BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00017038
         (1216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17361.3| unnamed protein product [Vitis vinifera]              359   9e-97
ref|XP_002265670.1| PREDICTED: E3 ubiquitin-protein ligase RNF16...   359   9e-97
ref|XP_002327649.1| predicted protein [Populus trichocarpa] gi|2...   300   5e-79
gb|AFW57911.1| putative protease-associated RING zinc finger dom...   283   8e-74
ref|NP_001143559.1| uncharacterized protein LOC100276255 precurs...   283   8e-74

>emb|CBI17361.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score =  359 bits (921), Expect = 9e-97
 Identities = 175/258 (67%), Positives = 208/258 (80%), Gaps = 1/258 (0%)
 Frame = -2

Query: 1113 IVHFKTNSSFSFSFIDAPARFAVRVNTSGVCGALYVSDPLDACSSLRTTLRYEVPEKVRF 934
            IVH K   S S SFIDAPARFAV VN++G+CGAL+++DPL+ACSSL    R +  + ++F
Sbjct: 84   IVHLK---SLSASFIDAPARFAVSVNSTGICGALHLADPLEACSSLLNRFRSQEIDTIKF 140

Query: 933  VLIERGNCAFEDKVRNAQDSGFRAAIVYDNRDKRNLVSMIGSSQRIWVHAVFVSKAAGEA 754
             LI RG CAFEDKVRNAQD+GF A IVYD+RDK NLVSMIG+SQ IWV AVFVSKAAGE 
Sbjct: 141  ALIIRGKCAFEDKVRNAQDAGFHAVIVYDDRDKGNLVSMIGNSQGIWVPAVFVSKAAGET 200

Query: 753  LKKLGQGEEGECC-ITPSLEEAAWTVLVISFISLLVIVSVLATFFFTRDRRLHRQGTYHH 577
            LK   QG+EGECC I PS  E+AWTV+VISFISLLVI +V+ TFF TR+RRL+++GT  H
Sbjct: 201  LKIYAQGQEGECCIINPSFPESAWTVMVISFISLLVIATVVLTFFLTRNRRLNQRGTNPH 260

Query: 576  CPSIDRQIVKVFPCFTFNATCRGGRVTGETCAICLEDYKDGETLRILPCHHEFHTSCVDS 397
             PS+D ++V+V PCFTF+  C      G+TC+ICLEDYKDGE LR+LPC HEFH SCVDS
Sbjct: 261  RPSVDAKLVEVLPCFTFSQACECR--VGDTCSICLEDYKDGERLRVLPCQHEFHASCVDS 318

Query: 396  WLTKWGTFCPVCKHDMST 343
            WLTKWGTFCPVCK+D+ST
Sbjct: 319  WLTKWGTFCPVCKYDLST 336


>ref|XP_002265670.1| PREDICTED: E3 ubiquitin-protein ligase RNF167 [Vitis vinifera]
          Length = 294

 Score =  359 bits (921), Expect = 9e-97
 Identities = 175/258 (67%), Positives = 208/258 (80%), Gaps = 1/258 (0%)
 Frame = -2

Query: 1113 IVHFKTNSSFSFSFIDAPARFAVRVNTSGVCGALYVSDPLDACSSLRTTLRYEVPEKVRF 934
            IVH K   S S SFIDAPARFAV VN++G+CGAL+++DPL+ACSSL    R +  + ++F
Sbjct: 26   IVHLK---SLSASFIDAPARFAVSVNSTGICGALHLADPLEACSSLLNRFRSQEIDTIKF 82

Query: 933  VLIERGNCAFEDKVRNAQDSGFRAAIVYDNRDKRNLVSMIGSSQRIWVHAVFVSKAAGEA 754
             LI RG CAFEDKVRNAQD+GF A IVYD+RDK NLVSMIG+SQ IWV AVFVSKAAGE 
Sbjct: 83   ALIIRGKCAFEDKVRNAQDAGFHAVIVYDDRDKGNLVSMIGNSQGIWVPAVFVSKAAGET 142

Query: 753  LKKLGQGEEGECC-ITPSLEEAAWTVLVISFISLLVIVSVLATFFFTRDRRLHRQGTYHH 577
            LK   QG+EGECC I PS  E+AWTV+VISFISLLVI +V+ TFF TR+RRL+++GT  H
Sbjct: 143  LKIYAQGQEGECCIINPSFPESAWTVMVISFISLLVIATVVLTFFLTRNRRLNQRGTNPH 202

Query: 576  CPSIDRQIVKVFPCFTFNATCRGGRVTGETCAICLEDYKDGETLRILPCHHEFHTSCVDS 397
             PS+D ++V+V PCFTF+  C      G+TC+ICLEDYKDGE LR+LPC HEFH SCVDS
Sbjct: 203  RPSVDAKLVEVLPCFTFSQACECR--VGDTCSICLEDYKDGERLRVLPCQHEFHASCVDS 260

Query: 396  WLTKWGTFCPVCKHDMST 343
            WLTKWGTFCPVCK+D+ST
Sbjct: 261  WLTKWGTFCPVCKYDLST 278


>ref|XP_002327649.1| predicted protein [Populus trichocarpa] gi|222836734|gb|EEE75127.1|
            predicted protein [Populus trichocarpa]
          Length = 311

 Score =  300 bits (768), Expect = 5e-79
 Identities = 146/250 (58%), Positives = 182/250 (72%)
 Frame = -2

Query: 1083 SFSFIDAPARFAVRVNTSGVCGALYVSDPLDACSSLRTTLRYEVPEKVRFVLIERGNCAF 904
            S SF D PA+ A+ +N S VCG+L+V++PLDACS LR   R+E  E  RF LI RG CAF
Sbjct: 31   SISFPDLPAKSALSLNGSSVCGSLHVANPLDACSPLRN--RFEFNESGRFALIVRGECAF 88

Query: 903  EDKVRNAQDSGFRAAIVYDNRDKRNLVSMIGSSQRIWVHAVFVSKAAGEALKKLGQGEEG 724
            EDK++NAQ +GFRAAIV+D++D RNL+ M+ + + I VHAVFV+K AGE LK   +G+EG
Sbjct: 89   EDKIKNAQSAGFRAAIVFDDKDNRNLIYMMVNPEGIKVHAVFVTKYAGEILKDRARGKEG 148

Query: 723  ECCITPSLEEAAWTVLVISFISLLVIVSVLATFFFTRDRRLHRQGTYHHCPSIDRQIVKV 544
            ECCI  S  +AAWTVL IS IS++VI+ +L   F T    LH Q T + C S+D ++V+ 
Sbjct: 149  ECCIYSSRTDAAWTVLAISLISVVVILGLLILVFVTPRHWLHWQRTNNRCKSVDSKMVEA 208

Query: 543  FPCFTFNATCRGGRVTGETCAICLEDYKDGETLRILPCHHEFHTSCVDSWLTKWGTFCPV 364
             PCFTF          GETCAICLEDYKDGE L++LPCHHEFH++CVDSWLTKWGTFCPV
Sbjct: 209  LPCFTFRNASLSQCHVGETCAICLEDYKDGEVLKVLPCHHEFHSTCVDSWLTKWGTFCPV 268

Query: 363  CKHDMSTATA 334
            CK DM   +A
Sbjct: 269  CKLDMKDKSA 278


>gb|AFW57911.1| putative protease-associated RING zinc finger domain family protein
            [Zea mays]
          Length = 296

 Score =  283 bits (723), Expect = 8e-74
 Identities = 132/250 (52%), Positives = 180/250 (72%)
 Frame = -2

Query: 1095 NSSFSFSFIDAPARFAVRVNTSGVCGALYVSDPLDACSSLRTTLRYEVPEKVRFVLIERG 916
            +++FSF+F+DAPARF  RV+  G+CG+L  +DP +AC +++         +  FVLI RG
Sbjct: 44   STTFSFTFLDAPARFGPRVSGDGICGSLRAADPAEACETIKDRGGRRGAGRKAFVLIARG 103

Query: 915  NCAFEDKVRNAQDSGFRAAIVYDNRDKRNLVSMIGSSQRIWVHAVFVSKAAGEALKKLGQ 736
            NC+FE+KVR AQ +GF A+IVYD+ +K +L SM+G S  I + A+FVSK AGE LKK  +
Sbjct: 104  NCSFEEKVRAAQQAGFDASIVYDDEEKASLYSMVGESDGIHIPAIFVSKMAGETLKKFAR 163

Query: 735  GEEGECCITPSLEEAAWTVLVISFISLLVIVSVLATFFFTRDRRLHRQGTYHHCPSIDRQ 556
            GE+ ECCI  S++E A TVLV+SF+SL+VI+SVLA+F F R+ RL R G  +H P + +Q
Sbjct: 164  GEDEECCINSSMDETAGTVLVMSFVSLVVIMSVLASFLFARNCRLLRHGVDNHPPYVKKQ 223

Query: 555  IVKVFPCFTFNATCRGGRVTGETCAICLEDYKDGETLRILPCHHEFHTSCVDSWLTKWGT 376
            +V+ FPC  ++A C       E CAICLEDY +G+ LR LPC HEFH  C+DSWLTKWG 
Sbjct: 224  VVEKFPCSAYSAPCSSEDNFQEACAICLEDYNNGDMLRHLPCKHEFHKICIDSWLTKWGI 283

Query: 375  FCPVCKHDMS 346
            FCP+CK +++
Sbjct: 284  FCPICKLEVT 293


>ref|NP_001143559.1| uncharacterized protein LOC100276255 precursor [Zea mays]
            gi|195622502|gb|ACG33081.1| hypothetical protein [Zea
            mays]
          Length = 276

 Score =  283 bits (723), Expect = 8e-74
 Identities = 132/250 (52%), Positives = 180/250 (72%)
 Frame = -2

Query: 1095 NSSFSFSFIDAPARFAVRVNTSGVCGALYVSDPLDACSSLRTTLRYEVPEKVRFVLIERG 916
            +++FSF+F+DAPARF  RV+  G+CG+L  +DP +AC +++         +  FVLI RG
Sbjct: 24   STTFSFTFLDAPARFGPRVSGDGICGSLRAADPAEACETIKDRGGRRGAGRKAFVLIARG 83

Query: 915  NCAFEDKVRNAQDSGFRAAIVYDNRDKRNLVSMIGSSQRIWVHAVFVSKAAGEALKKLGQ 736
            NC+FE+KVR AQ +GF A+IVYD+ +K +L SM+G S  I + A+FVSK AGE LKK  +
Sbjct: 84   NCSFEEKVRAAQQAGFDASIVYDDEEKASLYSMVGESDGIHIPAIFVSKMAGETLKKFAR 143

Query: 735  GEEGECCITPSLEEAAWTVLVISFISLLVIVSVLATFFFTRDRRLHRQGTYHHCPSIDRQ 556
            GE+ ECCI  S++E A TVLV+SF+SL+VI+SVLA+F F R+ RL R G  +H P + +Q
Sbjct: 144  GEDEECCINSSMDETAGTVLVMSFVSLVVIMSVLASFLFARNCRLLRHGVDNHPPYVKKQ 203

Query: 555  IVKVFPCFTFNATCRGGRVTGETCAICLEDYKDGETLRILPCHHEFHTSCVDSWLTKWGT 376
            +V+ FPC  ++A C       E CAICLEDY +G+ LR LPC HEFH  C+DSWLTKWG 
Sbjct: 204  VVEKFPCSAYSAPCSSEDNFQEACAICLEDYNNGDMLRHLPCKHEFHKICIDSWLTKWGI 263

Query: 375  FCPVCKHDMS 346
            FCP+CK +++
Sbjct: 264  FCPICKLEVT 273