N +     V+++   
Sbjct: 159  -------INVKEELEYLNAYLDKVDKDANLENNVSSTFNDEATEENPIVKPISVSKESRR 211

Query: 761  SEEKMVENYVQFEKMDDEPNPKFSQGVQPQEETSDLYLICVLASMNIGVFLFEKASPVKT 940
              E+ + ++        E   + S+ ++   ETS  YLI  LAS+NI VFLFE ASPV+ 
Sbjct: 212  DNEERLRSFRNLRNQYVESGSRRSEALEQNYETSYFYLIGTLASINIAVFLFEIASPVRN 271

Query: 941  SDVELLTLPSLYGAKINQLILDGEWWRLVTPMFLHSGIFHVALGFWVLLSFAPQVCKGYG 1120
            S+  L +LP LYGAKIN+LIL GEWWRLVTPMFLHSG FHV LG W LL+F P+VC+GYG
Sbjct: 272  SEFALFSLPLLYGAKINELILVGEWWRLVTPMFLHSGAFHVVLGSWSLLTFGPEVCRGYG 331

Query: 1121 SFTFFLIYLLGGISGNMTSYIHTPEPTVGGTGPIFAIIGAWLIYQFQNKEAIEKEVSESM 1300
            SFTFFLIY+LGGISGN+TS++HTPEPTVGGTGP+FAIIGAWLIYQ QNK+ I K+  + M
Sbjct: 332  SFTFFLIYVLGGISGNLTSFLHTPEPTVGGTGPVFAIIGAWLIYQNQNKDVISKDDFDRM 391

Query: 1301 FRKAVIATALSFVLSNFGPIDNWSHLGAACVGIAYGFLTCPTLQLDNLPSKTDKKNGFAL 1480
            F+KAVI TA+SF+LS+FGPID+W+HLGA   GI YGF TC TLQLD+  S++ +  G AL
Sbjct: 392  FQKAVITTAVSFILSHFGPIDDWTHLGAVLTGIVYGFFTCATLQLDDASSRSGQDEGIAL 451

Query: 1481 VRHYADPCKSIVTFAVFIVILSSLLLFVEPQVDTL 1585
            V+ +ADPCKS++ F +FI+ LSS+L FVEP ++T+
Sbjct: 452  VKRHADPCKSLIIFTIFILFLSSMLFFVEPPLETV 486


>ref|XP_003541279.1| PREDICTED: uncharacterized protein LOC100808799 [Glycine max]
          Length = 503

 Score =  369 bits (946), Expect = 2e-99
 Identities = 223/516 (43%), Positives = 302/516 (58%), Gaps = 13/516 (2%)
 Frame = +2

Query: 77   MALVPTYSSLYTKDQVPPLSKSMKLKGRSIADDCSARQKKSKYF-------CSFYGNRRN 235
            MA  P +     KDQ  P    M+   +    +C    +            C  + N+ N
Sbjct: 1    MAAFPMFYKTPYKDQNLPTQNIMRQNEKRFMLECDNLHRSISSIPGQICRSCQPW-NKVN 59

Query: 236  DVLHHTTFQNKGKTRQGADVFSTVCQRTSMAFQVTGLHVLCTLRDEENEMSSSLKNKLHT 415
            ++L  +  + K  TR      S +  R S+   VT L   C   D    +     +K  T
Sbjct: 60   NILTKSNIKEKNVTR------SILHDRCSLHKNVTKL---CG-SDSHLSLIQGCYSK--T 107

Query: 416  DKHPMTMYASESSSIGRQLEALDSYFGKLRNNSHKQQPSFISSGDSETMPISENELQPSS 595
            +       ++ SSS  +QL +LDSYFGKL++N+       +S+ DS    I  + +   +
Sbjct: 108  ENLSRVWCSASSSSTEKQLRSLDSYFGKLQDNAK------LSTFDSSHKVIQVHHIDDHA 161

Query: 596  NIPSKTTDIEAEKGLASLEIYHSKLKAIKSHKTILTTKEMNLMRSEQHV------NRDYG 757
               SKT       GL SL+ Y  KL    + +  + +   N  RSE+++       +D  
Sbjct: 162  R--SKT-------GLESLDEYLGKLNRGANQEPHVPSYVEN--RSEENLAPKRSLTKDIE 210

Query: 758  SSEEKMVENYVQFEKMDDEPNPKFSQGVQPQEETSDLYLICVLASMNIGVFLFEKASPVK 937
             S  +    YV   ++     P+ +   Q   ETS LYLI +LAS+NI VFLFE ASP++
Sbjct: 211  RSNFRKRNAYVDIGRLKGVHGPRSAIDSQQHVETSSLYLIGILASVNIAVFLFEIASPIR 270

Query: 938  TSDVELLTLPSLYGAKINQLILDGEWWRLVTPMFLHSGIFHVALGFWVLLSFAPQVCKGY 1117
             SD+EL ++P LYGAKIN LI+ GEWWRLVTPMFLH+GIFH+A+  W LL+F PQVCKGY
Sbjct: 271  NSDLELFSIPLLYGAKINHLIMVGEWWRLVTPMFLHAGIFHMAVSCWALLTFGPQVCKGY 330

Query: 1118 GSFTFFLIYLLGGISGNMTSYIHTPEPTVGGTGPIFAIIGAWLIYQFQNKEAIEKEVSES 1297
            GSFTFFLIY+LGG++ N  S++HTP+PTVGGTGP+FAIIGAWL+YQ QNK+ I  + SE+
Sbjct: 331  GSFTFFLIYILGGVACNFISFLHTPDPTVGGTGPVFAIIGAWLMYQIQNKDVIASDASEN 390

Query: 1298 MFRKAVIATALSFVLSNFGPIDNWSHLGAACVGIAYGFLTCPTLQLDNLPSKTDKKNGFA 1477
            +F KAVI TAL F+LS+FGPID WSH GAA  G+AYGFLT P LQL++  S T ++ G  
Sbjct: 391  LFHKAVIMTALIFILSHFGPIDEWSHFGAAFSGMAYGFLTSPILQLNDSSSGTGQE-GLK 449

Query: 1478 LVRHYADPCKSIVTFAVFIVILSSLLLFVEPQVDTL 1585
            LVR Y D CKS+  F +FI++LSS L F+EP  + L
Sbjct: 450  LVRKYGDSCKSVFIFTIFIIVLSSFLFFMEPPPNAL 485


Top