BLASTX nr result

ID: Coptis24_contig00017064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017064
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284457.1| PREDICTED: DUF246 domain-containing protein ...   246   5e-63
ref|XP_003556095.1| PREDICTED: DUF246 domain-containing protein ...   244   3e-62
ref|XP_002526030.1| conserved hypothetical protein [Ricinus comm...   238   1e-60
ref|XP_003529417.1| PREDICTED: DUF246 domain-containing protein ...   238   2e-60
ref|XP_002315879.1| predicted protein [Populus trichocarpa] gi|2...   233   3e-59

>ref|XP_002284457.1| PREDICTED: DUF246 domain-containing protein At1g04910 [Vitis
           vinifera] gi|297737694|emb|CBI26895.3| unnamed protein
           product [Vitis vinifera]
          Length = 561

 Score =  246 bits (628), Expect = 5e-63
 Identities = 113/130 (86%), Positives = 126/130 (96%), Gaps = 1/130 (0%)
 Frame = -2

Query: 891 ETIVSAEELAPYKNYSSRMAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRFLYGGHSKTI 712
           E + SAEELAP+KNYSSRMAA+DYTVCLHSEVFVTTQGGNFPHFLMGHRR+LYGGHSKT+
Sbjct: 432 EMLASAEELAPFKNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLMGHRRYLYGGHSKTV 491

Query: 711 RPDKRKLALLFDNPNIGWKTFKRQMLSMRSHSDAKGIELKRPNDSIYSFPCPDCMCR-NK 535
           RPDKRKLALLFDNPNIGWK+FKRQML+MR+HSDAKG ELKRPNDSIY+FPCPDCMCR NK
Sbjct: 492 RPDKRKLALLFDNPNIGWKSFKRQMLNMRAHSDAKGFELKRPNDSIYTFPCPDCMCRMNK 551

Query: 534 TEDTKSSSAS 505
           +ED++SSSA+
Sbjct: 552 SEDSRSSSAT 561


>ref|XP_003556095.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 564

 Score =  244 bits (622), Expect = 3e-62
 Identities = 111/130 (85%), Positives = 126/130 (96%), Gaps = 1/130 (0%)
 Frame = -2

Query: 891 ETIVSAEELAPYKNYSSRMAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRFLYGGHSKTI 712
           ET+ S EELAP+KNYSSRMAA+DYTVCLHSEVFVTTQGGNFPHFL+GHRR+LYGGHSKTI
Sbjct: 435 ETLASEEELAPFKNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLLGHRRYLYGGHSKTI 494

Query: 711 RPDKRKLALLFDNPNIGWKTFKRQMLSMRSHSDAKGIELKRPNDSIYSFPCPDCMCR-NK 535
           +PDKRKLALLFDNPNIGWK+ KRQ+LSMRSHSD+KG+ELKRPNDSIYSFPCPDCMCR N+
Sbjct: 495 KPDKRKLALLFDNPNIGWKSLKRQLLSMRSHSDSKGVELKRPNDSIYSFPCPDCMCRANR 554

Query: 534 TEDTKSSSAS 505
           T+D++SSSA+
Sbjct: 555 TDDSRSSSAT 564


>ref|XP_002526030.1| conserved hypothetical protein [Ricinus communis]
           gi|223534677|gb|EEF36370.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 570

 Score =  238 bits (607), Expect = 1e-60
 Identities = 110/128 (85%), Positives = 119/128 (92%), Gaps = 1/128 (0%)
 Frame = -2

Query: 891 ETIVSAEELAPYKNYSSRMAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRFLYGGHSKTI 712
           E + S +ELAPYKNYSSRMAA+DYTVCLHSEVFVTTQGGNFPHFLMGHRRFLYGGHSKTI
Sbjct: 443 EMLASEDELAPYKNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLMGHRRFLYGGHSKTI 502

Query: 711 RPDKRKLALLFDNPNIGWKTFKRQMLSMRSHSDAKGIELKRPNDSIYSFPCPDCMCR-NK 535
           RPDKRKLALLFDNPN+GWK+FKR ML+MRSHSD+KG ELKRPNDSIYSFPCPDCMCR NK
Sbjct: 503 RPDKRKLALLFDNPNLGWKSFKRHMLNMRSHSDSKGFELKRPNDSIYSFPCPDCMCRMNK 562

Query: 534 TEDTKSSS 511
           TE   S++
Sbjct: 563 TESRSSAT 570


>ref|XP_003529417.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Glycine
           max]
          Length = 564

 Score =  238 bits (606), Expect = 2e-60
 Identities = 109/130 (83%), Positives = 123/130 (94%), Gaps = 1/130 (0%)
 Frame = -2

Query: 891 ETIVSAEELAPYKNYSSRMAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRFLYGGHSKTI 712
           ET+ S EELAP+KNYSSRMAA+DYTVCL SEVFVTTQGGNFPHFL+GHRRFLYGGH+KTI
Sbjct: 435 ETLASEEELAPFKNYSSRMAAIDYTVCLQSEVFVTTQGGNFPHFLLGHRRFLYGGHAKTI 494

Query: 711 RPDKRKLALLFDNPNIGWKTFKRQMLSMRSHSDAKGIELKRPNDSIYSFPCPDCMCR-NK 535
           +PDKRKLALLFDNPNIGWK+ KRQ+LSMRSHSD+KG+ELKRPNDSIYSFPCPDCMCR N+
Sbjct: 495 KPDKRKLALLFDNPNIGWKSLKRQLLSMRSHSDSKGVELKRPNDSIYSFPCPDCMCRSNR 554

Query: 534 TEDTKSSSAS 505
           T+D +SS A+
Sbjct: 555 TDDLRSSLAT 564


>ref|XP_002315879.1| predicted protein [Populus trichocarpa] gi|222864919|gb|EEF02050.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score =  233 bits (595), Expect = 3e-59
 Identities = 106/124 (85%), Positives = 118/124 (95%), Gaps = 1/124 (0%)
 Frame = -2

Query: 873 EELAPYKNYSSRMAALDYTVCLHSEVFVTTQGGNFPHFLMGHRRFLYGGHSKTIRPDKRK 694
           EEL P+KNYSSRMAA+DYTVCLHSEVFVTTQGGNFPHFLMGHRRFLYGGHSKTIRPDKRK
Sbjct: 446 EELDPFKNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLMGHRRFLYGGHSKTIRPDKRK 505

Query: 693 LALLFDNPNIGWKTFKRQMLSMRSHSDAKGIELKRPNDSIYSFPCPDCMCR-NKTEDTKS 517
           LALLFDNP IGWK+FKR M++MRSHSD+KG ELKRPNDS+YS+PCPDCMCR N+TED++S
Sbjct: 506 LALLFDNPKIGWKSFKRHMMNMRSHSDSKGFELKRPNDSVYSYPCPDCMCRVNRTEDSRS 565

Query: 516 SSAS 505
           SS +
Sbjct: 566 SSVT 569


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