BLASTX nr result

ID: Coptis24_contig00017041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017041
         (1400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [V...   581   e-163
emb|CBI21127.3| unnamed protein product [Vitis vinifera]              581   e-163
ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucum...   571   e-160
ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucum...   570   e-160
ref|XP_002324312.1| predicted protein [Populus trichocarpa] gi|2...   569   e-160

>ref|XP_002285478.2| PREDICTED: cysteinyl-tRNA synthetase-like [Vitis vinifera]
          Length = 571

 Score =  581 bits (1498), Expect = e-163
 Identities = 275/349 (78%), Positives = 312/349 (89%)
 Frame = +2

Query: 2    DKFPEYGQLSGRKLEDNRAGERVTVDSRKRNPADFALWKSTKEGEPFWESPWGPGRPGWH 181
            DKFPEYG+LSGRK+EDNRAGERV VDSRK+NPADFALWK+ K+GEPFW+SPWGPGRPGWH
Sbjct: 219  DKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGWH 278

Query: 182  IECSAMSAAYLGYSFDIHGGGVDLVFPHHENEIAQSCVACNKSNISYWMHNGFVNIDNEK 361
            IECSAMSAAYLGYSFDIHGGG+DLVFPHHENEIAQSC AC +SNISYW+HNGFV ID+EK
Sbjct: 279  IECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSEK 338

Query: 362  MSKSLGNFFTIRQVIDLYHPLAVRLFLMGTHYRSPINYSNEQLESASDRVFYIYQTLHDC 541
            MSKSLGNFFTIRQVID+YHPLA+RLFL+GTHYRSPINYS+ QLESASDRVFYIYQTLHDC
Sbjct: 339  MSKSLGNFFTIRQVIDIYHPLALRLFLIGTHYRSPINYSDVQLESASDRVFYIYQTLHDC 398

Query: 542  EEVLSQHHKAHCKDNIPPATRTCIDKFHNDFEISMLDDLHTPVVLAAMSDPLKTINDLLH 721
            +  + Q      KD++PP    CI+KF+NDF  SM DDLHTPVVLAA+SDPLKTINDLLH
Sbjct: 399  QNAMDQDDMTK-KDSVPPHILDCINKFYNDFLTSMSDDLHTPVVLAALSDPLKTINDLLH 457

Query: 722  TRQGKKEELRIQSLSALEEEIKSVLSVLGLMPTSYAEVLQQLREKALKRAGLQEDEVSQK 901
            TR+GKK+ELR++SL+ALE+ I+ VL++LGLMP SY+E L QLREKALKR+ L ED + QK
Sbjct: 458  TRKGKKQELRLESLAALEKVIRDVLTILGLMPASYSEALLQLREKALKRSKLTEDHILQK 517

Query: 902  IEQRTSARKNKEYERSDAIRKELAEVGIALMDGPKGTFWRPTVPLALQE 1048
            IE+RT ARKNKEYE+SDAIRK+LA VGIALMD P GT WRP +PLALQE
Sbjct: 518  IEERTMARKNKEYEKSDAIRKDLAAVGIALMDSPDGTTWRPAIPLALQE 566


>emb|CBI21127.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  581 bits (1498), Expect = e-163
 Identities = 275/349 (78%), Positives = 312/349 (89%)
 Frame = +2

Query: 2    DKFPEYGQLSGRKLEDNRAGERVTVDSRKRNPADFALWKSTKEGEPFWESPWGPGRPGWH 181
            DKFPEYG+LSGRK+EDNRAGERV VDSRK+NPADFALWK+ K+GEPFW+SPWGPGRPGWH
Sbjct: 122  DKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSPWGPGRPGWH 181

Query: 182  IECSAMSAAYLGYSFDIHGGGVDLVFPHHENEIAQSCVACNKSNISYWMHNGFVNIDNEK 361
            IECSAMSAAYLGYSFDIHGGG+DLVFPHHENEIAQSC AC +SNISYW+HNGFV ID+EK
Sbjct: 182  IECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSNISYWIHNGFVTIDSEK 241

Query: 362  MSKSLGNFFTIRQVIDLYHPLAVRLFLMGTHYRSPINYSNEQLESASDRVFYIYQTLHDC 541
            MSKSLGNFFTIRQVID+YHPLA+RLFL+GTHYRSPINYS+ QLESASDRVFYIYQTLHDC
Sbjct: 242  MSKSLGNFFTIRQVIDIYHPLALRLFLIGTHYRSPINYSDVQLESASDRVFYIYQTLHDC 301

Query: 542  EEVLSQHHKAHCKDNIPPATRTCIDKFHNDFEISMLDDLHTPVVLAAMSDPLKTINDLLH 721
            +  + Q      KD++PP    CI+KF+NDF  SM DDLHTPVVLAA+SDPLKTINDLLH
Sbjct: 302  QNAMDQDDMTK-KDSVPPHILDCINKFYNDFLTSMSDDLHTPVVLAALSDPLKTINDLLH 360

Query: 722  TRQGKKEELRIQSLSALEEEIKSVLSVLGLMPTSYAEVLQQLREKALKRAGLQEDEVSQK 901
            TR+GKK+ELR++SL+ALE+ I+ VL++LGLMP SY+E L QLREKALKR+ L ED + QK
Sbjct: 361  TRKGKKQELRLESLAALEKVIRDVLTILGLMPASYSEALLQLREKALKRSKLTEDHILQK 420

Query: 902  IEQRTSARKNKEYERSDAIRKELAEVGIALMDGPKGTFWRPTVPLALQE 1048
            IE+RT ARKNKEYE+SDAIRK+LA VGIALMD P GT WRP +PLALQE
Sbjct: 421  IEERTMARKNKEYEKSDAIRKDLAAVGIALMDSPDGTTWRPAIPLALQE 469


>ref|XP_004136364.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
          Length = 576

 Score =  571 bits (1471), Expect = e-160
 Identities = 273/355 (76%), Positives = 312/355 (87%)
 Frame = +2

Query: 2    DKFPEYGQLSGRKLEDNRAGERVTVDSRKRNPADFALWKSTKEGEPFWESPWGPGRPGWH 181
            DKFPEYGQLSGRKLEDNRAGERV+VDSRK+NPADFALWKS KEGEPFWESPWGPGRPGWH
Sbjct: 222  DKFPEYGQLSGRKLEDNRAGERVSVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWH 281

Query: 182  IECSAMSAAYLGYSFDIHGGGVDLVFPHHENEIAQSCVACNKSNISYWMHNGFVNIDNEK 361
            IECSAMSA+YLGYSFDIHGGG+DLVFPHHENEIAQSC AC  SN+SYW+HNGFV ID+EK
Sbjct: 282  IECSAMSASYLGYSFDIHGGGMDLVFPHHENEIAQSCAACRTSNVSYWVHNGFVTIDSEK 341

Query: 362  MSKSLGNFFTIRQVIDLYHPLAVRLFLMGTHYRSPINYSNEQLESASDRVFYIYQTLHDC 541
            MSKSLGNFFTIRQVIDLYHPLA+RLFL+GTHYRSPINYS+  LESASDR+FYIYQTL DC
Sbjct: 342  MSKSLGNFFTIRQVIDLYHPLALRLFLLGTHYRSPINYSDLLLESASDRIFYIYQTLDDC 401

Query: 542  EEVLSQHHKAHCKDNIPPATRTCIDKFHNDFEISMLDDLHTPVVLAAMSDPLKTINDLLH 721
              V+SQ  ++  K  I P+    I+KF N F  SM DD+HTPVVLAA+SDPLK INDLLH
Sbjct: 402  RTVISQEDESSFKGPIAPSLVEEINKFSNVFLTSMSDDIHTPVVLAALSDPLKIINDLLH 461

Query: 722  TRQGKKEELRIQSLSALEEEIKSVLSVLGLMPTSYAEVLQQLREKALKRAGLQEDEVSQK 901
            TR+GKK+E R++SL+ALE+ I +VLS+LGLMP SY+E LQQL+EKAL RA +  D+V QK
Sbjct: 462  TRKGKKQEFRMESLAALEKIIGNVLSILGLMPASYSEALQQLKEKALTRAKMTNDQVLQK 521

Query: 902  IEQRTSARKNKEYERSDAIRKELAEVGIALMDGPKGTFWRPTVPLALQEHEVNSS 1066
            IE+R +ARKNKEYE+SD+IR +LA VGI+LMDGP GT WRPTVPLALQEH+ +S+
Sbjct: 522  IEERNAARKNKEYEKSDSIRTDLAAVGISLMDGPNGTTWRPTVPLALQEHQASST 576


>ref|XP_004165629.1| PREDICTED: cysteine--tRNA ligase-like [Cucumis sativus]
          Length = 576

 Score =  570 bits (1469), Expect = e-160
 Identities = 272/355 (76%), Positives = 312/355 (87%)
 Frame = +2

Query: 2    DKFPEYGQLSGRKLEDNRAGERVTVDSRKRNPADFALWKSTKEGEPFWESPWGPGRPGWH 181
            DKFPEYGQLSGRKLEDNRAGERV+VDSRK+NPADFALWKS KEGEPFWESPWGPGRPGWH
Sbjct: 222  DKFPEYGQLSGRKLEDNRAGERVSVDSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWH 281

Query: 182  IECSAMSAAYLGYSFDIHGGGVDLVFPHHENEIAQSCVACNKSNISYWMHNGFVNIDNEK 361
            IECSAMSA+YLGYSFDIHGGG+DLVFPHHENEIAQSC  C  SN+SYW+HNGFV ID+EK
Sbjct: 282  IECSAMSASYLGYSFDIHGGGMDLVFPHHENEIAQSCATCRTSNVSYWVHNGFVTIDSEK 341

Query: 362  MSKSLGNFFTIRQVIDLYHPLAVRLFLMGTHYRSPINYSNEQLESASDRVFYIYQTLHDC 541
            MSKSLGNFFTIRQVIDLYHPLA+RLFL+GTHYRSPINYS+  LESASDR+FYIYQTL DC
Sbjct: 342  MSKSLGNFFTIRQVIDLYHPLALRLFLLGTHYRSPINYSDLLLESASDRIFYIYQTLDDC 401

Query: 542  EEVLSQHHKAHCKDNIPPATRTCIDKFHNDFEISMLDDLHTPVVLAAMSDPLKTINDLLH 721
              V+SQ  ++  K +I P+    I+KF N F  SM DD+HTPVVLAA+SDPLK INDLLH
Sbjct: 402  RTVVSQEDESSFKGSIAPSLVEEINKFSNVFLTSMSDDIHTPVVLAALSDPLKIINDLLH 461

Query: 722  TRQGKKEELRIQSLSALEEEIKSVLSVLGLMPTSYAEVLQQLREKALKRAGLQEDEVSQK 901
            TR+GKK+E R++SL+ALE+ I +VLS+LGLMP SY+E LQQL+EKAL RA +  D+V QK
Sbjct: 462  TRKGKKQEFRMESLAALEKIIGNVLSILGLMPASYSEALQQLKEKALTRAKMTNDQVLQK 521

Query: 902  IEQRTSARKNKEYERSDAIRKELAEVGIALMDGPKGTFWRPTVPLALQEHEVNSS 1066
            IE+R +ARKNKEYE+SD+IR +LA VGI+LMDGP GT WRPTVPLALQEH+ +S+
Sbjct: 522  IEERNAARKNKEYEKSDSIRTDLAAVGISLMDGPNGTTWRPTVPLALQEHQASST 576


>ref|XP_002324312.1| predicted protein [Populus trichocarpa] gi|222865746|gb|EEF02877.1|
            predicted protein [Populus trichocarpa]
          Length = 493

 Score =  569 bits (1467), Expect = e-160
 Identities = 269/355 (75%), Positives = 312/355 (87%)
 Frame = +2

Query: 2    DKFPEYGQLSGRKLEDNRAGERVTVDSRKRNPADFALWKSTKEGEPFWESPWGPGRPGWH 181
            DK PEYG+LSGRKLEDNRAGERV VDSRK+NPADFALWKS KEGEPFW+SPWGPGRPGWH
Sbjct: 139  DKLPEYGRLSGRKLEDNRAGERVAVDSRKKNPADFALWKSAKEGEPFWDSPWGPGRPGWH 198

Query: 182  IECSAMSAAYLGYSFDIHGGGVDLVFPHHENEIAQSCVACNKSNISYWMHNGFVNIDNEK 361
            IECSAMSAAYLG+SFDIHGGG+DLVFPHHENEIAQSC AC  SNISYW+HNGFV ID+EK
Sbjct: 199  IECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIAQSCAACRDSNISYWVHNGFVTIDSEK 258

Query: 362  MSKSLGNFFTIRQVIDLYHPLAVRLFLMGTHYRSPINYSNEQLESASDRVFYIYQTLHDC 541
            MSKSLGNFFTIRQVI+LYHPLA+RLFL+GTHYRSP+NYS+ QLESAS+R+FYIYQTLHDC
Sbjct: 259  MSKSLGNFFTIRQVINLYHPLALRLFLLGTHYRSPVNYSDVQLESASERIFYIYQTLHDC 318

Query: 542  EEVLSQHHKAHCKDNIPPATRTCIDKFHNDFEISMLDDLHTPVVLAAMSDPLKTINDLLH 721
            E +LSQH  A  KD IPP T   I+KFH+    SM DDLHTPV+L+A+SDPLK IND+LH
Sbjct: 319  ENILSQHRVAFEKDAIPPDTINDINKFHDTLVTSMSDDLHTPVLLSALSDPLKIINDMLH 378

Query: 722  TRQGKKEELRIQSLSALEEEIKSVLSVLGLMPTSYAEVLQQLREKALKRAGLQEDEVSQK 901
            TR+GKK+  RI+S++ALE+ +++ L VLGLMP +Y E LQQLREKAL+RA L ED++ QK
Sbjct: 379  TRKGKKQIKRIESIAALEKMVRNALMVLGLMPPTYNEALQQLREKALRRAKLTEDQILQK 438

Query: 902  IEQRTSARKNKEYERSDAIRKELAEVGIALMDGPKGTFWRPTVPLALQEHEVNSS 1066
            IE+RT ARK+K+YE+SDAIRK+LA +GIALMD P GT WRP +PLALQE +V S+
Sbjct: 439  IEERTVARKDKDYEKSDAIRKDLAALGIALMDSPDGTSWRPAIPLALQEQQVAST 493


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