BLASTX nr result

ID: Coptis24_contig00017053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017053
         (1189 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631292.1| PREDICTED: uncharacterized protein LOC100854...   203   6e-50
emb|CAN76449.1| hypothetical protein VITISV_029869 [Vitis vinifera]   180   7e-43
ref|XP_002520214.1| conserved hypothetical protein [Ricinus comm...   170   7e-40
ref|XP_002311864.1| predicted protein [Populus trichocarpa] gi|2...   160   8e-37
ref|NP_001237195.1| uncharacterized protein LOC100527006 [Glycin...   159   1e-36

>ref|XP_003631292.1| PREDICTED: uncharacterized protein LOC100854597 [Vitis vinifera]
           gi|296086493|emb|CBI32082.3| unnamed protein product
           [Vitis vinifera]
          Length = 247

 Score =  203 bits (517), Expect = 6e-50
 Identities = 117/233 (50%), Positives = 149/233 (63%), Gaps = 8/233 (3%)
 Frame = +3

Query: 84  MEKGGCDRTNMVSHSWDGDNILNVKTHVAEKKLRLFGFELNPHSK------ETEEGDESV 245
           MEK G    + +S    GD+     T V EKKLRLFGFEL+P+ K      E+ E DESV
Sbjct: 1   MEKDGSSLLSPISDGEHGDS---AGTSV-EKKLRLFGFELDPYKKGESCLKESVERDESV 56

Query: 246 NSSNTVLSLREKPVKEKSPVIGIEDKKYECQFCYKEFANSQALGGHQNAHXXXXXXXXXX 425
           NSSNT  S REKP  EK+  +  EDKK+ECQ+C+KEFANSQALGGHQNAH          
Sbjct: 57  NSSNTDSSGREKPSIEKNSTVEPEDKKFECQYCFKEFANSQALGGHQNAHKKERMKKKRL 116

Query: 426 XXXXXXXTIHQYLQPLQNPNAFSYYGSPAWFYEPSSYSSEFTFIDESQISFNPYDQSANA 605
                  +I+ YLQPLQN ++F+Y+GS  WFY+PS  S +    DESQISF P+DQ A+ 
Sbjct: 117 QLQARKASINHYLQPLQNNHSFTYHGSALWFYDPSCQSPD----DESQISFTPFDQDAHL 172

Query: 606 NRSLHSQSYSLPTHLPDHQ-TCKFSLLQAHGSHENRPAIIRPSP-SLPKKSCK 758
            +S  S+ Y+ P +LP  Q TC F+L    GS +N+PAII+PSP  + K++CK
Sbjct: 173 KKSQFSKWYAPPANLPLQQDTCMFTLTHPDGSGQNKPAIIKPSPLPVSKQNCK 225


>emb|CAN76449.1| hypothetical protein VITISV_029869 [Vitis vinifera]
          Length = 224

 Score =  180 bits (456), Expect = 7e-43
 Identities = 104/206 (50%), Positives = 130/206 (63%), Gaps = 7/206 (3%)
 Frame = +3

Query: 84  MEKGGCDRTNMVSHSWDGDNILNVKTHVAEKKLRLFGFELNPHSK------ETEEGDESV 245
           MEK G    + +S    GD+     T V EKKLRLFGFEL+P+ K      E+ E DESV
Sbjct: 1   MEKDGSXLLSPISDGEHGDS---AGTSV-EKKLRLFGFELDPYKKGESCLKESVERDESV 56

Query: 246 NSSNTVLSLREKPVKEKSPVIGIEDKKYECQFCYKEFANSQALGGHQNAHXXXXXXXXXX 425
           NSSNT  S REKP  EK+  +  EDKK+ECQ+C+KEFANSQALGGHQNAH          
Sbjct: 57  NSSNTDSSGREKPSXEKNSTVEPEDKKFECQYCFKEFANSQALGGHQNAHKKERMKKKRL 116

Query: 426 XXXXXXXTIHQYLQPLQNPNAFSYYGSPAWFYEPSSYSSEFTFIDESQISFNPYDQSANA 605
                  +I+ YLQPLQN ++F+Y+GS  WFY+PS  S +    DESQISF P+DQ A+ 
Sbjct: 117 QLQARKASINHYLQPLQNNHSFTYHGSALWFYDPSCQSPD----DESQISFTPFDQDAHL 172

Query: 606 NRSLHSQSYSLPTHLPDHQ-TCKFSL 680
            +S  S+ Y+ P +LP  Q TC F+L
Sbjct: 173 KKSQFSKWYAPPANLPLQQDTCMFTL 198


>ref|XP_002520214.1| conserved hypothetical protein [Ricinus communis]
           gi|223540706|gb|EEF42269.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 224

 Score =  170 bits (430), Expect = 7e-40
 Identities = 103/222 (46%), Positives = 132/222 (59%), Gaps = 7/222 (3%)
 Frame = +3

Query: 114 MVSHSWDGDNILNVKTHVAEKKLRLFGFELNP-----HSKETEEGDESVNSSNTVLSLRE 278
           ++S S DG+N  + ++ V EKKL+LFGFELNP       K + EGDESVNSSNTV S RE
Sbjct: 8   ILSSSLDGENCHSAESCV-EKKLKLFGFELNPIRNDESCKGSVEGDESVNSSNTVSSERE 66

Query: 279 KPVKEKSPVIGIEDKKYECQFCYKEFANSQALGGHQNAHXXXXXXXXXXXXXXXXXTIHQ 458
           KPVKEKS V   +DKK+ECQ+C+KEFANSQALGGHQNAH                 +I  
Sbjct: 67  KPVKEKSSVGEPDDKKFECQYCFKEFANSQALGGHQNAHKKERMKKKRLQLQARKASISC 126

Query: 459 YLQPLQNPNAFSYYGSPAWFYEPSSYSSEFTFIDESQISFNPYDQSANANRSLHSQSYS- 635
           YLQP QN  +++  GS  WFY+PS  + EFT  +ESQ+                S+ YS 
Sbjct: 127 YLQPFQNNLSYNCQGSTQWFYDPSCSTPEFTLYEESQV----------------SKWYST 170

Query: 636 LPTHLPDHQ-TCKFSLLQAHGSHENRPAIIRPSPSLPKKSCK 758
           +P   P  Q TC F++     + ENRP I +P+    K++CK
Sbjct: 171 VPAQAPFQQDTCMFTITHPERARENRPVIRKPA---SKQTCK 209


>ref|XP_002311864.1| predicted protein [Populus trichocarpa] gi|222851684|gb|EEE89231.1|
           predicted protein [Populus trichocarpa]
          Length = 261

 Score =  160 bits (404), Expect = 8e-37
 Identities = 113/245 (46%), Positives = 143/245 (58%), Gaps = 20/245 (8%)
 Frame = +3

Query: 84  MEKGGCDRTNMVSHSWDGD-NILNVKTHVAEKKLRLFGFELNPHS------KETEEGD-E 239
           MEK G   +NM S   DGD N  + ++   EKKLRLFGFELNP        K   EGD E
Sbjct: 1   MEKEG---SNMFSSILDGDQNGHSAQSCSVEKKLRLFGFELNPCKNNESCVKGCVEGDHE 57

Query: 240 SVNSSNTVLSL-REKPVKEKSPVIG----IEDKKYECQFCYKEFANSQALGGHQNAHXXX 404
           SVNSSNTVLS  REKPVKEKS   G     +DKK+ECQ+C+KEFANSQALGGHQNAH   
Sbjct: 58  SVNSSNTVLSSEREKPVKEKSSSSGHHGPADDKKFECQYCFKEFANSQALGGHQNAHKKE 117

Query: 405 XXXXXXXXXXXXXXTIHQYLQPLQNPNAFSY-YGSPA--WFYEPSSYSS--EFTFIDESQ 569
                         ++  YLQP QN  +++Y YGS    WF++PS  ++  +FT  +ESQ
Sbjct: 118 RLKKKRLQLQARKASLSCYLQPYQNNPSYNYQYGSSTTPWFFDPSCSTTPDQFTLYEESQ 177

Query: 570 ISFNPYDQSANANRSLHSQSYSLPTH-LPDHQTCKFSLLQAHGSHENRPAIIRPSPSL-P 743
           ISFNP + S + N S  S  +++P   +P  Q  ++     H    +R    +PSP L  
Sbjct: 178 ISFNPCEDS-HLNDSQISNWHAVPAQVIPFQQDTRYKFTFTHADQRSRD--YKPSPLLAS 234

Query: 744 KKSCK 758
           KK+CK
Sbjct: 235 KKTCK 239


>ref|NP_001237195.1| uncharacterized protein LOC100527006 [Glycine max]
           gi|255631352|gb|ACU16043.1| unknown [Glycine max]
          Length = 252

 Score =  159 bits (403), Expect = 1e-36
 Identities = 97/212 (45%), Positives = 128/212 (60%), Gaps = 8/212 (3%)
 Frame = +3

Query: 117 VSHSWDGDNILNVKTHVAEKKLRLFGFELNP----HSKETEEGDESVNSSNTVLSLREKP 284
           +S +WDGDN      +  EK+LRLFGFELNP    ++KE+ EGDESVNSSN+V S  +K 
Sbjct: 8   LSPTWDGDN-----GNSTEKRLRLFGFELNPSKDGYAKESGEGDESVNSSNSVSSGGDKT 62

Query: 285 VKEKSPVIGIEDKKYECQFCYKEFANSQALGGHQNAHXXXXXXXXXXXXXXXXXTIHQYL 464
           V+EK      +++K+ECQ+CYKEFANSQALGGHQNAH                 +I++YL
Sbjct: 63  VQEKPSAKDSDERKFECQYCYKEFANSQALGGHQNAH----KKERMKKKRLQLQSINRYL 118

Query: 465 Q-PLQNPNAFSYYGSPAWFYEPSSY-SSEFTFIDESQISFNPYDQSANANRSLHSQSYSL 638
           Q P Q+ + F++     WFY+PS+Y +SEFT  +E QISFN     AN +    S  YSL
Sbjct: 119 QHPFQSKHGFAHPSDTPWFYDPSTYNNSEFTLSEEPQISFNSNVFDANFSCDQKSSWYSL 178

Query: 639 PTHLPDHQ--TCKFSLLQAHGSHENRPAIIRP 728
            +H  + Q  TC F+   A     N P I +P
Sbjct: 179 ASHPSNSQQDTCMFTFSNA---SNNSPFIFKP 207


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